;Computational Prediction of Promoters in the Escherichia coli genome. ;Author: Araceli M. Huerta (amhuerta@ccg.unam.mx) ;Pleace cite: A.M. Huerta, J. Collado-Vides, J Mol Biol. 333:261-78 (2003). ;File Title: Sigma70, Sigma24, Sigma28, Sigma32, Sigma38, & Sigma54 promoter predictions in E. coli K12. ;Predictions were done in E. coli K12 from the NCBI version: NC_000913.2 (13-FEB-2011) ;Predictions were calibrated using RegulonDB Version 7.0 (http://regulondb.ccg.unam.mx), ;that does correspond to Ecocyc version 14.5 ;The data would be distributed following the Licence: http://regulondb.ccg.unam.mx/menu/download/full_version/license_regulondb_registration.jsp ; ;The data contain 4342 Sigma70 promoter predictions: lowest score = 1.334 (P-value = 0.000850233109777606), highest score = 6.726 (P-value = 1.44124966379965e-06) ;The data contain 3964 Sigma38 promoter predictions: lowest score = 2.48 (P-value = 0.0139817831594055), highest score = 7.31 (P-value = 1.34034288573999e-05) ;The data contain 752 Sigma32 promoter predictions: lowest score = 1.865 (P-value = 0.000248516827317573), highest score = 10.953 (P-value = 6.30082606126306e-08) ;The data contain 524 Sigma24 promoter predictions: lowest score = -3.810 (P-value = 0.000106219802845229), highest score = 9.705 (P-value = 1.01563147242684e-06) ;The data contain 212 Sigma28 promoter predictions: lowest score = 2.996 (P-value = 8.87222371802212e-05), highest score = 14.789 (P-value = 6.00904502872066e-09) ;The data contain 79 Sigma54 promoter predictions: lowest score = 0.480 (P-value = 3.58052901567964e-06), highest score = 12.405 (P-value = 1.83692991299296e-07) ;Promoter Predictions can be read in http://www.ccg.unam.mx/Computational_Genomics/PromoterTools ;--------------------------------------------------------------------------------------- ;(1)Lend (2)Rend (3)Strand (4)Gene (5)Promoter_Name (6)Sigma (7)-35Box_Lend (8)-35Box_Rend (9)-35Box (10)Spacer (11)-10Box_Lend (12)-10Box_Rend (13)-10Box (14)Pos_1 (15)Score (16)Homology_Level (17)P-value (18)Signicance_Level (19)Evidence (20)EvidenceType (21)Sequence 5683 6459 R yaaA yaaAp1 Sigma38 0 6565 6572 GCCAGCTT 6559 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggtcGCCAGCTTtctccGgacgc 6529 7959 R yaaJ yaaJp2 Sigma38 0 8023 8030 TATATACT 8017 3.27 poor homology 0.006874063 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagcgTATATACTtcttaAacaat 6529 7959 R yaaJ yaaJp3 Sigma38 0 8124 8131 GCGAGACT 8118 3.73 good homology 0.004127844 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gccagGCGAGACTgtttcGgattt 6529 7959 R yaaJ yaaJp5 Sigma38 0 8055 8062 GCTACGCA 8048 4.57 high homology 0.001533811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtatGCTACGCAgaagttAtcaag 9306 9893 F mog mogp3 Sigma38 0 9114 9121 GATAAACT 9127 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagtaGATAAACTggcggAaggta 9928 10494 R yaaH yaaHp3 Sigma38 0 10591 10598 TAGACACT 10585 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatcgTAGACACTgccccActggc 10643 11356 R yaaW yaaWp2 Sigma38 0 11373 11380 GCCAGAAT 11367 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctaacGCCAGAATatagaAgccac 10643 11356 R yaaW yaaWp4 Sigma38 0 11404 11411 GCCACGCT 11399 4.53 high homology 0.001580522 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgGCCACGCTgaaaAttatc 15445 16557 F insL insLp2 Sigma38 0 15397 15404 GCTAACTT 15409 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taagcGCTAACTTaaggGttgtg 15445 16557 F insL insLp4 Sigma38 0 15294 15301 GCTAACCT 15307 4.66 high homology 0.001387849 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacccGCTAACCTccccaAaagcc 16751 16903 R hokC hokCp2 Sigma38 0 17123 17130 GCCACAAA 17117 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attacGCCACAAAaatgcGaggcg 16751 16903 R hokC hokCp3 Sigma38 0 17060 17067 GATATAAT 17055 3.31 poor homology 0.006670903 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agagcGATATAATagcgGcgggt 16952 17006 F sokC sokCp4 Sigma38 0 16875 16882 GCGACAAT 16887 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggGCGACAATcatcGcctta 19811 20314 R insB insBp1 Sigma38 0 20547 20554 GCCAACTT 20542 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgctGCCAACTTactgAtttag 27293 28207 F rihC rihCp3 Sigma38 0 27249 27256 GCGAAAAT 27261 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttatGCGAAAATgccgGtcttg 27293 28207 F rihC rihCp4 Sigma38 0 27239 27246 CCTAAGTT 27252 2.66 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcagCCTAAGTTatgcgAaaatg 34781 35371 R caiE caiEp6 Sigma38 0 35485 35492 GCTATATT 35480 5.25 high homology 0.000593188 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtatcGCTATATTcgcaGcggcg 47246 47776 F kefF kefFp3 Sigma38 0 47201 47208 ACTACACT 47214 5.47 high homology 0.000405658 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgACTACACTttgtgGgaaaa 50380 51222 R apaH apaHp6 Sigma38 0 51268 51275 TCGACATT 51262 3.69 good homology 0.004427147 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcaTCGACATTcccgtAttccg 50380 51222 R apaH apaHp7 Sigma38 0 51239 51246 CCCACACT 51233 4.08 good homology 0.002879899 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgttCCCACACTcattcAttaaa 57364 58179 F djlA djlAp4 Sigma38 0 57275 57282 CCCACAAT 57288 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgtCCCACAATtgaccGcagcc 57364 58179 F djlA djlAp5 Sigma38 0 57183 57190 TCTACGCT 57197 5.4 high homology 0.000461975 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatcTCTACGCTagtgttAatcct 59687 60346 R rluA rluAp4 Sigma38 0 60512 60519 GCCGAGCT 60506 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtctGCCGAGCTgtctcGtctgg 59687 60346 R rluA rluAp5 Sigma38 0 60381 60388 CCTGCGTT 60375 3.83 good homology 0.003735028 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgcCCTGCGTTtgatcGttgta 59687 60346 R rluA rluAp6 Sigma38 0 60386 60393 GATGCCCT 60379 4.21 good homology 0.002265409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtctgGATGCCCTgcgtttGatcgt 65855 66550 R araD araDp1 Sigma38 0 66628 66635 GCGACGCT 66622 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCGACGCTggcgcGtctta 65855 66550 R araD araDp2 Sigma38 0 66713 66720 GCGACGCT 66707 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCGACGCTggcgcGtctta 78848 79453 R leuD leuDp1 Sigma38 0 79470 79477 GCAACATT 79464 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattcGCAACATTaaataAggagc 78848 79453 R leuD leuDp2 Sigma38 0 79479 79486 CCGACATT 79474 3 poor homology 0.008738646 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttcgCCGACATTcgcaAcatta 78848 79453 R leuD leuDp3 Sigma38 0 79684 79691 GATAAAAT 79679 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtctgGATAAAATctttAttgaa 88028 89032 F fruR fruRp3 Sigma38 0 87780 87787 GCGAAAAT 87793 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgtgGCGAAAATtgtggAggttg 88028 89032 F fruR fruRp5 Sigma38 0 88003 88010 TTTACATT 88015 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggttTTTACATTttacGcaagg 88028 89032 F fruR fruRp6 Sigma38 0 87831 87838 GATAAAAT 87844 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcggcGATAAAATaatgcGttgag 107705 108217 F secM secMp6 Sigma38 0 107474 107481 ACGACATT 107488 2.68 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcataACGACATTtatactGtcgta 107705 108217 F secM secMp7 Sigma38 0 107567 107574 GCTATAAA 107580 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taagaGCTATAAAaaacgGtgcga 107705 108217 F secM secMp9 Sigma38 0 107668 107675 GCTAAATA 107681 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtgcGCTAAATAcgtttGaatat 113444 114487 F guaC guaCp5 Sigma38 0 113279 113286 GCGAAATT 113292 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaaaGCGAAATTgatgaAacgtt 117752 118645 R nadC nadCp1 Sigma38 0 118836 118843 GCTAATAT 118830 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcagGCTAATATtgtgcAccacc 117752 118645 R nadC nadCp2 Sigma38 0 118857 118864 GCCAAACT 118851 4.02 good homology 0.003057982 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggaccGCCAAACTcgcctGgcggc 117752 118645 R nadC nadCp4 Sigma38 0 118675 118682 TCTACCTT 118670 4.94 high homology 0.000921047 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgttTCTACCTTatgaTtcgtt 118733 119284 F ampD ampDp4 Sigma38 0 118688 118695 GCTACTCT 118701 4.98 high homology 0.000893825 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacatGCTACTCTgaaccGggtat 134788 135582 R speD speDp5 Sigma38 0 135817 135824 GCGACGTT 135810 3.45 poor homology 0.005516564 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttcaGCGACGTTggctttTatcag 142779 143705 F yadG yadGp2 Sigma38 0 142707 142714 GCTAATAT 142720 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttgGCTAATATagggcAactcc 144577 145017 F yadI yadIp2 Sigma38 0 144383 144390 ACTACCTT 144395 3.93 good homology 0.003379593 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggtcACTACCTTtggcGtactg 145081 146310 F yadE yadEp4 Sigma38 0 145041 145048 GCTACAAT 145053 6.51 high homology 6.13E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttttGCTACAATaaaaGcgttg 146314 146694 R panD panDp2 Sigma38 0 146782 146789 TAGACACT 146776 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgagTAGACACTaaacaAaaatc 146968 147870 F yadD yadDp1 Sigma38 0 146786 146793 TCTACTCA 146798 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagtgTCTACTCAtctgAcggca 147944 148795 R panC panCp1 Sigma38 0 148907 148914 GCTAAAAA 148900 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattcGCTAAAAAtttcctCgccga 147944 148795 R panC panCp3 Sigma38 0 148916 148923 CCTAAATT 148910 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acattCCTAAATTcgctaAaaatt 152829 155426 R htrE htrEp3 Sigma38 0 155465 155472 GCCAGGCT 155458 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaatGCCAGGCTgtaatcAggcaa 152829 155426 R htrE htrEp4 Sigma38 0 155444 155451 GATATAAT 155438 3.31 poor homology 0.006670903 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaagGATATAATtccgcAggaag 156299 156883 R yadN yadNp2 Sigma38 0 156963 156970 TCTAACAT 156957 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taataTCTAACATttgttTctcct 156299 156883 R yadN yadNp3 Sigma38 0 157114 157121 CATACCCT 157108 3.1 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctcCATACCCTaaccaAttgca 157253 157732 R folK folKp2 Sigma38 0 157937 157944 CCTAAGTT 157932 2.66 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcatCCTAAGTTccgtGcggct 161501 162031 R ligT ligTp1 Sigma38 0 162206 162213 GCCAGGTT 162200 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggcaGCCAGGTTgatttCccggc 161501 162031 R ligT ligTp3 Sigma38 0 162067 162074 GCCACATT 162061 5.13 high homology 0.000746586 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgcGCCACATTgtagcAtcgcg 162105 164534 F hrpB hrpBp2 Sigma38 0 162062 162069 GCTACAAT 162075 6.51 high homology 6.13E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgatGCTACAATgtggcGcgaag 175107 176528 F clcA clcAp5 Sigma38 0 174923 174930 TCTATGTT 174935 3.35 poor homology 0.00628242 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctatTCTATGTTattcAtaaca 175107 176528 F clcA clcAp6 Sigma38 0 174918 174925 GCTATTCT 174931 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctGCTATTCTatgttAttcat 175107 176528 F clcA clcAp8 Sigma38 0 174915 174922 GCTGCTAT 174928 3.77 good homology 0.003965989 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatgGCTGCTATtctatGttatt 177001 177624 R yadS yadSp4 Sigma38 0 177792 177799 CCTAAAAT 177786 3.41 poor homology 0.00585769 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaattCCTAAAATcaaacAatact 183709 184095 R yaeH yaeHp2 Sigma38 0 184332 184339 TCTACACA 184327 4.82 high homology 0.001206538 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acacaTCTACACAacccGtggcg 183709 184095 R yaeH yaeHp3 Sigma38 0 184131 184138 GCTAAAAT 184126 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caaatGCTAAAATaagcAcaatt 192872 193429 F frr frrp2 Sigma38 0 192737 192744 GCCAAAAT 192750 3.23 poor homology 0.007372488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgggGCCAAAATggcaaAtaaaa 192872 193429 F frr frrp7 Sigma38 0 192800 192807 GCTATACT 192812 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggGCTATACTtagcAcactt 195677 196534 F cdsA cdsAp4 Sigma38 0 195536 195543 GCCGAACT 195550 3.61 good homology 0.004892754 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctatGCCGAACTttacttTacaga 211877 212266 F yaeR yaeRp1 Sigma38 0 211816 211823 GATAACTT 211829 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcggGATAACTTgccagAgcggc 211877 212266 F yaeR yaeRp2 Sigma38 0 211727 211734 GCAACATT 211740 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcggGCAACATTaccccGgtttt 213678 213932 R rof rofp2 Sigma38 0 213964 213971 CATACGCT 213958 3.09 poor homology 0.008066787 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcagCATACGCTgcggcAaactt 213678 213932 R rof rofp4 Sigma38 0 214057 214064 GATACGTT 214052 4.14 good homology 0.002658482 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttagGATACGTTccggAcgcgc 214291 214836 F yaeQ yaeQp2 Sigma38 0 214255 214262 GTTACAAT 214268 3.69 good homology 0.004383096 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attccGTTACAATggcctCctgat 214291 214836 F yaeQ yaeQp4 Sigma38 0 214209 214216 ACCACACT 214223 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actatACCACACTcatttcTgcaat 214291 214836 F yaeQ yaeQp5 Sigma38 0 214181 214188 GATAAACT 214195 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgaaGATAAACTctgtttCgcaag 218887 219594 R yaeB yaeBp2 Sigma38 0 219777 219784 GCGACTCT 219771 2.67 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagtgGCGACTCTtgccaGgcctc 218887 219594 R yaeB yaeBp3 Sigma38 0 219644 219651 GCCAGGCT 219637 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtacGCCAGGCTgctatcGtcagg 218887 219594 R yaeB yaeBp4 Sigma38 0 219700 219707 TCTAAAAT 219695 4.1 good homology 0.002851244 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgccTCTAAAATgaaaGccaat 220113 220928 R metQ metQp4 Sigma38 0 221076 221083 GCTACATC 221071 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtatgGCTACATCggctAtaacg 232597 233955 R mltD mltDp2 Sigma38 0 234031 234038 GATAGGTT 234025 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaaaGATAGGTTctgatAaaact 234027 234782 R gloB gloBp4 Sigma38 0 234932 234939 CATACATT 234926 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaacCATACATTttagtGaacca 234816 235538 F yafS yafSp1 Sigma38 0 234700 234707 TCGACAAT 234713 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgggaTCGACAATcaggcAgcgac 237335 238120 F yafT yafTp3 Sigma38 0 237291 237298 GCTAAATA 237304 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaatGCTAAATAttctaAtcatt 240343 240816 F ivy ivyp2 Sigma38 0 240319 240326 GCCAGGCT 240332 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcGCCAGGCTttaggAggtta 243543 244121 F lpcA lpcAp5 Sigma38 0 243420 243427 GCTGTTTT 243433 2.51 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgttGCTGTTTTtatccGcactt 243543 244121 F lpcA lpcAp6 Sigma38 0 243386 243393 TTTACAAT 243400 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgTTTACAATataattAcaaca 243543 244121 F lpcA lpcAp7 Sigma38 0 243497 243504 GGTACACT 243511 3 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatccGGTACACTgcatttTgtcta 243543 244121 F lpcA lpcAp11 Sigma38 0 243430 243437 TCCGCACT 243442 4.36 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttaTCCGCACTtcagGtcaaa 243543 244121 F lpcA lpcAp12 Sigma38 0 243502 243509 ACTGCATT 243516 4.58 high homology 0.001518549 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtacACTGCATTttgtctAttaca 244327 245094 F yafJ yafJp2 Sigma38 0 244208 244215 CCTACAAA 244221 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatgCCTACAAAtctgtAcgcga 244327 245094 F yafJ yafJp3 Sigma38 0 244184 244191 GCGACGCT 244197 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCGACGCTgacgcGtctta 245065 245805 R yafK yafKp4 Sigma38 0 245871 245878 TCCAGACT 245865 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaaaTCCAGACTattccGatttg 245065 245805 R yafK yafKp5 Sigma38 0 246007 246014 GATAAACT 246001 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaccGATAAACTtttacGatttg 245961 246239 R yafQ yafQp1 Sigma38 0 246341 246348 GCGAGCCT 246335 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttacGCGAGCCTaatcaAttaac 245961 246239 R yafQ yafQp4 Sigma38 0 246252 246259 GATAAATT 246247 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatttGATAAATTaggaAtttaa 246712 247461 F yafL yafLp1 Sigma38 0 246679 246686 GCAACATT 246692 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acactGCAACATTaaagcAtgacc 246712 247461 F yafL yafLp5 Sigma38 0 246562 246569 GCGACAAT 246575 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caacaGCGACAATccatgAgtaat 246712 247461 F yafL yafLp7 Sigma38 0 246671 246678 GATACACT 246684 5.69 high homology 0.000288735 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccggGATACACTgcaacAttaaa 247637 248134 F yafM yafMp6 Sigma38 0 247592 247599 GCCAACCT 247605 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcattGCCAACCTttcctTttctt 247637 248134 F yafM yafMp7 Sigma38 0 247513 247520 GCGACGCT 247526 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCGACGCTggcgcGtctta 259612 260715 F proB proBp2 Sigma38 0 259517 259524 GCCATGCT 259531 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaacGCCATGCTttgctcGcagat 259612 260715 F proB proBp4 Sigma38 0 259588 259595 CCTAAAAT 259601 3.41 poor homology 0.00585769 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttCCTAAAATtgaatGgcaga 259612 260715 F proB proBp7 Sigma38 0 259412 259419 GATATATT 259424 3.63 good homology 0.004748151 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaGATATATTacagAttaat 259612 260715 F proB proBp10 Sigma38 0 259487 259494 GCTAGGCT 259500 4.98 high homology 0.000902809 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgccGCTAGGCTtgctgAtcccg 262552 262893 R ykfI ykfIp1 Sigma38 0 263125 263132 GCCAGCAT 263119 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accggGCCAGCATcaccgGcaagt 262552 262893 R ykfI ykfIp3 Sigma38 0 262963 262970 GACACCCT 262957 2.92 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagccGACACCCTtggcaGttgcg 262552 262893 R ykfI ykfIp4 Sigma38 0 262999 263006 GTTACCCT 262993 3.42 poor homology 0.005572007 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgcGTTACCCTgtaccAcaacg 262552 262893 R ykfI ykfIp6 Sigma38 0 262944 262951 GCTACGTA 262937 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgcgGCTACGTAtacatcGccatt 268513 269406 R perR perRp1 Sigma38 0 269445 269452 GCCAAATT 269439 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggtgGCCAAATTcagtaAaccac 273325 274341 R insH insHp3 Sigma38 0 274400 274407 GATACAAA 274395 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcaGATACAAAaaggGccgcc 273325 274341 R insH insHp4 Sigma38 0 274518 274525 TCTAAACA 274512 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggacaTCTAAACAtccaaAgaagg 274549 275952 F mmuP mmuPp4 Sigma38 0 274530 274537 CATACGTT 274543 2.62 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgtcCATACGTTtagaaGgttat 281481 282410 F yagE yagEp2 Sigma38 0 281313 281320 GCCATCTT 281326 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accgaGCCATCTTttcccCctcgc 281481 282410 F yagE yagEp4 Sigma38 0 281463 281470 TCTATAAT 281476 4.1 good homology 0.002822873 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctgtTCTATAATgtagaAcaaaa 281481 282410 F yagE yagEp7 Sigma38 0 281238 281245 TCTACCAT 281252 4.62 high homology 0.001444488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtgTCTACCATgtccccGaacaa 284619 286001 F yagG yagGp2 Sigma38 0 284561 284568 ATTACACT 284574 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agctcATTACACTccattAacacg 284619 286001 F yagG yagGp4 Sigma38 0 284597 284604 ACTACATA 284610 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcacACTACATAagggtGtaatt 289873 290376 R insB insBp1 Sigma38 0 290609 290616 GCCAACTT 290604 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgctGCCAACTTactgAtttag 291546 292172 R yagK yagKp4 Sigma38 0 292277 292284 ACTAAAAT 292271 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccgtACTAAAATctgatAccagt 291546 292172 R yagK yagKp7 Sigma38 0 292386 292393 GCTACCTT 292379 5.77 high homology 0.000218221 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgggGCTACCTTcgtctcAaattt 292444 293142 R yagL yagLp3 Sigma38 0 293189 293196 CCCATACT 293183 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataaaCCCATACTcacaaGagagc 292444 293142 R yagL yagLp6 Sigma38 0 293384 293391 TCTACTCT 293378 4.15 good homology 0.002605841 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggcTCTACTCTtgtcaAcatcc 294363 294803 R yagN yagNp6 Sigma38 0 294816 294823 ACTACACA 294811 3.81 good homology 0.00381048 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcaACTACACAggagAtaagc 294363 294803 R yagN yagNp7 Sigma38 0 294864 294871 GATAGATT 294858 3.95 good homology 0.003312673 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcaaGATAGATTttcatGtatcg 294920 296320 R intF intFp5 Sigma38 0 296543 296550 GTTACAAT 296537 3.69 good homology 0.004383096 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaagGTTACAATggcacAaatac 296994 297950 R paoD paoDp1 Sigma38 0 297976 297983 GATAAGCT 297970 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctcGATAAGCTgccggAtgtgg 296994 297950 R paoD paoDp2 Sigma38 0 297988 297995 GATAAGCT 297982 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctctgGATAAGCTgctcgAtaagc 302215 302829 F yagU yagUp3 Sigma38 0 302146 302153 TTTACATT 302160 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agttcTTTACATTtgccttGtttta 303719 304429 R yagV yagVp3 Sigma38 0 304626 304633 CCTACGAT 304620 3.92 good homology 0.003447865 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaCCTACGATgccggGtgcga 303719 304429 R yagV yagVp4 Sigma38 0 304636 304643 GCTACAAA 304630 4.85 high homology 0.001136275 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acggaGCTACAAAaacctAcgatg 303719 304429 R yagV yagVp5 Sigma38 0 304666 304673 GCGACACT 304659 4.99 high homology 0.000800719 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcccgGCGACACTttccttTattac 309308 309895 R matB matBp3 Sigma38 0 310001 310008 GCCAAGCT 309994 2.95 poor homology 0.009186686 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgagGCCAAGCTgtactcAaaaat 309308 309895 R matB matBp6 Sigma38 0 310127 310134 GATAAAAT 310121 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaaaGATAAAATcacggAccggg 309308 309895 R matB matBp7 Sigma38 0 310058 310065 GCCAGAAT 310052 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgattGCCAGAATtgaaaAttgta 309970 310560 R matA matAp4 Sigma38 0 310756 310763 TCTAAATA 310751 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttttTCTAAATAttgaCttaac 311336 311563 F ykgL ykgLp5 Sigma38 0 311303 311310 ACCACATT 311315 3.29 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatttACCACATTtatcAtctta 311336 311563 F ykgL ykgLp6 Sigma38 0 311116 311123 GCCAGATT 311129 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caagaGCCAGATTaagtgAagtta 311598 311738 R ykgO ykgOp3 Sigma38 0 311828 311835 TCTATACA 311822 3.24 poor homology 0.007154598 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccgtTCTATACAgggaaGctgag 316950 317543 R ykgB ykgBp5 Sigma38 0 317760 317767 GCAACACT 317755 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatttGCAACACTattaTctggc 316950 317543 R ykgB ykgBp6 Sigma38 0 317715 317722 GATAAAAT 317708 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagatGATAAAATaattctGaaaca 316950 317543 R ykgB ykgBp8 Sigma38 0 317652 317659 GATACCAT 317646 3.82 good homology 0.003735028 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggagGATACCATtgctgAtatag 320832 321551 F ykgE ykgEp4 Sigma38 0 320731 320738 GCTAGCCA 320744 3.32 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgttGCTAGCCAattaaAaaaga 320832 321551 F ykgE ykgEp5 Sigma38 0 320752 320759 GCCATATT 320765 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaacGCCATATTtattgAtgatt 324801 326471 R betA betAp3 Sigma38 0 326575 326582 CCGGCATT 326570 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acactCCGGCATTggtcGcgaga 324801 326471 R betA betAp4 Sigma38 0 326489 326496 TCCATATT 326482 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccagTCCATATTctaaccAggagg 324801 326471 R betA betAp6 Sigma38 0 326587 326594 GCTACAAA 326580 4.85 high homology 0.001136275 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcgGCTACAAAcactccGgcatt 324801 326471 R betA betAp8 Sigma38 0 326501 326508 GCTAAATT 326496 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agatgGCTAAATTccagTccata 332725 333657 R yahB yahBp3 Sigma38 0 333702 333709 TCTACAGT 333697 2.79 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataccTCTACAGTcataGctgga 332725 333657 R yahB yahBp4 Sigma38 0 333664 333671 GCGAGAAT 333658 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taatgGCGAGAATggtttAatgaa 332725 333657 R yahB yahBp7 Sigma38 0 333721 333728 TCTATCTT 333715 3.36 poor homology 0.00615802 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattaTCTATCTTtaaccGatacc 333749 334246 R yahC yahCp6 Sigma38 0 334328 334335 GATACCCT 334323 4.62 high homology 0.001430116 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacccGATACCCTttcaCtcaat 334504 335109 F yahD yahDp2 Sigma38 0 334480 334487 GCCACAAA 334493 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaacaGCCACAAAaaccaGgggaa 334504 335109 F yahD yahDp4 Sigma38 0 334456 334463 GCTATTCT 334470 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgttGCTATTCTcaattcAtcgaa 334504 335109 F yahD yahDp6 Sigma38 0 334278 334285 GCTACTCT 334291 4.98 high homology 0.000893825 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaaaGCTACTCTtacatGtgcag 339389 340339 F yahI yahIp1 Sigma38 0 339208 339215 GCGAGAAT 339221 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtggcGCGAGAATctgtaGgcctg 339389 340339 F yahI yahIp2 Sigma38 0 339301 339308 GCGAGAAT 339314 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtggcGCGAGAATtgtagGcctga 342108 343157 F yahK yahKp3 Sigma38 0 342028 342035 GCTATATT 342041 5.25 high homology 0.000593188 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattgGCTATATTcaatgGacgcg 343400 344215 F yahL yahLp5 Sigma38 0 343169 343176 AATACCCT 343181 2.78 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taataAATACCCTgtggTttaac 343400 344215 F yahL yahLp12 Sigma38 0 343368 343375 GCGACGTT 343382 3.45 poor homology 0.005516564 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatctGCGACGTTtattttTattta 344890 345561 R yahN yahNp3 Sigma38 0 345664 345671 CCCACATT 345658 3.61 good homology 0.004892754 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acccaCCCACATTattggGttgat 375996 376535 F yaiL yaiLp3 Sigma38 0 375963 375970 GCTAAAAA 375977 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tactcGCTAAAAAttattcAgcggg 379293 380066 R yaiO yaiOp3 Sigma38 0 380234 380241 GATAAATT 380228 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgcGATAAATTaggttGttata 380575 380940 F insC insCp5 Sigma38 0 380482 380489 ACTAGACT 380495 4.21 good homology 0.002265409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taattACTAGACTggcccCctgaa 381963 383159 R yaiP yaiPp2 Sigma38 0 383280 383287 GCTAGGAA 383275 2.52 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaaaGCTAGGAAcgacGcgatt 381963 383159 R yaiP yaiPp4 Sigma38 0 383385 383392 GCTACGAA 383379 3.78 good homology 0.003926527 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctcgGCTACGAAaccccAagtac 383283 383840 R yaiS yaiSp2 Sigma38 0 384035 384042 TATACATA 384030 2.72 poor homology 0.011220644 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataacTATACATAccaaAcatac 383283 383840 R yaiS yaiSp3 Sigma38 0 383937 383944 GCAACATT 383932 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattaGCAACATTtaacAtttat 383283 383840 R yaiS yaiSp4 Sigma38 0 384064 384071 TCTAAATA 384059 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcacaTCTAAATAcaatGtataa 383283 383840 R yaiS yaiSp5 Sigma38 0 383922 383929 TATAAATT 383917 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acattTATAAATTaacaTctggc 383283 383840 R yaiS yaiSp8 Sigma38 0 384060 384067 AATACAAT 384054 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctaAATACAATgtataAaacaa 387977 388951 R hemB hemBp5 Sigma38 0 389124 389131 GCTATAAA 389118 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caacaGCTATAAAtaaagAttaaa 387977 388951 R hemB hemBp6 Sigma38 0 388999 389006 CCTACCCT 388993 4.72 high homology 0.001320163 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acatcCCTACCCTgcttcAggtat 390963 391829 R insF insFp3 Sigma38 0 391848 391855 GCGACATA 391843 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggccGCGACATActtcGcgaag 390963 391829 R insF insFp6 Sigma38 0 391866 391873 GCTATCCT 391860 4.66 high homology 0.00137404 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agctgGCTATCCTccaaaAggccg 393730 394353 F yaiV yaiVp1 Sigma38 0 393571 393578 GCTAACTA 393584 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgatGCTAACTAcctcgGtggtg 393730 394353 F yaiV yaiVp2 Sigma38 0 393677 393684 TCTAAATA 393691 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttaaTCTAAATAatgcccGtcaag 399053 400147 R ddlA ddlAp1 Sigma38 0 400383 400390 TCTTCGTT 400377 2.6 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattcTCTTCGTTaacttAtaatt 399053 400147 R ddlA ddlAp3 Sigma38 0 400154 400161 GATAGGTT 400148 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacggGATAGGTTtttaaGatgga 399053 400147 R ddlA ddlAp4 Sigma38 0 400175 400182 TATGCACT 400170 4.44 high homology 0.001818033 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taatgTATGCACTttgtGttaga 404988 405446 F yaiI yaiIp4 Sigma38 0 404952 404959 GACACAAT 404965 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcgcGACACAATagaggAttacc 404988 405446 F yaiI yaiIp5 Sigma38 0 404950 404957 GCGACACA 404963 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagcGCGACACAatagaGgatta 408332 409243 R rdgC rdgCp2 Sigma38 0 409375 409382 GATACCTA 409369 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaatcGATACCTAtacgcAcggta 408332 409243 R rdgC rdgCp3 Sigma38 0 409291 409298 CCGACAAT 409285 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggccgCCGACAATtcgttAtcatg 408332 409243 R rdgC rdgCp5 Sigma38 0 409269 409276 GCTAAATT 409263 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcccGCTAAATTtaacgAcaagg 409368 410276 F mak makp5 Sigma38 0 409330 409337 TCTACGCT 409342 5.4 high homology 0.000461975 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgtcTCTACGCTattgAtattg 411831 414977 R sbcC sbcCp1 Sigma38 0 414996 415003 CATACCCT 414990 3.1 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttgCATACCCTcgccgGagaac 423561 424142 R acpH acpHp2 Sigma38 0 424214 424221 ACTAAAAT 424208 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcagACTAAAATaagagGcgggt 423561 424142 R acpH acpHp5 Sigma38 0 424150 424157 GATAGAAT 424143 3.63 good homology 0.00484407 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttgGATAGAATataatcGatgaa 429829 430176 F yajD yajDp1 Sigma38 0 429767 429774 GCGAAAAT 429779 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agattGCGAAAATccccGcatct 429829 430176 F yajD yajDp8 Sigma38 0 429803 429810 CCTACATT 429817 5.31 high homology 0.000531398 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaacCCTACATTtcatccAggtaa 431536 432075 R yajI yajIp2 Sigma38 0 432114 432121 TTTACCCT 432108 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgctTTTACCCTctaccAttagg 431536 432075 R yajI yajIp3 Sigma38 0 432183 432190 TTTACCCT 432177 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctatTTTACCCTgaactGacgat 431536 432075 R yajI yajIp7 Sigma38 0 432107 432114 TCTACCAT 432100 4.62 high homology 0.001444488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacccTCTACCATtaggctAattgc 440773 442221 F thiI thiIp2 Sigma38 0 440730 440737 CCTATACA 440742 2.54 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcCCTATACAagtcGcttaa 442275 442865 R yajL yajLp3 Sigma38 0 442975 442982 GCCACACT 442968 5.6 high homology 0.000349153 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctgcGCCACACTgaaatcGactat 446039 446929 R cyoE cyoEp4 Sigma38 0 446999 447006 GCTATCCT 446994 4.66 high homology 0.00137404 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatcGCTATCCTggttGtaggc 451294 452769 R ampG ampGp3 Sigma38 0 452871 452878 GATACCAT 452865 3.82 good homology 0.003735028 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaccGATACCATcgctgAtatgt 463161 463532 F ybaV ybaVp1 Sigma38 0 462972 462979 GCGAAAAT 462984 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagagGCGAAAATcaaaAttggc 463626 464024 F fadM fadMp5 Sigma38 0 463558 463565 GCCAGACT 463571 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCCAGACTgaagaGgtcat 464076 464771 R queC queCp3 Sigma38 0 464802 464809 GTTACCAT 464797 2.63 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggcGTTACCATaacgCtttta 464076 464771 R queC queCp4 Sigma38 0 464957 464964 GCGACGCT 464950 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagatGCGACGCTgacgccGctgtt 468095 469867 F mdlA mdlAp1 Sigma38 0 468069 468076 TCCAGAAT 468083 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaataTCCAGAATcaggtcAggaca 474603 475175 F ybaY ybaYp4 Sigma38 0 474515 474522 GCCACACT 474528 5.6 high homology 0.000349153 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtgtGCCACACTtgttgAcgtta 475206 475595 R ybaZ ybaZp1 Sigma38 0 475761 475768 GCTACATC 475755 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgccaGCTACATCccggcAcacgc 475672 475785 F ffs ffsp2 Sigma38 0 475471 475478 GCGACGAT 475484 3.12 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagcgGCGACGATttgccAgacgc 475896 476249 F ybaA ybaAp2 Sigma38 0 475698 475705 GCTACTCT 475710 4.98 high homology 0.000893825 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaacGCTACTCTgtttAccagg 475896 476249 F ybaA ybaAp3 Sigma38 0 475826 475833 GCTAAACT 475840 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acatgGCTAAACTttaaccAcaact 478591 479142 R maa maap2 Sigma38 0 479238 479245 CATACCCT 479232 3.1 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaagaCATACCCTatgtgAtcttt 479314 479532 R hha hhap5 Sigma38 0 479760 479767 GCGACCTT 479755 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atattGCGACCTTcgcaCttaat 489334 489495 R ybaM ybaMp1 Sigma38 0 489506 489513 GCTAGCAA 489500 2.53 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacccGCTAGCAAtggagAgaata 490106 490483 F ybaN ybaNp5 Sigma38 0 490078 490085 GCCACTCT 490090 3.28 poor homology 0.006805664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtaGCCACTCTgtaaGctgac 490106 490483 F ybaN ybaNp7 Sigma38 0 489864 489871 GCCAGATT 489876 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgcaGCCAGATTatcgCccgcc 502700 503920 R fsr fsrp4 Sigma38 0 504040 504047 TCCAGATT 504035 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgcaTCCAGATTagaaAttctg 504138 505790 F ushA ushAp2 Sigma38 0 503977 503984 ACCAGACT 503990 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttattACCAGACTaacatAcctgt 504138 505790 F ushA ushAp3 Sigma38 0 504037 504044 TCTAATCT 504049 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaattTCTAATCTggatGcagat 504138 505790 F ushA ushAp4 Sigma38 0 504079 504086 TCTATGAT 504092 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttgTCTATGATgtcgcGtcata 505827 506306 R ybaK ybaKp1 Sigma38 0 506507 506514 GCTAAAAA 506502 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttgcGCTAAAAAaatgGccaat 506510 507304 R ybaP ybaPp5 Sigma38 0 507328 507335 GCTAGCAT 507323 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcgcGCTAGCATgataTttcac 513217 513624 F cueR cueRp4 Sigma38 0 512986 512993 TCTACAGT 512999 2.79 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttaTCTACAGTctgtgGtccca 515143 515820 F ybbL ybbLp3 Sigma38 0 514963 514970 GCGACAAA 514976 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccagcGCGACAAAaatgaGaatcg 515143 515820 F ybbL ybbLp4 Sigma38 0 514948 514955 CCGACAAT 514961 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgcgCCGACAATgaccaGcgcga 515143 515820 F ybbL ybbLp5 Sigma38 0 515102 515109 GATAAACT 515116 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaagGATAAACTgtttttAgtaaa 517564 518373 R ybbO ybbOp2 Sigma38 0 518529 518536 CCCAAACT 518523 2.5 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttacCCCAAACTcgccaAagagt 517564 518373 R ybbO ybbOp5 Sigma38 0 518464 518471 GCCACAAT 518459 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcaaGCCACAATggatGcagga 518957 519643 F ybbA ybbAp3 Sigma38 0 518789 518796 GCTGGCAT 518802 3.78 good homology 0.003965989 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCTGGCATtaactAccgac 518957 519643 F ybbA ybbAp4 Sigma38 0 518847 518854 GCCGCGCT 518860 4.12 good homology 0.0026852 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gccagGCCGCGCTggcagAcattc 522485 526765 F rhsD rhsDp5 Sigma38 0 522307 522314 GCTAAAAA 522320 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgtGCTAAAAAtgttaGtttaa 522485 526765 F rhsD rhsDp6 Sigma38 0 522400 522407 AATACATT 522413 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atataAATACATTagctgGtcttg 542485 543270 R ylbA ylbAp1 Sigma38 0 543472 543479 ACTGAATT 543466 3 poor homology 0.008651695 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaaaACTGAATTaccggGtgatg 542485 543270 R ylbA ylbAp3 Sigma38 0 543457 543464 GATGCACA 543451 3.61 good homology 0.00484407 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgggtGATGCACAgtggtGccggg 542485 543270 R ylbA ylbAp4 Sigma38 0 543504 543511 GCCACCCT 543498 4.54 high homology 0.001564796 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggtcGCCACCCTgacagAattgt 545904 547571 F fdrA fdrAp6 Sigma38 0 545849 545856 GCCACATT 545863 5.13 high homology 0.000746586 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taatcGCCACATTaacactGctcgt 550750 551817 R purK purKp2 Sigma38 0 552013 552020 GATAGCCT 552006 3.36 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgtcGATAGCCTctactcCatcgt 555255 555776 R ybcI ybcIp2 Sigma38 0 555801 555808 GATAGCAT 555796 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgctGATAGCATcgacAttttg 555255 555776 R ybcI ybcIp3 Sigma38 0 556002 556009 GCGAAAAT 555997 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcagGCGAAAATcgcgAttgcc 555255 555776 R ybcI ybcIp6 Sigma38 0 555794 555801 TCGACATT 555788 3.69 good homology 0.004427147 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagcaTCGACATTttgccGaagcg 555884 556096 R ybcJ ybcJp1 Sigma38 0 556322 556329 GCCAGGCT 556316 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcaaGCCAGGCTttattCccggt 555884 556096 R ybcJ ybcJp2 Sigma38 0 556197 556204 CATACATT 556190 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcctCATACATTacgcctGttccc 555884 556096 R ybcJ ybcJp6 Sigma38 0 556153 556160 GCCACGCT 556147 4.53 high homology 0.001580522 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggttGCCACGCTgattgAaaaca 557435 557977 F sfmA sfmAp5 Sigma38 0 557241 557248 TCTATATT 557255 4.42 high homology 0.001892229 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggTCTATATTtgtgttGaatat 566065 566364 F insE insEp1 Sigma38 0 565878 565885 GCTAAGTT 565892 4.18 good homology 0.002478752 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaGCTAAGTTcggactGaaagg 568125 569651 F ybcK ybcKp3 Sigma38 0 568104 568111 CATACGTT 568117 2.62 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaagCATACGTTagcagGtgtca 568125 569651 F ybcK ybcKp4 Sigma38 0 567890 567897 ACTAAAAT 567903 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaacgACTAAAATatggaGgctct 571689 572144 F ybcN ybcNp3 Sigma38 0 571605 571612 TCCAAACT 571618 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacaaTCCAAACTctcttCtccct 571689 572144 F ybcN ybcNp4 Sigma38 0 571598 571605 CATACAAT 571610 3.37 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgcaCATACAATccaaActctc 573960 574976 R insH insHp3 Sigma38 0 575054 575061 TCTACTTT 575048 3.68 good homology 0.004561973 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgTCTACTTTcgttgAttaca 577550 577732 F rzoD rzoDp1 Sigma38 0 577439 577446 GCGACAAA 577453 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccagcGCGACAAAaatgccAgagaa 577550 577732 F rzoD rzoDp2 Sigma38 0 577424 577431 CCTACAAA 577437 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcgCCTACAAAgtccaGcgcga 578407 578817 R ybcV ybcVp2 Sigma38 0 578982 578989 TCCAGAAT 578977 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcccTCCAGAATgccaGcagga 586314 587204 R ybcH ybcHp1 Sigma38 0 587272 587279 CATACCTT 587267 2.62 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcaaCATACCTTtaagGcgatt 586314 587204 R ybcH ybcHp3 Sigma38 0 587436 587443 GACAGACT 587430 2.72 poor homology 0.011220644 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taacgGACAGACTattgaGcctta 587205 590177 R nfrA nfrAp2 Sigma38 0 590393 590400 ACCACGCT 590387 2.69 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tactgACCACGCTcggtcAtatta 587205 590177 R nfrA nfrAp3 Sigma38 0 590405 590412 GCCGAAAT 590400 2.81 poor homology 0.010462059 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttcGCCGAAATactgAccacg 587205 590177 R nfrA nfrAp4 Sigma38 0 590235 590242 GATGCAAT 590230 4.48 high homology 0.001799944 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttcGATGCAATcactAttact 602639 603886 R mscM mscMp2 Sigma38 0 604096 604103 GCTACACC 604090 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaagGCTACACCagtctGgtggt 602639 603886 R mscM mscMp5 Sigma38 0 604040 604047 GCTACGCT 604034 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaacGCTACGCTgccgaAatctc 604741 605109 R ybdF ybdFp3 Sigma38 0 605267 605274 TTTACACT 605261 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagcTTTACACTttattGttttg 604741 605109 R ybdF ybdFp6 Sigma38 0 605194 605201 GCGACGCT 605187 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctgGCGACGCTggttctCgctgg 605174 605422 R ybdJ ybdJp1 Sigma38 0 605433 605440 CTTACATT 605427 2.49 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttaaCTTACATTtaacaAtgtta 605488 606606 R ybdK ybdKp2 Sigma38 0 606725 606732 GCCAAATT 606719 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtaGCCAAATTgcttcAggcac 605488 606606 R ybdK ybdKp4 Sigma38 0 606637 606644 TCTATACT 606631 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgactTCTATACTgaataGaaaac 607288 608400 F insL insLp2 Sigma38 0 607116 607123 TTTACGCT 607128 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgggaTTTACGCTtctgGtcgga 607288 608400 F insL insLp4 Sigma38 0 607240 607247 GCTAACTT 607252 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taagcGCTAACTTaaggGttgtg 608682 609311 R entD entDp3 Sigma38 0 609401 609408 CCTACAAA 609394 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccggCCTACAAAaatcttGccaat 631405 631602 F ybdD ybdDp1 Sigma38 0 631328 631335 GATAGCAT 631341 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgttGATAGCATttgtaGgccgg 631612 632700 R ybdH ybdHp2 Sigma38 0 632722 632729 TCTAAATA 632716 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agatgTCTAAATAaaacaAtaagg 631612 632700 R ybdH ybdHp3 Sigma38 0 632753 632760 GCTAGTAT 632747 2.92 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgatGCTAGTATttggcAatcaa 632809 633969 F ybdL ybdLp1 Sigma38 0 632683 632690 GATAGGAT 632696 2.56 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgcgGATAGGATtgtgaGgcatg 635939 636841 R ybdO ybdOp2 Sigma38 0 636954 636961 GCTATTTT 636948 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctgtGCTATTTTagaaaAactta 641311 642549 F ybdR ybdRp3 Sigma38 0 641084 641091 TATACATA 641097 2.72 poor homology 0.011220644 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtctTATACATAaccctTtctcc 641311 642549 F ybdR ybdRp7 Sigma38 0 641264 641271 GCTACCCT 641277 6.24 high homology 0.000103081 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgataGCTACCCTtaaagActgac 642780 643190 R rnk rnkp2 Sigma38 0 643355 643362 TATACATA 643350 2.72 poor homology 0.011220644 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agattTATACATAatgcGctgca 642780 643190 R rnk rnkp5 Sigma38 0 643217 643224 GCGACACT 643212 4.99 high homology 0.000800719 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatctGCGACACTcgcaGcaccg 644340 645803 R citT citTp5 Sigma38 0 645832 645839 GATAAATT 645826 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacttGATAAATTtggaaAtatta 645854 646732 R citG citGp1 Sigma38 0 646863 646870 GCGAAATT 646856 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaagGCGAAATTctctccCgccgc 645854 646732 R citG citGp2 Sigma38 0 646933 646940 GCCACCAT 646928 3.74 good homology 0.004086771 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agctcGCCACCATtgagCttgaa 656778 657161 R crcB crcBp2 Sigma38 0 657197 657204 GTTACACT 657192 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcggcGTTACACTtatcActcat 659648 660601 R ybeF ybeFp3 Sigma38 0 660831 660838 TTTACACT 660825 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccaaTTTACACTgggtcAttact 660860 661501 R lipB lipBp4 Sigma38 0 661541 661548 GATATACT 661535 4.11 good homology 0.002739445 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctgtGATATACTtttccCccact 663325 664413 R rlpA rlpAp2 Sigma38 0 664553 664560 GCGGTATT 664547 2.53 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtaaGCGGTATTctgccGgttgt 663325 664413 R rlpA rlpAp3 Sigma38 0 664500 664507 TCGGCGCT 664495 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaggaTCGGCGCTaattGtgctg 663325 664413 R rlpA rlpAp8 Sigma38 0 664479 664486 GCTGGGTT 664474 4.09 good homology 0.002879899 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgatgGCTGGGTTcgggAttgta 668519 669130 R cobC cobCp2 Sigma38 0 669178 669185 CTTACATT 669172 2.49 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgaCTTACATTaaccaAcaagg 668519 669130 R cobC cobCp4 Sigma38 0 669248 669255 GCGACCAT 669242 3.13 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctcgGCGACCATcatccGcgaac 674793 675770 R ybeQ ybeQp6 Sigma38 0 675882 675889 GCGAGGCT 675876 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcattGCGAGGCTcgtttAtttat 674793 675770 R ybeQ ybeQp7 Sigma38 0 675852 675859 GCGACATA 675847 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgacGCGACATAatacGcataa 675934 676641 F ybeR ybeRp1 Sigma38 0 675896 675903 GCTAATAT 675910 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgcgGCTAATATtcatttAatgaa 675934 676641 F ybeR ybeRp4 Sigma38 0 675736 675743 GATAAATT 675749 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctattGATAAATTatcgcAgcaac 678075 678629 R ybeT ybeTp4 Sigma38 0 678693 678700 ACTACTTT 678686 2.66 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aactgACTACTTTtttattAttgat 678075 678629 R ybeT ybeTp7 Sigma38 0 678670 678677 TATAAACT 678665 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgagTATAAACTtgacGctttc 678075 678629 R ybeT ybeTp9 Sigma38 0 678823 678830 TATACATT 678818 4.38 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccagTATACATTtttgGcgagt 678731 679438 F ybeU ybeUp3 Sigma38 0 678608 678615 TATACATT 678621 4.38 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaataTATACATTaatttTttatt 680946 682616 R hscC hscCp2 Sigma38 0 682703 682710 TTTACGCT 682698 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaatTTTACGCTtaacAcacgt 682700 683635 R rihA rihAp1 Sigma38 0 683763 683770 GCGAAAAT 683757 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctcGCGAAAATcctgcAttaat 682700 683635 R rihA rihAp4 Sigma38 0 683668 683675 GTTACCCT 683663 3.42 poor homology 0.005572007 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctggcGTTACCCTtgtcGcaaag 682700 683635 R rihA rihAp5 Sigma38 0 683755 683762 CCTGCATT 683750 4.9 high homology 0.001007785 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatCCTGCATTaatcActctg 687220 688236 R insH insHp2 Sigma38 0 688292 688299 TTTACATT 688286 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatcTTTACATTtagccAaacta 687220 688236 R insH insHp4 Sigma38 0 688282 688289 GCCAAACT 688277 4.02 good homology 0.003057982 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaGCCAAACTaaatGttacc 688566 690104 R lnt lntp2 Sigma38 0 690240 690247 GCGAAACT 690235 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgtgGCGAAACTatcgAcatcg 688566 690104 R lnt lntp3 Sigma38 0 690294 690301 TCGACACT 690289 4.16 good homology 0.002528826 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaagTCGACACTatcgGtggtc 692754 694178 R miaB miaBp2 Sigma38 0 694222 694229 ATTACACT 694217 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagcATTACACTatgcGccctg 692754 694178 R miaB miaBp3 Sigma38 0 694351 694358 CCGACAAT 694346 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctccgCCGACAATggcaAtttcc 692754 694178 R miaB miaBp6 Sigma38 0 694196 694203 GCTACTAT 694190 4.18 good homology 0.002454088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctgGCTACTATttcgcAagagc 694324 695499 F ubiF ubiFp1 Sigma38 0 694111 694118 GCCATCTT 694124 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatcgGCCATCTTcgatgAatcgt 695653 695727 R glnX glnXp3 Sigma38 0 695955 695962 GCTACGTA 695949 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctgGCTACGTAgctcaGttggt 711261 712025 R ybfF ybfFp3 Sigma38 0 712057 712064 AATACCCT 712051 2.78 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacatAATACCCTaacccGacaac 711261 712025 R ybfF ybfFp5 Sigma38 0 712265 712272 GATATGCT 712260 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgccGATATGCTtagtGtggct 714635 715129 F ybfP ybfPp5 Sigma38 0 714496 714503 GCTACGCT 714509 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgcGCTACGCTtatcaGgccta 716169 717488 R potE potEp3 Sigma38 0 717604 717611 GCCAGGTT 717599 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgctGCCAGGTTttgcAccgga 720279 720956 R kdpE kdpEp1 Sigma38 0 721140 721147 GATAAGTT 721134 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatttGATAAGTTtgctcGcggga 720279 720956 R kdpE kdpEp4 Sigma38 0 721002 721009 GTTACACT 720996 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgtGTTACACTtccccAgcaaa 728357 728563 F ybfA ybfAp4 Sigma38 0 728278 728285 GCGGTACT 728292 3 poor homology 0.008651695 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaagGCGGTACTattttcAtcaga 728357 728563 F ybfA ybfAp5 Sigma38 0 728335 728342 GATACAAA 728348 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggtaGATACAAAaggggGagaaa 728806 732999 F rhsC rhsCp2 Sigma38 0 728577 728584 AATACATT 728589 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttgAATACATTgaaaAccgcc 734873 735442 F ybfC ybfCp2 Sigma38 0 734679 734686 GATACAAA 734691 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggatgGATACAAAgacaGcaagt 734873 735442 F ybfC ybfCp4 Sigma38 0 734835 734842 GCTAAGAT 734848 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttaGCTAAGATgaaacAgagaa 734873 735442 F ybfC ybfCp5 Sigma38 0 734743 734750 GATATACT 734756 4.11 good homology 0.002739445 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accagGATATACTtgtgcAgaacc 740298 741779 R dtpD dtpDp4 Sigma38 0 742018 742025 GCTACACC 742013 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgataGCTACACCgttaAcatag 751452 752018 R ybgD ybgDp8 Sigma38 0 752174 752181 CCTATATT 752167 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accccCCTATATTttattcAtcata 773532 773825 F ybgE ybgEp2 Sigma38 0 773412 773419 GCTAAAAA 773424 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaggaGCTAAAAAtgtgGtattt 773975 774379 F ybgC ybgCp2 Sigma38 0 773874 773881 TTTACGCT 773887 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaattTTTACGCTcccttAacttg 773975 774379 F ybgC ybgCp4 Sigma38 0 773944 773951 TCTAACTT 773957 3.36 poor homology 0.006219909 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagcTCTAACTTttgttGcatta 776963 778255 F tolB tolBp5 Sigma38 0 776921 776928 GCTAAATT 776934 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attctGCTAAATTatcgtGggcca 776963 778255 F tolB tolBp7 Sigma38 0 776747 776754 GCTAAACT 776760 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcaGCTAAACTtgcgaAgatcc 784160 784540 R ybgS ybgSp4 Sigma38 0 784766 784773 TTTACACT 784761 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggggtTTTACACTatgaAcggat 784160 784540 R ybgS ybgSp6 Sigma38 0 784723 784730 GCCAGATT 784717 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaacGCCAGATTgtcgcGaaaaa 784160 784540 R ybgS ybgSp9 Sigma38 0 784694 784701 CCTACAAT 784688 4.99 high homology 0.000858778 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctctCCTACAATttctaActgta 787020 788060 R galM galMp2 Sigma38 0 788225 788232 GCGACAAA 788220 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattgGCGACAAAggtgGcgtac 791539 793011 R modF modFp2 Sigma38 0 793115 793122 CCTACTTT 793108 2.98 poor homology 0.008915179 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacggCCTACTTTaatgccGacagc 791539 793011 R modF modFp3 Sigma38 0 793086 793093 GCCACGCT 793080 4.53 high homology 0.001580522 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcGCCACGCTgtgctAagcgt 793996 794145 F ybhT ybhTp2 Sigma38 0 793910 793917 GCCACGCA 793923 2.87 poor homology 0.010051836 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaacGCCACGCAaagctGaccgc 796836 797654 R ybhA ybhAp2 Sigma38 0 797792 797799 TTTGCATT 797786 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctccTTTGCATTtagcaActgac 796836 797654 R ybhA ybhAp3 Sigma38 0 797820 797827 TATAAACT 797815 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgaTATAAACTgtttGcttca 796836 797654 R ybhA ybhAp8 Sigma38 0 797737 797744 GCTGAATT 797731 4.84 high homology 0.00117088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaatGCTGAATTaaaacGcagaa 796836 797654 R ybhA ybhAp9 Sigma38 0 797766 797773 GCTAAAAT 797760 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taacaGCTAAAATtagtcGctttt 797809 798804 F pgl pglp1 Sigma38 0 797662 797669 TCCAGATT 797676 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtatTCCAGATTaaggttAagaat 798845 799798 R ybhD ybhDp1 Sigma38 0 799829 799836 GCCACCCA 799823 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggccaGCCACCCAaaatcGtcgct 798845 799798 R ybhD ybhDp4 Sigma38 0 799933 799940 GTTACATT 799928 4.01 good homology 0.003119758 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgGTTACATTaaggGcaaag 799982 801034 F ybhH ybhHp2 Sigma38 0 799865 799872 GCCAACTT 799878 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaGCCAACTTaaattAatgaa 799982 801034 F ybhH ybhHp4 Sigma38 0 799819 799826 GCGACGAT 799832 3.12 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggaaGCGACGATtttggGtggct 801110 802543 F ybhI ybhIp4 Sigma38 0 800931 800938 TCGACGTT 800944 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcgcTCGACGTTcatttAagtaa 806656 807132 R ybhB ybhBp1 Sigma38 0 807269 807276 CCTATATT 807263 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gccgcCCTATATTattctCccgca 806656 807132 R ybhB ybhBp4 Sigma38 0 807158 807165 GCTACACT 807153 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttctgGCTACACTttctGcaaac 819107 819811 F ybhL ybhLp2 Sigma38 0 819031 819038 TTTACGCT 819044 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atacgTTTACGCTgcgtcGatgca 819107 819811 F ybhL ybhLp3 Sigma38 0 819025 819032 CATACGTT 819039 2.62 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagtaCATACGTTtacgctGcgtcg 820016 820729 F ybhM ybhMp5 Sigma38 0 819867 819874 ACGACACT 819880 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaaaACGACACTtaacaAgtacc 820765 821721 R ybhN ybhNp3 Sigma38 0 821958 821965 GCGATAAT 821953 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctgcGCGATAATctgaAcggca 820765 821721 R ybhN ybhNp4 Sigma38 0 821770 821777 CCGACAAT 821765 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacaaCCGACAATggaaAcgcag 830095 831459 F rhlE rhlEp5 Sigma38 0 829993 830000 GCTACACT 830006 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaactGCTACACTccgctCcctca 831691 832173 R ybiA ybiAp4 Sigma38 0 832278 832285 CCTGAAAT 832272 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaaaCCTGAAATactgtAtaaac 831691 832173 R ybiA ybiAp5 Sigma38 0 832395 832402 TCCGCAAT 832389 3.57 good homology 0.005092431 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgacgTCCGCAATcatctGccgct 831691 832173 R ybiA ybiAp8 Sigma38 0 832323 832330 GCGGCAAT 832318 3.78 good homology 0.003887457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accagGCGGCAATttgcGcttta 837413 837679 R ybiI ybiIp5 Sigma38 0 837868 837875 GCCATGCT 837862 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcgcGCCATGCTgtttgAactgg 837413 837679 R ybiI ybiIp6 Sigma38 0 837713 837720 GCTACACT 837707 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattaGCTACACTtaactGtacaa 837753 838430 R ybiX ybiXp1 Sigma38 0 838526 838533 GCTACCGT 838521 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagcgGCTACCGTtatcAcccgg 837753 838430 R ybiX ybiXp3 Sigma38 0 838623 838630 GCCAAACT 838617 4.02 good homology 0.003057982 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgatGCCAAACTggggtAtcgag 841019 841279 R mcbA mcbAp6 Sigma38 0 841487 841494 GCTGCGTT 841482 5.35 high homology 0.000490542 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctgGCTGCGTTtatcAttccc 841019 841279 R mcbA mcbAp7 Sigma38 0 841318 841325 CCTACACT 841312 5.78 high homology 0.000205513 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgaCCTACACTtatcaGgcact 841555 842481 F rlmF rlmFp2 Sigma38 0 841501 841508 TTTACCCT 841514 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agataTTTACCCTgtcgcGttatg 841555 842481 F rlmF rlmFp6 Sigma38 0 841384 841391 GATATATT 841397 3.63 good homology 0.004748151 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaacGATATATTtttacAaaata 842478 844703 R ybiO ybiOp3 Sigma38 0 844738 844745 TCTATACT 844732 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcaTCTATACTtatctTtttgc 842478 844703 R ybiO ybiOp4 Sigma38 0 844936 844943 GCTACGCT 844930 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgcGCTACGCTtatcaGgccta 848433 849320 R rhtA rhtAp2 Sigma38 0 849452 849459 ACCAGACT 849447 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taatcACCAGACTaatgAttcca 848433 849320 R rhtA rhtAp3 Sigma38 0 849542 849549 GCTATCCA 849536 3 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaccGCTATCCAtctaaAtttaa 848433 849320 R rhtA rhtAp4 Sigma38 0 849470 849477 TCCAGATT 849463 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attcaTCCAGATTattcctAatcac 848433 849320 R rhtA rhtAp5 Sigma38 0 849336 849343 TCTAGATA 849330 3.08 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaagTCTAGATAtttgtGggaga 848433 849320 R rhtA rhtAp6 Sigma38 0 849348 849355 GCTTTACT 849343 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccacGCTTTACTtaagTctaga 848433 849320 R rhtA rhtAp7 Sigma38 0 849353 849360 TCCACGCT 849346 3.7 good homology 0.004339483 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacacTCCACGCTttacttAagtct 848433 849320 R rhtA rhtAp9 Sigma38 0 849534 849541 TCTAAATT 849527 4.42 high homology 0.001930454 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atccaTCTAAATTtaaatcActttt 850237 851820 R ybiP ybiPp2 Sigma38 0 851829 851836 GTTACGAT 851824 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtttGTTACGATagtgGcatat 850237 851820 R ybiP ybiPp3 Sigma38 0 851943 851950 TCTATCTT 851937 3.36 poor homology 0.00615802 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcgcTCTATCTTcttgcAgccct 851894 852163 F yliL yliLp2 Sigma38 0 851823 851830 GCCACTAT 851835 2.48 poor homology 0.014122302 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catatGCCACTATcgtaAcaaac 851894 852163 F yliL yliLp4 Sigma38 0 851770 851777 GCTAAATA 851782 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacggGCTAAATAcccgGctacg 852175 852263 R rybA rybAp1 Sigma38 0 852288 852295 TATAGCCT 852282 2.53 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tataaTATAGCCTgtgctAtatct 852175 852263 R rybA rybAp2 Sigma38 0 852441 852448 GCGTCACT 852434 2.67 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taactGCGTCACTttttttGctgtt 852175 852263 R rybA rybAp3 Sigma38 0 852283 852290 CCTGTGCT 852276 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatagCCTGTGCTatatctGtatgt 852175 852263 R rybA rybAp4 Sigma38 0 852457 852464 TCCACGTT 852451 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctctTCCACGTTcactaActgcg 852175 852263 R rybA rybAp5 Sigma38 0 852488 852495 TCTGACCT 852482 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcctcTCTGACCTggcggAaccct 852175 852263 R rybA rybAp6 Sigma38 0 852297 852304 GCTATATA 852291 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caataGCTATATAatataGcctgt 852406 852873 F mntR mntRp2 Sigma38 0 852373 852380 GCTATGTA 852387 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaacGCTATGTAtgcgtcAccata 852406 852873 F mntR mntRp3 Sigma38 0 852346 852353 TTTACAAT 852358 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctggTTTACAATgtgcGcacga 852406 852873 F mntR mntRp7 Sigma38 0 852290 852297 GCTATATT 852303 5.25 high homology 0.000593188 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacagGCTATATTatataGctatt 855186 856778 F ybiT ybiTp4 Sigma38 0 854973 854980 GCGAGATT 854985 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttaaGCGAGATTttgtGcctgg 857019 858284 R ybiU ybiUp4 Sigma38 0 858514 858521 GTTACGCT 858509 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcccGTTACGCTaccgAtgata 858436 859251 R ybiV ybiVp2 Sigma38 0 859286 859293 ATTACACT 859280 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgttATTACACTgttacGgtttc 859397 861829 R ybiW ybiWp2 Sigma38 0 861991 861998 GCGAAATT 861985 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttgGCGAAATTcatttTctgcc 859397 861829 R ybiW ybiWp3 Sigma38 0 861845 861852 GCGACCTT 861839 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaccGCGACCTTacgagGataac 862865 863527 F fsaA fsaAp4 Sigma38 0 862782 862789 GTTAGATT 862795 2.75 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaaaGTTAGATTgatgtGcgtca 862865 863527 F fsaA fsaAp7 Sigma38 0 862828 862835 TCTACATT 862841 6 high homology 0.000178665 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatagTCTACATTcagacAaaaag 872202 874550 F yliE yliEp2 Sigma38 0 872024 872031 GTTACGTT 872037 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggataGTTACGTTtgaatAttgct 877471 877854 F bssR bssRp6 Sigma38 0 877316 877323 GATAAAAT 877328 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttctgGATAAAATttgtAtcgca 877471 877854 F bssR bssRp8 Sigma38 0 877424 877431 GCCATACT 877437 4.02 good homology 0.003057982 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaataGCCATACTatttaAttgca 877965 879080 F yliI yliIp5 Sigma38 0 877834 877841 GCCATGCT 877847 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcacGCCATGCTtgagaAggcct 877965 879080 F yliI yliIp6 Sigma38 0 877774 877781 GATAAGCT 877787 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgccGATAAGCTtgaaaAttgtc 877965 879080 F yliI yliIp8 Sigma38 0 877930 877937 ACTACGCT 877942 4.39 good homology 0.002009237 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cactgACTACGCTttaaGccaga 887357 889042 R ybjL ybjLp3 Sigma38 0 889188 889195 GATACCTA 889182 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgttGATACCTAatgtgAttaca 887357 889042 R ybjL ybjLp4 Sigma38 0 889222 889229 GCTAATAT 889216 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccatGCTAATATaggccAacgca 887357 889042 R ybjL ybjLp5 Sigma38 0 889175 889182 ATTACACT 889169 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgtgATTACACTagtaaAatata 889312 889689 F ybjM ybjMp5 Sigma38 0 889219 889226 CCTATATT 889232 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttggCCTATATTagcatGgaatg 889312 889689 F ybjM ybjMp7 Sigma38 0 889262 889269 GCCACACT 889275 5.6 high homology 0.000349153 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaacGCCACACTggcgaAaaatg 897212 897700 F ybjO ybjOp1 Sigma38 0 897042 897049 GCAACATT 897056 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccctgGCAACATTgatcctCggcgc 897212 897700 F ybjO ybjOp2 Sigma38 0 897167 897174 GCCAACCT 897179 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatttGCCAACCTggctAcataa 897212 897700 F ybjO ybjOp3 Sigma38 0 897157 897164 ACTAAAAT 897170 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagacACTAAAATttgccAacctg 897212 897700 F ybjO ybjOp6 Sigma38 0 897176 897183 GCTACATA 897189 5.17 high homology 0.000724521 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acctgGCTACATAatgccGcgcat 900089 900757 R artM artMp1 Sigma38 0 900856 900863 GGTACATT 900850 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacctGGTACATTgtggcGgcggc 904963 905976 R ybjS ybjSp2 Sigma38 0 906097 906104 GCCAGACT 906091 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaatcGCCAGACTggcagAacaaa 914575 915270 R aqpZ aqpZp4 Sigma38 0 915509 915516 GATAAATT 915502 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcatGATAAATTatttttTattac 914575 915270 R aqpZ aqpZp5 Sigma38 0 915462 915469 ACTACACT 915457 5.47 high homology 0.000405658 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtgcACTACACTgtcaAtcaga 915696 917354 F ybjD ybjDp4 Sigma38 0 915649 915656 GTTATACT 915661 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcccGTTATACTgccaGcgtaa 915696 917354 F ybjD ybjDp5 Sigma38 0 915603 915610 GCCATGCT 915616 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catttGCCATGCTtaaatGtgatg 918458 919573 F macA macAp4 Sigma38 0 918295 918302 GCGACATA 918308 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagctGCGACATAttcatGaaatc 918458 919573 F macA macAp6 Sigma38 0 918212 918219 CCGACACT 918224 3.47 poor homology 0.005407329 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccggCCGACACTgtccAcgtgc 918458 919573 F macA macAp7 Sigma38 0 918228 918235 GCCAGACT 918241 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacgtGCCAGACTaagaaAaagtg 922136 922456 F clpS clpSp1 Sigma38 0 921897 921904 TCTAGAAA 921909 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaacTCTAGAAAtacaAtttag 922136 922456 F clpS clpSp3 Sigma38 0 922044 922051 TCTATCAT 922057 3.04 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agttaTCTATCATgtggaGtagat 922136 922456 F clpS clpSp4 Sigma38 0 921903 921910 AATACAAT 921916 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctagaAATACAATttagaGaatta 925951 926655 R aat aatp1 Sigma38 0 926689 926696 GCTATTAT 926683 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtaaGCTATTATtgaacGatccg 925951 926655 R aat aatp2 Sigma38 0 926731 926738 GCCAGACA 926725 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcttGCCAGACAggggcGttatt 926697 928418 R cydC cydCp3 Sigma38 0 928578 928585 GCCAGACA 928572 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgcGCCAGACAacgttAatggt 926697 928418 R cydC cydCp4 Sigma38 0 928639 928646 GCCAGCCT 928634 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgctGCCAGCCTtgatGctcac 926697 928418 R cydC cydCp7 Sigma38 0 928447 928454 GCCACATT 928442 5.13 high homology 0.000746586 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattcGCCACATTactgGcccat 936595 937206 F lolA lolAp3 Sigma38 0 936478 936485 CCGGCACT 936491 3.06 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcatCCGGCACTctatcAactga 936595 937206 F lolA lolAp4 Sigma38 0 936536 936543 CCTGGAAT 936549 3.32 poor homology 0.006604527 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attagCCTGGAATagagaGtagag 946452 947882 F ycaM ycaMp1 Sigma38 0 946316 946323 TCCAAATT 946330 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttatTCCAAATTttattcGtttaa 947883 948791 R ycaN ycaNp3 Sigma38 0 948874 948881 TCCACGTT 948867 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaccTCCACGTTaagttcTggagc 949563 950303 R pflA pflAp1 Sigma38 0 950397 950404 GCTATCTA 950390 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtcaGCTATCTAtactttAaggtg 949563 950303 R pflA pflAp2 Sigma38 0 950478 950485 ACTGAAAT 950472 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttgACTGAAATcgtacAgtaaa 949563 950303 R pflA pflAp5 Sigma38 0 950507 950514 CCTTCACT 950500 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgtaCCTTCACTcaatctAtgtaa 949563 950303 R pflA pflAp6 Sigma38 0 950346 950353 GCTGCGCA 950340 4.16 good homology 0.002528826 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgaGCTGCGCAccaacAcggcc 949563 950303 R pflA pflAp7 Sigma38 0 950393 950400 TCTATACT 950387 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agctaTCTATACTttaagGtgact 955985 956677 F ycaP ycaPp1 Sigma38 0 955945 955952 ACTATGCT 955957 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttgACTATGCTtttaGcggat 959487 960251 F ycaL ycaLp7 Sigma38 0 959445 959452 GATACATA 959459 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgttGATACATAatatttAtatat 963543 965807 F ycaI ycaIp4 Sigma38 0 963393 963400 TCTAATCT 963407 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttcTCTAATCTggaactGgaagc 971845 972624 R ycbC ycbCp3 Sigma38 0 972710 972717 GCTATTTT 972704 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagacGCTATTTTgtcacAgccac 971845 972624 R ycbC ycbCp4 Sigma38 0 972690 972697 GCGAGAAT 972683 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccacgGCGAGAATgaacccGtctgg 992500 993267 R ssuB ssuBp2 Sigma38 0 993370 993377 GCTATTAT 993364 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagtcGCTATTATtctttAcgccc 997091 997630 F elfA elfAp3 Sigma38 0 996961 996968 TATAAATT 996973 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaatcTATAAATTaaagAtttgt 997091 997630 F elfA elfAp5 Sigma38 0 996998 997005 GCTTGATT 997011 3.25 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtatGCTTGATTtaaatGgcgga 997713 998414 F elfD elfDp6 Sigma38 0 997492 997499 GCCAGACA 997505 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcacGCCAGACAcagaaAccggg 997713 998414 F elfD elfDp7 Sigma38 0 997611 997618 TCCATATT 997623 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaattTCCATATTaactAttatt 1005175 1005717 F ycbW ycbWp5 Sigma38 0 1005126 1005133 GCGACAAT 1005139 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgaaGCGACAATggattGtgttg 1005714 1006823 R ycbX ycbXp3 Sigma38 0 1006936 1006943 GCCAAACT 1006930 4.02 good homology 0.003057982 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaggGCCAAACTgacaaAtaaaa 1014119 1014682 F ymbA ymbAp2 Sigma38 0 1014065 1014072 GCTGGTAT 1014078 2.51 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgcGCTGGTATttgaaGcgaag 1014119 1014682 F ymbA ymbAp3 Sigma38 0 1014035 1014042 GCTGAAAA 1014048 2.86 poor homology 0.010254896 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccggtGCTGAAAAcgctcAatgag 1014119 1014682 F ymbA ymbAp4 Sigma38 0 1013877 1013884 GCTAGCCA 1013889 3.32 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctcGCTAGCCAgtcgAtgcag 1023694 1025748 F helD helDp4 Sigma38 0 1023652 1023659 GTTACACT 1023665 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgacgGTTACACTgataaGaaata 1026334 1026996 R yccT yccTp3 Sigma38 0 1027030 1027037 GACACATT 1027025 3.51 good homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attttGACACATTattaTtcggg 1026334 1026996 R yccT yccTp4 Sigma38 0 1027154 1027161 TCCAGACT 1027148 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttccTCCAGACTgtttaAcaaag 1028002 1029192 R rlmI rlmIp2 Sigma38 0 1029286 1029293 TCGACATT 1029281 3.69 good homology 0.004427147 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacttTCGACATTgctgCtctcc 1028002 1029192 R rlmI rlmIp3 Sigma38 0 1029413 1029420 TCCACGCT 1029406 3.7 good homology 0.004339483 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccactTCCACGCTgccatcGtcaag 1029287 1029565 F yccX yccXp3 Sigma38 0 1029041 1029048 GCTAACCA 1029054 3 poor homology 0.008651695 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcgtGCTAACCAttttcCctgat 1029562 1029891 R yccK yccKp2 Sigma38 0 1030066 1030073 ACTATATT 1030059 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacgaACTATATTcgtgccAcggtt 1029562 1029891 R yccK yccKp6 Sigma38 0 1030112 1030119 GCTATCTT 1030106 4.19 good homology 0.002381559 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctggcGCTATCTTgtttgAaacca 1029562 1029891 R yccK yccKp7 Sigma38 0 1029922 1029929 GTTACACT 1029915 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGTTACACTgccgccAgtctg 1045072 1047168 R gfcD gfcDp1 Sigma38 0 1047261 1047268 GCCAGCTT 1047255 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcaGCCAGCTTtggttGggctt 1048662 1048967 R gfcA gfcAp3 Sigma38 0 1049086 1049093 GCTGAACA 1049080 3.65 good homology 0.004654131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagtaGCTGAACAggaggGacagc 1048662 1048967 R gfcA gfcAp4 Sigma38 0 1049026 1049033 CATACACT 1049020 4.16 good homology 0.002554241 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accatCATACACTaaatcAgtaag 1049056 1049331 F insA insAp2 Sigma38 0 1049010 1049017 GCCAACTT 1049022 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgctGCCAACTTactgAtttag 1049056 1049331 F insA insAp5 Sigma38 0 1049007 1049014 GCTGCCAA 1049021 3.37 poor homology 0.005976023 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgatGCTGCCAActtactGattta 1050186 1050398 R cspH cspHp1 Sigma38 0 1050554 1050561 ACTACTTT 1050549 2.66 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtaaACTACTTTgtatGctgtc 1051070 1051300 F ymcE ymcEp2 Sigma38 0 1050885 1050892 GTTACGCT 1050898 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgttGTTACGCTctaagGttgcc 1051512 1052585 R yccM yccMp4 Sigma38 0 1052812 1052819 GCTAAAAA 1052805 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catcaGCTAAAAAgcagttGctcga 1051512 1052585 R yccM yccMp5 Sigma38 0 1052625 1052632 ACTAGAAT 1052620 3.41 poor homology 0.005799405 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaacaACTAGAATagtgGcattt 1052657 1055401 R torS torSp3 Sigma38 0 1055476 1055483 GATAGCCT 1055470 3.36 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcatGATAGCCTcatcaAtaata 1055484 1056512 F torT torTp4 Sigma38 0 1055450 1055457 TCTAGCAT 1055462 3.36 poor homology 0.006219909 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgcaTCTAGCATaaagCcttat 1055484 1056512 F torT torTp6 Sigma38 0 1055247 1055254 GCCATATT 1055259 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgcGCCATATTcatgGtagga 1066087 1066314 R yccJ yccJp1 Sigma38 0 1066345 1066352 GTTAAACT 1066339 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcaGTTAAACTtaacgGctaat 1066087 1066314 R yccJ yccJp3 Sigma38 0 1066332 1066339 GCTAATCT 1066326 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taacgGCTAATCTtcaacAggagg 1066087 1066314 R yccJ yccJp4 Sigma38 0 1066500 1066507 GCTACGCA 1066494 4.57 high homology 0.001533811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattgGCTACGCAgcgcaGgaatt 1067304 1067477 F ymdF ymdFp2 Sigma38 0 1067147 1067154 TCTATTCT 1067160 2.57 poor homology 0.012778388 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgataTCTATTCTcgctaAgaagc 1067304 1067477 F ymdF ymdFp3 Sigma38 0 1067229 1067236 GCGAAAAT 1067242 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgtaGCGAAAATatggcAgccgc 1067304 1067477 F ymdF ymdFp4 Sigma38 0 1067209 1067216 ACTAAGCT 1067223 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agttcACTAAGCTtagtccCacgta 1067304 1067477 F ymdF ymdFp7 Sigma38 0 1067078 1067085 GACACATT 1067090 3.51 good homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatGACACATTtttaTctcat 1067734 1069062 R rutG rutGp1 Sigma38 0 1069182 1069189 ACGACATT 1069175 2.68 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacccACGACATTctgtttTgcgcc 1085329 1085742 R pgaD pgaDp3 Sigma38 0 1085829 1085836 ACGACATT 1085822 2.68 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcaACGACATTggtatcAtttac 1085329 1085742 R pgaD pgaDp7 Sigma38 0 1085982 1085989 GCGACACA 1085977 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgctGCGACACAtactGccgga 1093498 1094364 R insF insFp3 Sigma38 0 1094383 1094390 GCGACATA 1094378 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggccGCGACATActtcGcgaag 1093498 1094364 R insF insFp6 Sigma38 0 1094401 1094408 GCTATCCT 1094395 4.66 high homology 0.00137404 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agctgGCTATCCTccaaaAggccg 1095066 1096052 F ycdU ycdUp4 Sigma38 0 1094877 1094884 ATTACACT 1094891 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctctcATTACACTtaactcAtacgg 1095066 1096052 F ycdU ycdUp10 Sigma38 0 1094917 1094924 GATACATT 1094930 5.21 high homology 0.000696112 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctctcGATACATTtctgaAtatgc 1097109 1098047 F ghrA ghrAp2 Sigma38 0 1096907 1096914 GCTAATTT 1096920 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgggcGCTAATTTagggaAatcat 1097109 1098047 F ghrA ghrAp3 Sigma38 0 1097005 1097012 TCTGCTTT 1097017 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaaaTCTGCTTTttttGccacc 1098102 1098839 F ycdX ycdXp4 Sigma38 0 1098040 1098047 GCTACTAA 1098052 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgcgGCTACTAAtaaaGcatca 1098102 1098839 F ycdX ycdXp7 Sigma38 0 1098066 1098073 GCTATCCT 1098079 4.66 high homology 0.00137404 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcctGCTATCCTtggcgGgaatt 1099519 1100010 F ycdZ ycdZp2 Sigma38 0 1099282 1099289 GTTACCCT 1099295 3.42 poor homology 0.005572007 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatctGTTACCCTggtgtGgtgcg 1099519 1100010 F ycdZ ycdZp3 Sigma38 0 1099504 1099511 GCTATCAT 1099517 3.87 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttctGCTATCATgcgcgGcatga 1100074 1100907 R csgG csgGp2 Sigma38 0 1101139 1101146 GATAACTT 1101133 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttaGATAACTTtactcAggcca 1104637 1104948 F ymdA ymdAp2 Sigma38 0 1104471 1104478 ACTTCATT 1104483 2.66 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagtcACTTCATTtatcAcaaca 1104637 1104948 F ymdA ymdAp3 Sigma38 0 1104573 1104580 GCCAACCT 1104585 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcaGCCAACCTgaaaGtatgg 1104637 1104948 F ymdA ymdAp4 Sigma38 0 1104562 1104569 GCTGCGAA 1104576 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtctGCTGCGAAtcagccAacctg 1104637 1104948 F ymdA ymdAp6 Sigma38 0 1104492 1104499 GCCGCCCT 1104505 4.13 good homology 0.002658482 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caatgGCCGCCCTcttcaGaaaag 1107007 1108164 R opgC opgCp3 Sigma38 0 1108279 1108286 GCTATGCA 1108273 2.99 poor homology 0.008738646 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgatGCTATGCAtaaaaAccttg 1112802 1113029 F yceK yceKp4 Sigma38 0 1112649 1112656 GCTACGCT 1112662 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgcGCTACGCTtatcaGgccta 1117124 1117699 R yceI yceIp2 Sigma38 0 1117748 1117755 ACGACACT 1117742 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaagACGACACTctgaaGcgcat 1117124 1117699 R yceI yceIp3 Sigma38 0 1117878 1117885 GCGACCCT 1117872 3.93 good homology 0.003379593 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccccGCGACCCTtgccgAcgctg 1118530 1118670 R yceO yceOp5 Sigma38 0 1118829 1118836 GCCACGAT 1118823 3.74 good homology 0.004127844 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acccgGCCACGATaatacActgct 1118530 1118670 R yceO yceOp6 Sigma38 0 1118821 1118828 AATACACT 1118816 3.84 good homology 0.003661069 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgatAATACACTgctcAttacc 1118530 1118670 R yceO yceOp9 Sigma38 0 1118842 1118849 GATACCCT 1118836 4.62 high homology 0.001430116 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcGATACCCTacccgGccacg 1121936 1122496 R yceB yceBp1 Sigma38 0 1122678 1122685 GCGATAAT 1122672 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaccGCGATAATatggcGaaaca 1123341 1124549 R mdtH mdtHp4 Sigma38 0 1124747 1124754 AATACGCT 1124742 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctttAATACGCTgtaaGtatta 1123341 1124549 R mdtH mdtHp6 Sigma38 0 1124643 1124650 GCGACGTT 1124637 3.45 poor homology 0.005516564 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaaaGCGACGTTttgatAaaaaa 1125380 1126027 F yceH yceHp3 Sigma38 0 1125345 1125352 CCCAGACT 1125357 2.82 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actacCCCAGACTggacGcccgg 1126029 1126952 F yceM yceMp2 Sigma38 0 1125864 1125871 GCTACATG 1125877 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaccGCTACATGcatctTttcag 1126029 1126952 F yceM yceMp3 Sigma38 0 1125782 1125789 TCGACGCT 1125795 3.09 poor homology 0.008066787 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggagTCGACGCTggaacAactgg 1143725 1144045 F yceQ yceQp1 Sigma38 0 1143609 1143616 CTTACATT 1143621 2.49 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttattCTTACATTgacgActaag 1143725 1144045 F yceQ yceQp2 Sigma38 0 1143621 1143628 ACTAAGCT 1143633 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgacgACTAAGCTgcggGcaaag 1143725 1144045 F yceQ yceQp3 Sigma38 0 1143686 1143693 GCCAACCT 1143698 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgtcGCCAACCTcacgGttatc 1145234 1145818 R yceF yceFp3 Sigma38 0 1145838 1145845 AATACGCT 1145831 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatcAATACGCTatatctGatgga 1145234 1145818 R yceF yceFp5 Sigma38 0 1145847 1145854 GCTATCAT 1145842 3.87 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaatgGCTATCATcaatAcgcta 1152523 1153332 F pabC pabCp4 Sigma38 0 1152399 1152406 TCTAAGTT 1152411 3.35 poor homology 0.00634556 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagaTCTAAGTTgtcaTtttcc 1152523 1153332 F pabC pabCp6 Sigma38 0 1152414 1152421 TCCACCCT 1152427 3.71 good homology 0.004296305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catttTCCACCCTtataaAaggtc 1152523 1153332 F pabC pabCp7 Sigma38 0 1152336 1152343 AATACACT 1152348 3.84 good homology 0.003661069 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatggAATACACTctgtGtaact 1152523 1153332 F pabC pabCp9 Sigma38 0 1152490 1152497 GCCACACT 1152502 5.6 high homology 0.000349153 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgctGCCACACTaacaAttctc 1161108 1161467 F hinT hinTp4 Sigma38 0 1161041 1161048 TCTATACT 1161053 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catacTCTATACTcgcaGtgtgg 1168296 1168553 F bhsA bhsAp2 Sigma38 0 1168156 1168163 ACTGAAAT 1168169 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaACTGAAATttaaaGatttt 1168296 1168553 F bhsA bhsAp5 Sigma38 0 1168228 1168235 TCTATCAT 1168242 3.04 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcacaTCTATCATttagttAtcgat 1168296 1168553 F bhsA bhsAp7 Sigma38 0 1168277 1168284 TCTGCATA 1168290 3.93 good homology 0.003345965 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attcaTCTGCATAaggccActatt 1173315 1174388 R ycfT ycfTp6 Sigma38 0 1174454 1174461 GATACCCA 1174449 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agacaGATACCCAttacAcctcg 1173315 1174388 R ycfT ycfTp7 Sigma38 0 1174555 1174562 GCTAATCT 1174549 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggGCTAATCTgaaaaGccccc 1173315 1174388 R ycfT ycfTp10 Sigma38 0 1174524 1174531 GCTAAATT 1174518 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcgGCTAAATTgccatGtttta 1174650 1175849 F lolC lolCp4 Sigma38 0 1174610 1174617 TATATACT 1174622 3.27 poor homology 0.006874063 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgctTATATACTcgtgTctttg 1177816 1178727 F nagK nagKp2 Sigma38 0 1177684 1177691 TCTACGTA 1177698 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtctTCTACGTActggtcAcagca 1179702 1180490 R ycfZ ycfZp4 Sigma38 0 1180714 1180721 GCTAATTT 1180709 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacacGCTAATTTtcaaTtcgag 1179702 1180490 R ycfZ ycfZp8 Sigma38 0 1180726 1180733 GCCAGATT 1180721 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgacGCCAGATTacacGctaat 1181006 1182052 R potD potDp3 Sigma38 0 1182260 1182267 TTTACCCT 1182255 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taagcTTTACCCTgtcgAtggac 1181006 1182052 R potD potDp4 Sigma38 0 1182094 1182101 GCCAGCTT 1182089 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgccaGCCAGCTTattgCtcgtg 1186342 1187463 R ycfD ycfDp1 Sigma38 0 1187560 1187567 GCCAGCAT 1187554 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggtcGCCAGCATtctgcGccgaa 1186342 1187463 R ycfD ycfDp2 Sigma38 0 1187526 1187533 CCCATACT 1187521 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgCCCATACTtcacGcatta 1186342 1187463 R ycfD ycfDp3 Sigma38 0 1187687 1187694 GATACTTT 1187680 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggttGATACTTTacgcccTgggca 1187539 1188999 R phoQ phoQp2 Sigma38 0 1189181 1189188 GATACGCA 1189175 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgttGATACGCAataatGgcaaa 1187539 1188999 R phoQ phoQp4 Sigma38 0 1189203 1189210 AATACACT 1189197 3.84 good homology 0.003661069 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttcgAATACACTattatGgaaac 1189839 1191209 R purB purBp1 Sigma38 0 1191442 1191449 GCTATCTA 1191436 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctGCTATCTAtgttgAtgtga 1189839 1191209 R purB purBp3 Sigma38 0 1191438 1191445 TCTATGTT 1191432 3.35 poor homology 0.00628242 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctaTCTATGTTgatgtGattag 1193050 1193511 R nudJ nudJp3 Sigma38 0 1193600 1193607 CCCACGCT 1193593 3.01 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcttcCCCACGCTgcgactGattcg 1196090 1196755 R ymfD ymfDp3 Sigma38 0 1196790 1196797 GATAAAAT 1196784 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggacGATAAAATaaaagAatttt 1197918 1198811 F lit litp6 Sigma38 0 1197806 1197813 TCTAAACA 1197819 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatatTCTAAACAtgtcgAtaatt 1197918 1198811 F lit litp7 Sigma38 0 1197878 1197885 TATATACT 1197891 3.27 poor homology 0.006874063 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttgTATATACTacctaGcccaa 1198902 1200029 R intE intEp5 Sigma38 0 1200164 1200171 GCTAAGCA 1200157 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttatGCTAAGCAgaatttAttttg 1198902 1200029 R intE intEp8 Sigma38 0 1200182 1200189 TCCACATT 1200176 4.3 good homology 0.002154924 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgtgTCCACATTgcgtcGttatg 1200999 1201307 R ymfJ ymfJp4 Sigma38 0 1201494 1201501 GATACAAA 1201488 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagaaGATACAAAatcaaAgccta 1200999 1201307 R ymfJ ymfJp5 Sigma38 0 1201417 1201424 GATACATA 1201412 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgaGATACATAatgtAcccaa 1200999 1201307 R ymfJ ymfJp7 Sigma38 0 1201534 1201541 TCTATAAT 1201529 4.1 good homology 0.002822873 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgcTCTATAATtggtActgtg 1201482 1202156 R cohE cohEp4 Sigma38 0 1202302 1202309 GCCAACTT 1202296 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttgaGCCAACTTttccgGccaac 1201482 1202156 R cohE cohEp5 Sigma38 0 1202252 1202259 AATACGCT 1202246 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcccAATACGCTttcatAcaata 1201482 1202156 R cohE cohEp7 Sigma38 0 1202242 1202249 CATACAAT 1202237 3.37 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctttCATACAATatgtAcctcc 1202247 1202447 F croE croEp2 Sigma38 0 1201999 1202006 GCCATGCT 1202013 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcgtGCCATGCTgtcaccGatatt 1207740 1208342 R tfaE tfaEp4 Sigma38 0 1208559 1208566 TCCACGAT 1208554 2.9 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caagaTCCACGATtgtgActgat 1208908 1209462 F pinE pinEp2 Sigma38 0 1208764 1208771 GCCAGCCT 1208776 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttcaGCCAGCCTgttgGcggag 1209569 1210402 F mcrA mcrAp3 Sigma38 0 1209328 1209335 CCCAAACT 1209342 2.5 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcgtCCCAAACTtacaccAgaaca 1209569 1210402 F mcrA mcrAp4 Sigma38 0 1209407 1209414 TCTATGAT 1209419 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattaTCTATGATgttgGtgtgt 1209569 1210402 F mcrA mcrAp5 Sigma38 0 1209510 1209517 GTTGCAAT 1209524 3.28 poor homology 0.006805664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacttGTTGCAATtttatcAataaa 1211926 1212330 R ycgX ycgXp2 Sigma38 0 1212362 1212369 ACTACGCA 1212356 2.73 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcacACTACGCAgtctcAcaact 1213487 1214698 R ycgF ycgFp4 Sigma38 0 1214842 1214849 TCTATACA 1214836 3.24 poor homology 0.007154598 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacaaTCTATACAagattTttcgc 1213487 1214698 R ycgF ycgFp5 Sigma38 0 1214925 1214932 GATAAATT 1214919 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaatGATAAATTaatttTttgca 1216551 1218074 F ycgG ycgGp2 Sigma38 0 1216372 1216379 CCTAACTT 1216385 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcccgCCTAACTTattttGtactg 1216551 1218074 F ycgG ycgGp5 Sigma38 0 1216470 1216477 TCTACCAT 1216484 4.62 high homology 0.001444488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctcTCTACCATgctctcTgtaga 1216551 1218074 F ycgG ycgGp6 Sigma38 0 1216391 1216398 CCTACATT 1216405 5.31 high homology 0.000531398 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tactgCCTACATTatgctcAataat 1218206 1218424 F ymgF ymgFp12 Sigma38 0 1218163 1218170 GCTATAAT 1218176 4.93 high homology 0.00096827 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtttGCTATAATtgtttGaaagt 1223502 1223768 R minE minEp1 Sigma38 0 1223865 1223872 CCTACGCA 1223858 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaagCCTACGCAgataccGtagaa 1223502 1223768 R minE minEp2 Sigma38 0 1223892 1223899 TCGACATT 1223885 3.69 good homology 0.004427147 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattcTCGACATTaacgccGatgcg 1225823 1226191 F ycgJ ycgJp2 Sigma38 0 1225689 1225696 TCTATCAT 1225701 3.04 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgcTCTATCATagaaAccgca 1225823 1226191 F ycgJ ycgJp4 Sigma38 0 1225607 1225614 GCCAGGCT 1225620 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accacGCCAGGCTttcttAacttt 1226294 1226695 R pliG pliGp3 Sigma38 0 1226911 1226918 GCCAGGTT 1226905 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagatGCCAGGTTttggcAtaagc 1226294 1226695 R pliG pliGp8 Sigma38 0 1226894 1226901 GCTAACAT 1226888 3.86 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cataaGCTAACATcaatgAaaccc 1227302 1227961 F ycgM ycgMp2 Sigma38 0 1227277 1227284 TCCACGAT 1227290 2.9 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcataTCCACGATaaggtGagggg 1227302 1227961 F ycgM ycgMp4 Sigma38 0 1227214 1227221 ACGACACT 1227227 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacagACGACACTaacaaAtaacc 1228038 1228499 F ycgN ycgNp2 Sigma38 0 1227839 1227846 TTTACCCT 1227851 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtttTTTACCCTcaagGccggt 1228038 1228499 F ycgN ycgNp4 Sigma38 0 1228006 1228013 GCCAGACT 1228018 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctgtGCCAGACTggttAtaagg 1231723 1232253 R dsbB dsbBp3 Sigma38 0 1232451 1232458 TTTACGCT 1232444 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgagTTTACGCTtgccccTgtaac 1232399 1233940 R nhaB nhaBp3 Sigma38 0 1234101 1234108 GCTAACTA 1234095 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaggGCTAACTAcgctgAtagca 1232399 1233940 R nhaB nhaBp6 Sigma38 0 1234097 1234104 ACTACGCT 1234092 4.39 good homology 0.002009237 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggctaACTACGCTgataGcagac 1239558 1241294 R cvrA cvrAp2 Sigma38 0 1241364 1241371 GCTAAGTA 1241359 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggGCTAAGTAaaacGctgtc 1239558 1241294 R cvrA cvrAp3 Sigma38 0 1241340 1241347 GCTAATAT 1241334 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgccGCTAATATggtagGgttta 1239558 1241294 R cvrA cvrAp5 Sigma38 0 1241474 1241481 GTTACGCT 1241467 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcacgGTTACGCTgccgttGggcgc 1241389 1242303 R ldcA ldcAp2 Sigma38 0 1242383 1242390 TATAGCCT 1242376 2.53 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcctTATAGCCTggaatcGccgtt 1241389 1242303 R ldcA ldcAp3 Sigma38 0 1242541 1242548 GCTGCACC 1242535 2.82 poor homology 0.010462059 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccagGCTGCACCggcttTctggc 1241389 1242303 R ldcA ldcAp5 Sigma38 0 1242528 1242535 TCTGGCTT 1242523 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcttTCTGGCTTattgGcatcc 1241389 1242303 R ldcA ldcAp6 Sigma38 0 1242378 1242385 CCTGGAAT 1242373 3.32 poor homology 0.006604527 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatagCCTGGAATcgccGttgag 1241389 1242303 R ldcA ldcAp7 Sigma38 0 1242391 1242398 TCTATCCT 1242386 3.83 good homology 0.003697864 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttctTCTATCCTtataGcctgg 1241389 1242303 R ldcA ldcAp8 Sigma38 0 1242332 1242339 TATACATT 1242326 4.38 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catgaTATACATTtcgttTctgtt 1242403 1243014 F emtA emtAp2 Sigma38 0 1242194 1242201 TCGACGTT 1242206 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaccTCGACGTTattgActtga 1242403 1243014 F emtA emtAp3 Sigma38 0 1242231 1242238 GCTGGATA 1242243 3.5 poor homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaggcGCTGGATAccacGcagcg 1243951 1244205 F ymgE ymgEp5 Sigma38 0 1243887 1243894 CCTATACT 1243899 4.2 good homology 0.002311173 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccttgCCTATACTtagaGcgttg 1244383 1244823 F ycgY ycgYp4 Sigma38 0 1244161 1244168 GCTATTCT 1244175 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgggaGCTATTCTcgttctGggcat 1252308 1255175 R ycgV ycgVp5 Sigma38 0 1255341 1255348 TATATATT 1255334 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaTATATATTaattccTgtgtt 1252308 1255175 R ycgV ycgVp7 Sigma38 0 1255373 1255380 TATAAACT 1255366 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcgaTATAAACTcaccttTgtaag 1268391 1268498 R ldrA ldrAp1 Sigma38 0 1268526 1268533 GCCGCAAA 1268520 2.73 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaataGCCGCAAAatgttGtcatt 1268391 1268498 R ldrA ldrAp3 Sigma38 0 1268613 1268620 GCTGGAAA 1268607 3.18 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggttGCTGGAAAgagaaAacccc 1268391 1268498 R ldrA ldrAp4 Sigma38 0 1268701 1268708 GATGAATT 1268695 3.22 poor homology 0.007372488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgaaGATGAATTgagtcGtagta 1268391 1268498 R ldrA ldrAp5 Sigma38 0 1268557 1268564 GCTAATCT 1268550 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggggGCTAATCTtgaaccAgaaca 1268391 1268498 R ldrA ldrAp6 Sigma38 0 1268741 1268748 AATGCACT 1268736 3.43 poor homology 0.005572007 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accggAATGCACTcttcAttgca 1268391 1268498 R ldrA ldrAp7 Sigma38 0 1268734 1268741 TCTTCATT 1268729 3.68 good homology 0.004561973 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcacTCTTCATTgcaaAcattt 1268546 1268612 F rdlA rdlAp2 Sigma38 0 1268305 1268312 GATACAAA 1268317 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgccgGATACAAAaaagGccgca 1268546 1268612 F rdlA rdlAp3 Sigma38 0 1268532 1268539 GCTATTCT 1268546 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgcgGCTATTCTtgaattGttctg 1268546 1268612 F rdlA rdlAp4 Sigma38 0 1268502 1268509 GCCGCCTT 1268515 3.65 good homology 0.004654131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atataGCCGCCTTgttgtAatgac 1268926 1269033 R ldrB ldrBp4 Sigma38 0 1269092 1269099 GCTAATCT 1269087 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggggGCTAATCTtgaaAccaga 1269081 1269146 F rdlB rdlBp1 Sigma38 0 1268948 1268955 CCGACAAT 1268960 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accagCCGACAATcgctGcggta 1269081 1269146 F rdlB rdlBp3 Sigma38 0 1269067 1269074 GCTATTCT 1269079 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgcgGCTATTCTtgaaGtgtct 1269461 1269568 R ldrC ldrCp3 Sigma38 0 1269627 1269634 GCTAATCT 1269622 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggggGCTAATCTtgaaAccaga 1269616 1269683 F rdlC rdlCp2 Sigma38 0 1269602 1269609 GCTATTCT 1269614 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgcgGCTATTCTtgaaGtgtct 1269972 1271072 R chaA chaAp2 Sigma38 0 1271117 1271124 CCTACCTA 1271110 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttCCTACCTAttttttAcattt 1269972 1271072 R chaA chaAp5 Sigma38 0 1271106 1271113 TTTACATT 1271101 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatttTTTACATTttcgAtaaat 1269972 1271072 R chaA chaAp6 Sigma38 0 1271095 1271102 GATAAATT 1271089 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcGATAAATTcatctGcaaag 1269972 1271072 R chaA chaAp8 Sigma38 0 1271288 1271295 TCTACTCT 1271282 4.15 good homology 0.002605841 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caataTCTACTCTtgccaAaacat 1271342 1271572 F chaB chaBp4 Sigma38 0 1271304 1271311 ACCACACT 1271316 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttgACCACACTtaatGttcaa 1287005 1287847 R purU purUp1 Sigma38 0 1288086 1288093 CCGACAAT 1288080 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggacgCCGACAATatcggAtttgt 1287005 1287847 R purU purUp2 Sigma38 0 1287981 1287988 ACTATATT 1287976 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atggtACTATATTgacgGtacac 1292750 1293367 F tdk tdkp5 Sigma38 0 1292713 1292720 GCCAACTT 1292727 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctccaGCCAACTTtatttcAtatca 1292750 1293367 F tdk tdkp7 Sigma38 0 1292702 1292709 GATAAACT 1292716 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attatGATAAACTccagccAacttt 1297821 1298468 F ychE ychEp6 Sigma38 0 1297786 1297793 GCTAACAT 1297799 3.86 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatgGCTAACATtatccGgcttt 1297821 1298468 F ychE ychEp8 Sigma38 0 1297662 1297669 GCTACATT 1297675 6.83 high homology 4.19E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggtgGCTACATTagcatGttttg 1304845 1305174 R yciU yciUp7 Sigma38 0 1305379 1305386 GCTAAATT 1305373 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgtgGCTAAATTtcgagAttacc 1309872 1310270 R yciA yciAp3 Sigma38 0 1310429 1310436 TCTTCACA 1310423 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttaaTCTTCACAttgttAagcgg 1309872 1310270 R yciA yciAp5 Sigma38 0 1310368 1310375 ACCAGACT 1310363 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctaACCAGACTgccaGtcctt 1309872 1310270 R yciA yciAp6 Sigma38 0 1310485 1310492 GCCGCAAA 1310478 2.73 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctGCCGCAAAatatttGggtca 1310375 1310914 R yciB yciBp4 Sigma38 0 1310987 1310994 GCCATATT 1310982 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttcaGCCATATTgctcAtctat 1312742 1313248 R yciE yciEp4 Sigma38 0 1313427 1313434 GCGACGCT 1313421 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattaGCGACGCTggctgAacaat 1314440 1315246 R trpA trpAp1 Sigma38 0 1315474 1315481 GACGCGCT 1315469 2.5 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cactgGACGCGCTgattAcgtgt 1314440 1315246 R trpA trpAp3 Sigma38 0 1315297 1315304 GCGGCGAT 1315292 2.71 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggtcGCGGCGATaaagAcatct 1314440 1315246 R trpA trpAp6 Sigma38 0 1315389 1315396 GCTGGAAT 1315382 4.84 high homology 0.001182647 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccggcGCTGGAATcctcccAcgccc 1328441 1328692 R yciN yciNp2 Sigma38 0 1328834 1328841 GTCACACT 1328827 2.78 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagcGTCACACTgtacctGataaa 1328441 1328692 R yciN yciNp4 Sigma38 0 1328810 1328817 GATACGCA 1328804 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatccGATACGCAactttAttagc 1328441 1328692 R yciN yciNp6 Sigma38 0 1328820 1328827 GATAAAAT 1328814 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacctGATAAAATccgatAcgcaa 1328441 1328692 R yciN yciNp7 Sigma38 0 1328851 1328858 GCCAGATT 1328845 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctattGCCAGATTgacgaAagcgt 1333184 1333312 F ymiA ymiAp3 Sigma38 0 1333049 1333056 TATTCACT 1333061 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaatTATTCACTggagAcgatt 1333184 1333312 F ymiA ymiAp8 Sigma38 0 1333076 1333083 GCTGGATT 1333088 5.16 high homology 0.000731802 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattcGCTGGATTtttgActaaa 1341621 1342370 R yciT yciTp2 Sigma38 0 1342486 1342493 GCCAGACA 1342480 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctacGCCAGACAtcccgAaggca 1341621 1342370 R yciT yciTp3 Sigma38 0 1342505 1342512 GCCAGGTT 1342499 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttgcGCCAGGTTgctgaAtctac 1341621 1342370 R yciT yciTp4 Sigma38 0 1342575 1342582 GATATCCT 1342570 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttaGATATCCTtgtgGcaggc 1347004 1348131 R yciW yciWp2 Sigma38 0 1348323 1348330 TCCACGTT 1348318 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtggTCCACGTTgacgGcggtt 1347004 1348131 R yciW yciWp3 Sigma38 0 1348218 1348225 TATACCTT 1348213 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgtTATACCTTtctgAtattt 1349431 1349784 R ycjD ycjDp1 Sigma38 0 1349849 1349856 GCTAATTT 1349843 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agatcGCTAATTTtctgaAtcctc 1349431 1349784 R ycjD ycjDp3 Sigma38 0 1349828 1349835 TCCAGATT 1349823 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcctTCCAGATTattcAcctca 1349852 1350658 R sapF sapFp2 Sigma38 0 1350860 1350867 ACCAGACT 1350854 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgatACCAGACTtcggcAgcgcg 1349852 1350658 R sapF sapFp3 Sigma38 0 1350820 1350827 AATACGCT 1350814 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcctcAATACGCTgcccgGcgcta 1349852 1350658 R sapF sapFp6 Sigma38 0 1350722 1350729 GCCACGTT 1350716 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgacGCCACGTTtgacgGgggcg 1349852 1350658 R sapF sapFp7 Sigma38 0 1350761 1350768 GCCACGTT 1350756 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgggGCCACGTTgcccGtatgc 1355447 1355692 R ymjA ymjAp2 Sigma38 0 1355725 1355732 TCCGCCCT 1355720 3.3 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcaTCCGCCCTtatgCttagc 1355447 1355692 R ymjA ymjAp3 Sigma38 0 1355914 1355921 GCTTCGTT 1355908 3.43 poor homology 0.005572007 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatggGCTTCGTTaggcgGcgcat 1355447 1355692 R ymjA ymjAp4 Sigma38 0 1355732 1355739 GCTATCAT 1355726 3.87 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgagtGCTATCATccgccCttatg 1360767 1362254 F puuC puuCp1 Sigma38 0 1360538 1360545 TATACACA 1360551 3.19 poor homology 0.007446583 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caatcTATACACAaaatcAttcaa 1360767 1362254 F puuC puuCp2 Sigma38 0 1360536 1360543 TCTATACA 1360548 3.24 poor homology 0.007154598 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcaaTCTATACAcaaaAtcatt 1368240 1369919 F ycjM ycjMp2 Sigma38 0 1368117 1368124 AATACGCT 1368130 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcacaAATACGCTttttcCctggt 1379971 1380876 F ompG ompGp3 Sigma38 0 1379742 1379749 GCCAAAAT 1379754 3.23 poor homology 0.007372488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttccGCCAAAATtagcGtggca 1379971 1380876 F ompG ompGp4 Sigma38 0 1379922 1379929 GCTAAATA 1379935 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattcGCTAAATAcagggGgaagg 1388957 1389877 R ycjY ycjYp4 Sigma38 0 1390099 1390106 GCCATGCT 1390093 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgcGCCATGCTcaggcGggctg 1388957 1389877 R ycjY ycjYp7 Sigma38 0 1390067 1390074 GCTACGCT 1390061 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgaaGCTACGCTcctctGcaacg 1391251 1392864 F mppA mppAp2 Sigma38 0 1391185 1391192 TTTGCATT 1391198 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agttgTTTGCATTtctttAaggcg 1391251 1392864 F mppA mppAp3 Sigma38 0 1391087 1391094 ACCGCATT 1391100 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctttACCGCATTttggaGactat 1391251 1392864 F mppA mppAp8 Sigma38 0 1391154 1391161 GCTTCCTT 1391166 3.44 poor homology 0.005516564 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgatGCTTCCTTtgtcActttt 1391251 1392864 F mppA mppAp10 Sigma38 0 1391127 1391134 GATATATT 1391139 3.63 good homology 0.004748151 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatttGATATATTgataCttaaa 1391251 1392864 F mppA mppAp11 Sigma38 0 1391108 1391115 TTTACACT 1391122 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattaTTTACACTaaatctGatttg 1394100 1395116 F insH insHp3 Sigma38 0 1394054 1394061 GCAACATT 1394067 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtaGCAACATTagctaAggaag 1394100 1395116 F insH insHp4 Sigma38 0 1394001 1394008 GCTATTTT 1394014 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgggGCTATTTTaccgcGacaat 1394100 1395116 F insH insHp6 Sigma38 0 1394012 1394019 GCGACAAT 1394026 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaccGCGACAATtcattcAgatca 1395389 1395646 F ynaJ ynaJp3 Sigma38 0 1395153 1395160 TCTAAATA 1395166 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacggTCTAAATAggctgAttcaa 1395389 1395646 F ynaJ ynaJp4 Sigma38 0 1395344 1395351 GTTACGTT 1395357 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtattGTTACGTTtaggtAacaag 1402765 1403673 F abgR abgRp1 Sigma38 0 1402541 1402548 GCGATAAT 1402554 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccagtGCGATAATtttggGgcaag 1402765 1403673 F abgR abgRp3 Sigma38 0 1402695 1402702 GACACAAT 1402708 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accctGACACAATcatctGcatta 1403676 1403833 R isrA isrAp6 Sigma38 0 1403985 1403992 CCCGCAAT 1403979 2.87 poor homology 0.010051836 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcctCCCGCAATtaagaGcgcga 1403676 1403833 R isrA isrAp8 Sigma38 0 1404047 1404054 GCTGGACA 1404040 3.98 good homology 0.003279711 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcgGCTGGACAtcttccAtggcg 1404003 1404566 F ydaL ydaLp5 Sigma38 0 1403845 1403852 GTTACATT 1403857 4.01 good homology 0.003119758 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tataaGTTACATTattaAtatcg 1407535 1408908 F dbpA dbpAp3 Sigma38 0 1407335 1407342 ACGACACT 1407348 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgACGACACTtatttAtttgc 1407535 1408908 F dbpA dbpAp4 Sigma38 0 1407501 1407508 GCTAACTT 1407515 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcctGCTAACTTtgcgtcGatgac 1407535 1408908 F dbpA dbpAp5 Sigma38 0 1407293 1407300 TCTACCCT 1407306 5.41 high homology 0.000448321 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcgTCTACCCTttaagAgtcca 1409037 1409972 R ttcA ttcAp1 Sigma38 0 1410214 1410221 GCTGGTAT 1410208 2.51 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgtGCTGGTATtcgccGccgta 1409037 1409972 R ttcA ttcAp2 Sigma38 0 1410139 1410146 CCGGCATT 1410134 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaacCCGGCATTtataGccagc 1409037 1409972 R ttcA ttcAp3 Sigma38 0 1410201 1410208 GCCGTAAT 1410196 2.82 poor homology 0.010462059 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgccGCCGTAATccgtAccata 1410024 1411259 R intR intRp1 Sigma38 0 1411323 1411330 GCCAGACA 1411318 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtaaGCCAGACAgcaaAcgagg 1410024 1411259 R intR intRp2 Sigma38 0 1411400 1411407 GCCAGACA 1411394 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggggGCCAGACAaattgAagcat 1410024 1411259 R intR intRp3 Sigma38 0 1411500 1411507 TCTAACAT 1411495 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcagTCTAACATtggcGcctgc 1415512 1415787 R racC racCp2 Sigma38 0 1415842 1415849 TCGAAACT 1415835 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actatTCGAAACTgaatttAtgcca 1415862 1416032 R ydaE ydaEp3 Sigma38 0 1416125 1416132 TATATATT 1416120 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaacTATATATTcgtaAcctga 1416695 1417183 F sieB sieBp4 Sigma38 0 1416667 1416674 AATACCCT 1416679 2.78 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttcAATACCCTtacaGttgag 1416695 1417183 F sieB sieBp5 Sigma38 0 1416480 1416487 ACTACACA 1416493 3.81 good homology 0.00381048 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaggACTACACAcagcaAtgtcg 1417789 1418265 R racR racRp1 Sigma38 0 1418479 1418486 TTTACGCT 1418473 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgaTTTACGCTtggagGtgata 1418389 1418685 F ydaS ydaSp5 Sigma38 0 1418304 1418311 CCTACCCT 1418316 4.72 high homology 0.001320163 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caatcCCTACCCTtactGcatta 1421424 1421609 F rzoR rzoRp1 Sigma38 0 1421313 1421320 GCGACAAA 1421327 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acagcGCGACAAAaatgccAgagaa 1421424 1421609 F rzoR rzoRp2 Sigma38 0 1421188 1421195 GCGATAAT 1421201 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accggGCGATAATttaccAgcaga 1421424 1421609 F rzoR rzoRp3 Sigma38 0 1421298 1421305 CCTACAAA 1421311 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catcgCCTACAAAgaacaGcgcga 1421806 1423263 F trkG trkGp6 Sigma38 0 1421676 1421683 ACTACAAT 1421688 4.67 high homology 0.001360368 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcttaACTACAATatgaTtcatt 1423401 1423664 F ynaK ynaKp1 Sigma38 0 1423324 1423331 CCTAACTT 1423337 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caataCCTAACTTtaccaGcaaca 1423401 1423664 F ynaK ynaKp5 Sigma38 0 1423192 1423199 GCTATGAT 1423205 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcataGCTATGATtcttgGtcgcc 1425770 1426750 R insH insHp2 Sigma38 0 1426902 1426909 GTTAAACT 1426897 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcggGTTAAACTgcacGccagc 1431108 1431698 R pinR pinRp5 Sigma38 0 1431911 1431918 GCAACACT 1431905 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacacGCAACACTattctTcttcc 1432015 1432281 R ynaE ynaEp3 Sigma38 0 1432499 1432506 TCTACGAA 1432493 2.95 poor homology 0.009186686 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttaTCTACGAActttaAgaaca 1432015 1432281 R ynaE ynaEp4 Sigma38 0 1432288 1432295 CATACAAT 1432282 3.37 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagaCATACAATatcgcAatgaa 1433784 1434917 R ompN ompNp2 Sigma38 0 1435067 1435074 ACCAGACT 1435062 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattcACCAGACTtattAtcatt 1433784 1434917 R ompN ompNp7 Sigma38 0 1435076 1435083 GATACATT 1435070 5.21 high homology 0.000696112 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcttcGATACATTcaccaGactta 1435284 1438808 R ydbK ydbKp2 Sigma38 0 1438901 1438908 GCGAAAAT 1438895 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caaaaGCGAAAATgcagaAgaaag 1435284 1438808 R ydbK ydbKp3 Sigma38 0 1438962 1438969 GCTATTTT 1438957 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatgGCTATTTTtttgCcctct 1435284 1438808 R ydbK ydbKp5 Sigma38 0 1438876 1438883 GCTAAAAT 1438870 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catttGCTAAAATtgaaaGattac 1441075 1443714 F ydbH ydbHp2 Sigma38 0 1440902 1440909 GCTACTAA 1440914 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttaaGCTACTAAaaatAtttta 1441075 1443714 F ydbH ydbHp5 Sigma38 0 1440973 1440980 ACTATGCT 1440985 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caacaACTATGCTtagtGtaggc 1441075 1443714 F ydbH ydbHp6 Sigma38 0 1440949 1440956 GCGATATT 1440962 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctatgGCGATATTgaaaaAttcat 1441075 1443714 F ydbH ydbHp8 Sigma38 0 1440847 1440854 GCTATAAA 1440860 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgtGCTATAAAcggcgAgtttc 1441075 1443714 F ydbH ydbHp10 Sigma38 0 1441018 1441025 GCCACAAT 1441030 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacatGCCACAATacccGtattg 1467382 1468533 F insI insIp2 Sigma38 0 1467296 1467303 GCGAAAAT 1467309 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccggtGCGAAAATtgttaAtaaag 1472245 1473105 F ydbC ydbCp2 Sigma38 0 1472199 1472206 TCTATACT 1472212 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgttTCTATACTgatttTtctta 1475645 1476250 F ynbA ynbAp6 Sigma38 0 1475549 1475556 GATATATT 1475561 3.63 good homology 0.004748151 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accttGATATATTctgaAttttt 1475645 1476250 F ynbA ynbAp8 Sigma38 0 1475556 1475563 TCTGAATT 1475568 4.01 good homology 0.003182781 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatatTCTGAATTtttaAtgaaa 1481085 1484987 F hrpA hrpAp2 Sigma38 0 1480980 1480987 CCTATGTT 1480992 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaagCCTATGTTcgaaTttatt 1481085 1484987 F hrpA hrpAp3 Sigma38 0 1481035 1481042 TCTATCAT 1481048 3.04 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctataTCTATCATttaaaAgaaaa 1481085 1484987 F hrpA hrpAp4 Sigma38 0 1481014 1481021 GCCGCGAT 1481027 3.32 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaaaGCCGCGATgtggtActcta 1481085 1484987 F hrpA hrpAp5 Sigma38 0 1480855 1480862 GCTGGATT 1480868 5.16 high homology 0.000731802 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggatGCTGGATTtaagaActaat 1485259 1486059 F ydcF ydcFp1 Sigma38 0 1485089 1485096 AATACAAT 1485102 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaaaAATACAATtctctGctgca 1489701 1489874 F ydcA ydcAp2 Sigma38 0 1489588 1489595 TCTGGCTT 1489602 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtccaTCTGGCTTatttttAatcaa 1489701 1489874 F ydcA ydcAp4 Sigma38 0 1489476 1489483 CCTGTACT 1489490 3.79 good homology 0.003848776 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaacgCCTGTACTaaaaccGacccg 1489946 1490095 R hokB hokBp3 Sigma38 0 1490335 1490342 GCTAAACT 1490329 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatgGCTAAACTggctaAcccga 1489986 1490153 R mokB mokBp4 Sigma38 0 1490335 1490342 GCTAAACT 1490329 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatgGCTAAACTggctaAcccga 1490143 1490198 F sokB sokBp2 Sigma38 0 1490128 1490135 GCTAAGAT 1490140 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagagGCTAAGATctgaAttgct 1493312 1494655 F ydcJ ydcJp2 Sigma38 0 1493149 1493156 GATAACTT 1493161 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attatGATAACTTgattGcaaaa 1493312 1494655 F ydcJ ydcJp7 Sigma38 0 1493281 1493288 TCCAGATT 1493293 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacacTCCAGATTactgAccact 1493312 1494655 F ydcJ ydcJp12 Sigma38 0 1493274 1493281 CCTACACT 1493286 5.78 high homology 0.000205513 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttaCCTACACTccagAttact 1496675 1496899 F ydcH ydcHp4 Sigma38 0 1496604 1496611 CCTAAGTT 1496617 2.66 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcCCTAAGTTaaatgAgtaat 1496675 1496899 F ydcH ydcHp5 Sigma38 0 1496433 1496440 TCTACGTT 1496446 4.93 high homology 0.000939653 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgtaTCTACGTTgtcagGgggac 1497493 1498473 R ydcK ydcKp2 Sigma38 0 1498502 1498509 GCTACGGT 1498497 2.55 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatttGCTACGGTtataGtaagt 1501741 1502889 F insQ insQp2 Sigma38 0 1501516 1501523 CATACATT 1501529 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcaCATACATTtgaaaAgtaag 1502929 1504104 R ydcO ydcOp1 Sigma38 0 1504134 1504141 GCTACGGT 1504129 2.55 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caaatGCTACGGTgcctGtacgc 1502929 1504104 R ydcO ydcOp2 Sigma38 0 1504202 1504209 GCGAGATT 1504197 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcgaGCGAGATTttccAtgcga 1504196 1504732 F ydcN ydcNp2 Sigma38 0 1504014 1504021 GCCAGATT 1504028 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcttGCCAGATTattgccGctgaa 1504196 1504732 F ydcN ydcNp3 Sigma38 0 1504166 1504173 GATAAACT 1504178 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caagtGATAAACTtccgTtttgc 1504196 1504732 F ydcN ydcNp4 Sigma38 0 1503998 1504005 GCGACAAT 1504010 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctccgGCGACAATcgctGcttgc 1504805 1506766 F ydcP ydcPp4 Sigma38 0 1504766 1504773 GCTAAAAT 1504778 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtgGCTAAAATagccGccatt 1506858 1507088 R yncJ yncJp4 Sigma38 0 1507175 1507182 TCCAGAAT 1507168 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagatTCCAGAATttctttGcgcta 1506858 1507088 R yncJ yncJp5 Sigma38 0 1507159 1507166 GCTAATTT 1507153 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgcGCTAATTTgcaaaActgaa 1509678 1510823 F ydcS ydcSp5 Sigma38 0 1509521 1509528 GATAACCT 1509534 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagaaGATAACCTtacagAcggca 1509678 1510823 F ydcS ydcSp8 Sigma38 0 1509507 1509514 ACTATACT 1509520 3.89 good homology 0.003517517 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccttgACTATACTccagaAgataa 1513602 1515026 F prr prrp5 Sigma38 0 1513564 1513571 GCGACAAT 1513577 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaagGCGACAATggtcaAtaacc 1515123 1515218 R yncL yncLp2 Sigma38 0 1515246 1515253 TATACACA 1515240 3.19 poor homology 0.007446583 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtacTATACACAtagggGcaatg 1515413 1515586 F ydcX ydcXp8 Sigma38 0 1515223 1515230 GCCACCTT 1515236 4.07 good homology 0.002938077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCCACCTTttatcAttgcc 1515672 1515905 F ydcY ydcYp2 Sigma38 0 1515641 1515648 GATAAATT 1515654 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatcGATAAATTtcacaAgtggc 1515906 1516355 R ydcZ ydcZp2 Sigma38 0 1516425 1516432 ACTAAATT 1516419 3.41 poor homology 0.0057417 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taggcACTAAATTtggtcGttggc 1517051 1518088 F yncB yncBp2 Sigma38 0 1516816 1516823 TATAAATT 1516829 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtggtTATAAATTtccgcAatggc 1517051 1518088 F yncB yncBp3 Sigma38 0 1517009 1517016 GCTACTAT 1517022 4.18 good homology 0.002454088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcctGCTACTATtgatgGattca 1518987 1521089 R yncD yncDp6 Sigma38 0 1521136 1521143 TTTACAAT 1521129 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataaaTTTACAATttcattAccatg 1518987 1521089 R yncD yncDp8 Sigma38 0 1521259 1521266 GTTACGCT 1521252 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatcGTTACGCTcttgttAtaaat 1518987 1521089 R yncD yncDp10 Sigma38 0 1521188 1521195 ACTACAAT 1521181 4.67 high homology 0.001360368 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttacgACTACAATtttctcAattac 1524964 1525176 F yncH yncHp5 Sigma38 0 1524933 1524940 TCCACAAT 1524946 3.98 good homology 0.003247077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttaTCCACAATgatggGcgtaa 1527946 1528428 F ydcD ydcDp1 Sigma38 0 1527759 1527766 GATAGACA 1527772 2.76 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagggGATAGACAaggtcAgccag 1531306 1531875 R yddH yddHp6 Sigma38 0 1531984 1531991 GCTATTTT 1531978 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caccgGCTATTTTgtgcgAtcgcg 1531306 1531875 R yddH yddHp9 Sigma38 0 1531905 1531912 ACTACGCT 1531899 4.39 good homology 0.002009237 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacggACTACGCTtaaaaAaacct 1532048 1532893 F nhoA nhoAp1 Sigma38 0 1531971 1531978 TCCGCGAT 1531984 2.49 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcatgTCCGCGATcgcacAaaata 1532048 1532893 F nhoA nhoAp3 Sigma38 0 1531837 1531844 GCTGGCAT 1531850 3.78 good homology 0.003965989 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agacgGCTGGCATggtgtAattct 1532989 1533882 R yddE yddEp2 Sigma38 0 1533960 1533967 GCGATAAT 1533955 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgcgGCGATAATttcaCcctgg 1532989 1533882 R yddE yddEp7 Sigma38 0 1533909 1533916 GCTATGAT 1533903 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcagGCTATGATagttcTccagt 1533961 1534641 R narV narVp3 Sigma38 0 1534694 1534701 GCGACGCT 1534687 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcaGCGACGCTttagccAggatg 1542408 1542743 R yddJ yddJp7 Sigma38 0 1542845 1542852 CCCACATT 1542838 3.61 good homology 0.004892754 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aataaCCCACATTgatactAataat 1550852 1551862 R adhP adhPp3 Sigma38 0 1551888 1551895 GCTATGCA 1551883 2.99 poor homology 0.008738646 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacctGCTATGCAgaacAtcatc 1550852 1551862 R adhP adhPp4 Sigma38 0 1551930 1551937 TCCATACT 1551924 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctcaTCCATACTgggtaGtggcg 1555136 1556062 R ddpF ddpFp1 Sigma38 0 1556281 1556288 TATACCAT 1556274 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atccgTATACCATtggtttGctgca 1565528 1566847 R yddW yddWp1 Sigma38 0 1566941 1566948 GCGATAAT 1566935 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agggaGCGATAATtcatcGctccc 1565528 1566847 R yddW yddWp4 Sigma38 0 1567002 1567009 ACTATATT 1566996 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accacACTATATTgtgatGaatga 1565528 1566847 R yddW yddWp5 Sigma38 0 1567007 1567014 ACCACACT 1567001 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttcACCACACTatattGtgatg 1566978 1568513 R gadC gadCp3 Sigma38 0 1568566 1568573 AATACGCT 1568560 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttctgAATACGCTtcagaAcaaaa 1566978 1568513 R gadC gadCp4 Sigma38 0 1568744 1568751 ACTACAAA 1568738 3.01 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggaagACTACAAAgcctcCctgaa 1570431 1573226 R pqqL pqqLp2 Sigma38 0 1573414 1573421 GCCACAAT 1573409 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggacGCCACAATttctGcaaca 1573271 1575643 R yddB yddBp2 Sigma38 0 1575764 1575771 ACTACCCA 1575758 2.74 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaaaACTACCCAcaagcGgcgtc 1573271 1575643 R yddB yddBp3 Sigma38 0 1575739 1575746 GTTACACA 1575734 2.83 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatgGTTACACAtcaaCccggt 1577657 1578814 R ydeM ydeMp2 Sigma38 0 1579005 1579012 GATAACCT 1579000 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaGATAACCTtgccGccgcc 1577657 1578814 R ydeM ydeMp4 Sigma38 0 1579034 1579041 TCTACAAA 1579028 4.02 good homology 0.003088715 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggtcTCTACAAActgacGgatct 1585817 1586320 R ydeR ydeRp3 Sigma38 0 1586346 1586353 TTTACCCT 1586341 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caaccTTTACCCTtgaaTttcaa 1588878 1590200 R hipA hipAp2 Sigma38 0 1590417 1590424 AATGCAAT 1590410 2.63 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcgAATGCAATgaaactGgttcg 1588878 1590200 R hipA hipAp3 Sigma38 0 1590297 1590304 ACGACATT 1590291 2.68 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgctcACGACATTttttaAgattt 1588878 1590200 R hipA hipAp4 Sigma38 0 1590306 1590313 ACCACGCT 1590301 2.69 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaatACCACGCTcacgAcattt 1588878 1590200 R hipA hipAp6 Sigma38 0 1590342 1590349 GCGACGAT 1590336 3.12 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcagGCGACGATttccaAtttcg 1588878 1590200 R hipA hipAp7 Sigma38 0 1590229 1590236 GCCAGAAT 1590223 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcctcGCCAGAATcaacaGaacag 1608931 1609878 R yneF yneFp5 Sigma38 0 1609915 1609922 GCTATCTT 1609909 4.19 good homology 0.002381559 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacatGCTATCTTggttcGgtcag 1611339 1612727 R sad sadp2 Sigma38 0 1612868 1612875 GCCAGCTT 1612862 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgctGCCAGCTTcggcaAccgcg 1612828 1613709 F yneJ yneJp3 Sigma38 0 1612760 1612767 GATACGCA 1612773 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgaaGATACGCAgatttActctt 1613787 1614902 F yneK yneKp2 Sigma38 0 1613742 1613749 TCTATATA 1613755 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatgcTCTATATAgtgatGttccg 1613787 1614902 F yneK yneKp3 Sigma38 0 1613710 1613717 GCTATTTT 1613723 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatgaGCTATTTTtgataGttctt 1619356 1620543 F ydeE ydeEp2 Sigma38 0 1619294 1619301 GCCATGCT 1619307 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCCATGCTatttcTttaca 1619356 1620543 F ydeE ydeEp5 Sigma38 0 1619155 1619162 GCGACATT 1619168 4.52 high homology 0.001612451 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcGCGACATTctaccGcctct 1619356 1620543 F ydeE ydeEp6 Sigma38 0 1619276 1619283 GCTATACT 1619288 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtcGCTATACTtcggAttttt 1622129 1622521 R ydeI ydeIp2 Sigma38 0 1622557 1622564 ACCAGACT 1622551 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagcaACCAGACTtaataAgtcaa 1623359 1625404 R dcp dcpp1 Sigma38 0 1625617 1625624 GATAACTT 1625612 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtggcGATAACTTtatgCccttg 1623359 1625404 R dcp dcpp5 Sigma38 0 1625434 1625441 CCTACGCT 1625428 4.71 high homology 0.001333431 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaagCCTACGCTatggaAcacct 1627477 1628937 R ydfI ydfIp6 Sigma38 0 1628956 1628963 GCCATATT 1628951 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcttGCCATATTtataTttaag 1631063 1631329 F ydfK ydfKp3 Sigma38 0 1630838 1630845 TCTACGAA 1630851 2.95 poor homology 0.009186686 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttaTCTACGAActttaAgaaca 1631063 1631329 F ydfK ydfKp4 Sigma38 0 1631049 1631056 CATACAAT 1631062 3.37 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagaCATACAATatcgcAatgaa 1631646 1632236 F pinQ pinQp5 Sigma38 0 1631426 1631433 GCAACACT 1631439 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacacGCAACACTattctTcttcc 1632334 1632909 R tfaQ tfaQp3 Sigma38 0 1632924 1632931 ACTATATT 1632918 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaACTATATTgtgagGcttgc 1632334 1632909 R tfaQ tfaQp5 Sigma38 0 1633128 1633135 GCCAGACT 1633123 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagtgGCCAGACTcgtaAtgcag 1634780 1635013 F ynfO ynfOp3 Sigma38 0 1634632 1634639 TCTACATA 1634645 4.34 good homology 0.002112253 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcaTCTACATAtcacaAcgtgc 1634780 1635013 F ynfO ynfOp4 Sigma38 0 1634755 1634762 GCGACACT 1634767 4.99 high homology 0.000800719 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcaGCGACACTgaatAcgggg 1637054 1637551 R rzpQ rzpQp1 Sigma38 0 1637714 1637721 TCGACGTT 1637708 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcccgTCGACGTTttataAgcggc 1639879 1640091 F cspF cspFp1 Sigma38 0 1639794 1639801 GCCATCTT 1639808 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atccaGCCATCTTcaacccCatcaa 1643921 1644226 F ydfV ydfVp2 Sigma38 0 1643783 1643790 GATATACT 1643796 4.11 good homology 0.002739445 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagcGATATACTcgagcAtgaga 1643921 1644226 F ydfV ydfVp3 Sigma38 0 1643888 1643895 GCTACCCA 1643902 4.58 high homology 0.00148848 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaatGCTACCCAtgtcttAcacct 1645958 1646365 F dicA dicAp3 Sigma38 0 1645788 1645795 GCTATAAA 1645801 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttccaGCTATAAAgcgaaGccaaa 1645958 1646365 F dicA dicAp4 Sigma38 0 1645758 1645765 GCGACCTT 1645771 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcgcGCGACCTTcgggaActaaa 1646532 1646687 F ydfA ydfAp2 Sigma38 0 1646432 1646439 GATATGTT 1646444 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaccGATATGTTagtcAtggct 1646532 1646687 F ydfA ydfAp4 Sigma38 0 1646282 1646289 GCCGAAAT 1646294 2.81 poor homology 0.010462059 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agctcGCCGAAATgcgaGctcga 1646532 1646687 F ydfA ydfAp7 Sigma38 0 1646447 1646454 GCTAATCT 1646460 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatgGCTAATCTtgtttGcatca 1647406 1647458 F dicF dicFp2 Sigma38 0 1647360 1647367 CATACGCT 1647373 3.09 poor homology 0.008066787 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgacCATACGCTtaagtGacaac 1647406 1647458 F dicF dicFp4 Sigma38 0 1647235 1647242 GATAGCCT 1647249 3.36 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcataGATAGCCTgtcgttAaattt 1653371 1653697 R ynfA ynfAp6 Sigma38 0 1653938 1653945 GCCAGACT 1653932 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgtcGCCAGACTcaatcAccagt 1654771 1655481 R ynfC ynfCp1 Sigma38 0 1655562 1655569 GATAACTT 1655556 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgaaGATAACTTctttaAgcata 1654771 1655481 R ynfC ynfCp7 Sigma38 0 1655494 1655501 TCTACTCT 1655488 4.15 good homology 0.002605841 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatcTCTACTCTctggtGactgt 1654771 1655481 R ynfC ynfCp8 Sigma38 0 1655516 1655523 GCTACTAT 1655510 4.18 good homology 0.002454088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatttGCTACTATgattgAgaatc 1655589 1655894 F ynfD ynfDp7 Sigma38 0 1655549 1655556 GCTATGCT 1655562 4.66 high homology 0.001401797 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaatGCTATGCTtaaagAagtta 1663339 1664595 F clcB clcBp3 Sigma38 0 1663140 1663147 GATAGGAT 1663152 2.56 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttcGATAGGATcaccGtaata 1663339 1664595 F clcB clcBp4 Sigma38 0 1663311 1663318 TCTACACA 1663323 4.82 high homology 0.001206538 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catcaTCTACACAtctaTccgga 1664548 1665243 R ynfK ynfKp3 Sigma38 0 1665346 1665353 TCTACCAA 1665340 2.96 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgtTCTACCAAaatttGcgcta 1666723 1667616 R ynfL ynfLp3 Sigma38 0 1667679 1667686 TATACATA 1667673 2.72 poor homology 0.011220644 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggctTATACATAgggtaGgaaaa 1666723 1667616 R ynfL ynfLp5 Sigma38 0 1667704 1667711 GCTAAATA 1667698 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccttGCTAAATAtgcctGtagat 1667723 1668976 F ynfM ynfMp6 Sigma38 0 1667672 1667679 CCTACCCT 1667684 4.72 high homology 0.001320163 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attttCCTACCCTatgtAtaagc 1670844 1671173 R mdtI mdtIp3 Sigma38 0 1671242 1671249 ACCACCCT 1671237 2.7 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttaACCACCCTggtcGccggg 1670844 1671173 R mdtI mdtIp4 Sigma38 0 1671386 1671393 TATATATT 1671380 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtcgTATATATTtctctCtttcg 1670844 1671173 R mdtI mdtIp6 Sigma38 0 1671216 1671223 GATAAAAT 1671210 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgttGATAAAATcaggtAcccgt 1672996 1674384 R pntB pntBp4 Sigma38 0 1674456 1674463 GCCAGCAT 1674451 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttataGCCAGCATtaatAttttc 1676451 1677395 F ydgH ydgHp6 Sigma38 0 1676243 1676250 TATACAAT 1676257 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taactTATACAATtcagttGcttca 1676451 1677395 F ydgH ydgHp7 Sigma38 0 1676389 1676396 GCCACGTT 1676401 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcaGCCACGTTtctcGttaat 1677581 1678963 F ydgI ydgIp3 Sigma38 0 1677461 1677468 GCGACCAT 1677474 3.13 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccccGCGACCATtgcatGcagac 1679719 1680054 R ydgC ydgCp2 Sigma38 0 1680110 1680117 TCTAAACA 1680103 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgttTCTAAACAagttttCatcag 1682283 1683212 F tus tusp5 Sigma38 0 1682243 1682250 GCTATAAA 1682255 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgtGCTATAAAataaGtatgt 1700257 1701258 F add addp2 Sigma38 0 1700090 1700097 CCCACGTT 1700102 2.53 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggctgCCCACGTTcgaaActgga 1700257 1701258 F add addp4 Sigma38 0 1700097 1700104 TCGAAACT 1700110 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacgtTCGAAACTggaaaAaggtg 1700257 1701258 F add addp5 Sigma38 0 1700197 1700204 TTTACCCT 1700210 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggattTTTACCCTgctttGttttt 1701292 1702332 R ydgJ ydgJp4 Sigma38 0 1702442 1702449 GCTATTTT 1702437 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattcGCTATTTTtttgActtaa 1701292 1702332 R ydgJ ydgJp5 Sigma38 0 1702473 1702480 GCGATATT 1702467 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCGATATTtagctTttgtc 1716090 1716419 R mliC mliCp2 Sigma38 0 1716533 1716540 GCTATTTT 1716528 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggggGCTATTTTccccGctaac 1716090 1716419 R mliC mliCp4 Sigma38 0 1716472 1716479 GTTACACT 1716467 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgccGTTACACTtggaAcgtta 1716517 1717626 R anmK anmKp5 Sigma38 0 1717865 1717872 GCCACGCA 1717860 2.87 poor homology 0.010051836 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaacGCCACGCAagcaTccctc 1716517 1717626 R anmK anmKp6 Sigma38 0 1717805 1717812 TCTACCAA 1717799 2.96 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catgtTCTACCAAatatgAgcaaa 1718414 1718848 R slyA slyAp2 Sigma38 0 1719053 1719060 CATAAACT 1719047 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgagCATAAACTtcacaAagtag 1718414 1718848 R slyA slyAp3 Sigma38 0 1719009 1719016 GTTAGATT 1719003 2.75 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgcGTTAGATTaataaAtattc 1718414 1718848 R slyA slyAp8 Sigma38 0 1718910 1718917 AATACAAT 1718905 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttagcAATACAATtgctGcacac 1718414 1718848 R slyA slyAp9 Sigma38 0 1718882 1718889 GCCGCATA 1718875 3.06 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaaaGCCGCATAatatctTagcaa 1718414 1718848 R slyA slyAp11 Sigma38 0 1718927 1718934 AATACATT 1718920 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcagcAATACATTtgttttAgcaat 1718414 1718848 R slyA slyAp12 Sigma38 0 1719064 1719071 GTTGCATT 1719059 3.6 good homology 0.004941927 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcctGTTGCATTgagcAtaaac 1718414 1718848 R slyA slyAp15 Sigma38 0 1718901 1718908 GCTGCACA 1718894 5.24 high homology 0.000649051 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caattGCTGCACActattcTaaaag 1723705 1723944 R ydhL ydhLp2 Sigma38 0 1724114 1724121 TCCACGTT 1724109 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgaaTCCACGTTgcagGcaaag 1723705 1723944 R ydhL ydhLp4 Sigma38 0 1723995 1724002 GCTACTTT 1723990 4.51 high homology 0.001712159 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagttGCTACTTTggacAttaac 1734145 1735314 R ydhP ydhPp2 Sigma38 0 1735356 1735363 GCCACTTT 1735350 2.8 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttcGCCACTTTaatgaAtatcg 1736890 1737822 R ydhB ydhBp3 Sigma38 0 1738003 1738010 GATACATA 1737996 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggcaGATACATAtcggttGccaga 1736890 1737822 R ydhB ydhBp5 Sigma38 0 1737958 1737965 GCCAGACT 1737953 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgccaGCCAGACTaaaaAtcttt 1737935 1739146 F ydhC ydhCp3 Sigma38 0 1737693 1737700 GCCACTCT 1737705 3.28 poor homology 0.006805664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgccaGCCACTCTtccaGctgac 1737935 1739146 F ydhC ydhCp4 Sigma38 0 1737769 1737776 ACTACCAT 1737782 3.61 good homology 0.004941927 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctaaaACTACCATtacgcGctacc 1737935 1739146 F ydhC ydhCp7 Sigma38 0 1737889 1737896 CCTACACT 1737902 5.78 high homology 0.000205513 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cactcCCTACACTttgcgGcggtg 1740625 1741266 R ribC ribCp6 Sigma38 0 1741488 1741495 GATATACT 1741482 4.11 good homology 0.002739445 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcactGATATACTtctgcAcgtga 1741481 1742854 F mdtK mdtKp2 Sigma38 0 1741391 1741398 AATAGACT 1741404 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctacAATAGACTgaattTcccct 1741481 1742854 F mdtK mdtKp4 Sigma38 0 1741353 1741360 GCTATTTT 1741367 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatgGCTATTTTttcactGgagaa 1741481 1742854 F mdtK mdtKp5 Sigma38 0 1741459 1741466 ACTACAAA 1741472 3.01 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atataACTACAAAtaaaaGgtgtt 1741481 1742854 F mdtK mdtKp11 Sigma38 0 1741386 1741393 GCTACAAT 1741399 6.51 high homology 6.13E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctcGCTACAATagactGaattt 1744724 1745029 F ydhR ydhRp3 Sigma38 0 1744683 1744690 TTTACACT 1744697 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagaTTTACACTgtcttcGtatgc 1745155 1746759 F ydhS ydhSp4 Sigma38 0 1745120 1745127 ACTAAATT 1745133 3.41 poor homology 0.0057417 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataacACTAAATTcgaaaGaatgc 1746771 1747583 R ydhT ydhTp4 Sigma38 0 1747818 1747825 CCTATGTT 1747811 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtcgCCTATGTTggtgtcAtgtat 1746771 1747583 R ydhT ydhTp5 Sigma38 0 1747703 1747710 GACACATT 1747696 3.51 good homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgcaGACACATTttgctcTggcat 1752956 1753165 R ydhZ ydhZp1 Sigma38 0 1753206 1753213 GTTAGATT 1753200 2.75 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattgGTTAGATTgatatAtgctg 1752956 1753165 R ydhZ ydhZp3 Sigma38 0 1753267 1753274 GCTACAGT 1753262 3.62 good homology 0.00484407 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caattGCTACAGTtaaaAtaatt 1755745 1756749 R ynhG ynhGp5 Sigma38 0 1756839 1756846 TTTACACT 1756833 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caatgTTTACACTgacctGcacag 1755745 1756749 R ynhG ynhGp6 Sigma38 0 1756895 1756902 GCTAAACT 1756889 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttaGCTAAACTaaaagGacagc 1762737 1762804 R rydB rydBp3 Sigma38 0 1762982 1762989 TCTACTTT 1762976 3.68 good homology 0.004561973 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaaaTCTACTTTgcctgGcgtct 1767098 1768210 F ydiK ydiKp4 Sigma38 0 1766951 1766958 ACCACATT 1766965 3.29 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttgtACCACATTtttttcTaacac 1769095 1770309 F ydiM ydiMp3 Sigma38 0 1769081 1769088 GCTAAGTA 1769095 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctttGCTAAGTAgaacctAtgaaa 1769095 1770309 F ydiM ydiMp6 Sigma38 0 1768907 1768914 TCTACCCT 1768919 5.41 high homology 0.000448321 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgagTCTACCCTgatgGcaatt 1770536 1771801 F ydiN ydiNp3 Sigma38 0 1770364 1770371 GCTAACTA 1770377 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgcGCTAACTAaggaaAatcgc 1770536 1771801 F ydiN ydiNp4 Sigma38 0 1770421 1770428 CATAAACT 1770433 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggaaaCATAAACTttatGccatg 1777641 1778405 F ydiQ ydiQp3 Sigma38 0 1777467 1777474 ACTATATT 1777480 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaataACTATATTgccgcAaattg 1777641 1778405 F ydiQ ydiQp4 Sigma38 0 1777431 1777438 TTTACACT 1777443 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattaTTTACACTgaatGcaaga 1777641 1778405 F ydiQ ydiQp5 Sigma38 0 1777417 1777424 GCTAAACA 1777430 4.06 good homology 0.002967605 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgagaGCTAAACAagattAtttac 1785469 1786302 F ppsR ppsRp4 Sigma38 0 1785304 1785311 TCCACATA 1785316 2.64 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caattTCCACATAaaccAtcggt 1785469 1786302 F ppsR ppsRp5 Sigma38 0 1785295 1785302 TCGACAAT 1785307 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctctTCGACAATttccAcataa 1785469 1786302 F ppsR ppsRp9 Sigma38 0 1785402 1785409 TCTACGCT 1785415 5.4 high homology 0.000461975 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgtTCTACGCTtctgtGcgttt 1787637 1787828 F ydiE ydiEp4 Sigma38 0 1787585 1787592 GCCATAAT 1787597 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtcaGCCATAATattgAtaata 1790291 1790755 R nlpC nlpCp4 Sigma38 0 1790790 1790797 GCTAAATT 1790784 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgacGCTAAATTaatgcAagaat 1803189 1803296 F yniD yniDp5 Sigma38 0 1803040 1803047 GATACATA 1803053 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatcGATACATAattttAttttt 1803189 1803296 F yniD yniDp7 Sigma38 0 1803145 1803152 GTTACACT 1803158 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttttGTTACACTccgttAtcacg 1803349 1804107 R ydiY ydiYp7 Sigma38 0 1804190 1804197 GTTACCTT 1804184 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattcGTTACCTTtccagGgacgc 1803349 1804107 R ydiY ydiYp8 Sigma38 0 1804227 1804234 AATACATT 1804221 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataagAATACATTgctaaGttatt 1803349 1804107 R ydiY ydiYp9 Sigma38 0 1804173 1804180 GCTAATCT 1804168 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggacGCTAATCTttgaTcctta 1803349 1804107 R ydiY ydiYp10 Sigma38 0 1804219 1804226 GCTAAGTT 1804214 4.18 good homology 0.002478752 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acattGCTAAGTTattcGcgcct 1805424 1805714 F ydiZ ydiZp3 Sigma38 0 1805301 1805308 TTTACGCT 1805314 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaTTTACGCTtacctTtcccg 1805424 1805714 F ydiZ ydiZp4 Sigma38 0 1805385 1805392 ACTATGCT 1805398 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctccgACTATGCTcaaaaGtcatg 1805424 1805714 F ydiZ ydiZp5 Sigma38 0 1805288 1805295 GATACGCA 1805300 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgacGATACGCAaaaaAtttac 1805424 1805714 F ydiZ ydiZp6 Sigma38 0 1805249 1805256 GCCACACT 1805262 5.6 high homology 0.000349153 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgcaGCCACACTcaatcAgggaa 1805820 1806680 F yniA yniAp3 Sigma38 0 1805767 1805774 ACCGCATT 1805780 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttacACCGCATTcttgcGctaac 1805820 1806680 F yniA yniAp4 Sigma38 0 1805664 1805671 CCTGAAAT 1805676 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagatCCTGAAATcaccAtcacg 1805820 1806680 F yniA yniAp6 Sigma38 0 1805780 1805787 GCTAACCT 1805792 4.66 high homology 0.001387849 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttgcGCTAACCTtatgAtctgg 1808958 1810349 F ydjN ydjNp4 Sigma38 0 1808918 1808925 GCTACGCA 1808931 4.57 high homology 0.001533811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgactGCTACGCAgtgatAgaaat 1810353 1811156 R ydjO ydjOp3 Sigma38 0 1811252 1811259 GCTATTTT 1811246 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgaGCTATTTTtgataGttcat 1810353 1811156 R ydjO ydjOp6 Sigma38 0 1811326 1811333 GCTATAAA 1811320 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctattGCTATAAAtaagtGatctt 1810353 1811156 R ydjO ydjOp11 Sigma38 0 1811378 1811385 GCTACATT 1811372 6.83 high homology 4.19E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgttGCTACATTcattcAaacca 1814410 1815159 R chbG chbGp3 Sigma38 0 1815210 1815217 GCCAAACT 1815204 4.02 good homology 0.003057982 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctGCCAAACTttgccGactgc 1823979 1824947 R astE astEp4 Sigma38 0 1825115 1825122 GATACGCT 1825109 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaacGATACGCTgtttaAtgcgc 1831425 1832135 F ydjX ydjXp2 Sigma38 0 1831254 1831261 GCTAATTT 1831266 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgccGCTAATTTagcaGctctc 1831425 1832135 F ydjX ydjXp3 Sigma38 0 1831241 1831248 GCGACCTT 1831254 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctggGCGACCTTccgccGctaat 1838807 1839427 R ynjF ynjFp5 Sigma38 0 1839476 1839483 GCCATAAT 1839471 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatGCCATAATatccGcactg 1841855 1842895 R ynjI ynjIp2 Sigma38 0 1842931 1842938 GATAAAAT 1842926 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcatgGATAAAATtatcGcctct 1843023 1844984 R topB topBp1 Sigma38 0 1845187 1845194 GCTACGGT 1845181 2.55 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgccaGCTACGGTcatctGatggg 1846861 1848717 F sppA sppAp5 Sigma38 0 1846768 1846775 TCCGCAAT 1846780 3.57 good homology 0.005092431 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacagTCCGCAATtcctGctgac 1848884 1849900 F ansA ansAp1 Sigma38 0 1848844 1848851 TATATACT 1848856 3.27 poor homology 0.006874063 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcacgTATATACTtttgCtcttt 1848884 1849900 F ansA ansAp2 Sigma38 0 1848748 1848755 GCCACATT 1848762 5.13 high homology 0.000746586 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtcgGCCACATTatttttTacgtc 1850645 1852003 R ydjE ydjEp3 Sigma38 0 1852155 1852162 GATAGCAT 1852149 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagtgGATAGCATtttgcAaagac 1850645 1852003 R ydjE ydjEp4 Sigma38 0 1852244 1852251 TCTAAGTT 1852238 3.35 poor homology 0.00634556 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcacTCTAAGTTtgatcGcaaag 1850645 1852003 R ydjE ydjEp7 Sigma38 0 1852026 1852033 GCTACCTT 1852021 5.77 high homology 0.000218221 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caattGCTACCTTtttaGcaaat 1852120 1852878 R ydjF ydjFp2 Sigma38 0 1853093 1853100 GCGAAAAT 1853087 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtacGCGAAAATgtcgcGgcact 1852120 1852878 R ydjF ydjFp3 Sigma38 0 1852917 1852924 GCGATAAT 1852910 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttatGCGATAATcgcgctAatgtg 1852120 1852878 R ydjF ydjFp4 Sigma38 0 1853049 1853056 GCAACATT 1853043 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagacGCAACATTgatgaGggaaa 1853015 1853995 R ydjG ydjGp2 Sigma38 0 1854168 1854175 GATAACTT 1854161 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgggcGATAACTTtgcttcAggttt 1859726 1859998 R yeaC yeaCp1 Sigma38 0 1860078 1860085 TTTACGCT 1860072 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcctcTTTACGCTttaccGatggc 1859726 1859998 R yeaC yeaCp2 Sigma38 0 1860241 1860248 TCTACGAA 1860235 2.95 poor homology 0.009186686 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagttTCTACGAAccggtAagtga 1860040 1860453 R msrB msrBp3 Sigma38 0 1860696 1860703 GCGACAAA 1860691 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcattGCGACAAAtcaaTcctgt 1868409 1869884 F yeaI yeaIp4 Sigma38 0 1868328 1868335 CATACATT 1868341 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattaCATACATTagcttAcaatc 1870065 1871555 F yeaJ yeaJp1 Sigma38 0 1869902 1869909 GCCATGCT 1869914 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagaGCCATGCTttttGcgtgg 1870065 1871555 F yeaJ yeaJp3 Sigma38 0 1869926 1869933 CATACAAT 1869939 3.37 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttgCATACAATttattActatt 1870065 1871555 F yeaJ yeaJp4 Sigma38 0 1869948 1869955 CCTAAATT 1869961 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaccCCTAAATTtccccTcccca 1871598 1872101 F yeaK yeaKp7 Sigma38 0 1871554 1871561 GATAACCT 1871567 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcatGATAACCTtctgtGgttgt 1871598 1872101 F yeaK yeaKp8 Sigma38 0 1871478 1871485 GATACGTT 1871491 4.14 good homology 0.002658482 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaacGATACGTTacatgAtgcgt 1872102 1872206 R yoaI yoaIp1 Sigma38 0 1872331 1872338 TTTACGCT 1872326 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttacTTTACGCTtgctGcagga 1872779 1873600 R yeaM yeaMp4 Sigma38 0 1873609 1873616 GCTAAGTT 1873603 4.18 good homology 0.002478752 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcGCTAAGTTcggacAaaatg 1872779 1873600 R yeaM yeaMp5 Sigma38 0 1873628 1873635 GCTAAAAT 1873622 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcaaGCTAAAATgacaaAttatc 1873697 1874878 F yeaN yeaNp6 Sigma38 0 1873615 1873622 GCGATAAT 1873628 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttaGCGATAATttgtcAtttta 1874933 1875280 F yeaO yeaOp1 Sigma38 0 1874874 1874881 GCTAATAT 1874887 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattcGCTAATATccggtGctata 1874933 1875280 F yeaO yeaOp5 Sigma38 0 1874813 1874820 GCCATACT 1874827 4.02 good homology 0.003057982 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgttGCCATACTttcactActgat 1875302 1875556 R yoaF yoaFp2 Sigma38 0 1875799 1875806 ACCAGACT 1875793 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcggACCAGACTttccaGtgact 1875302 1875556 R yoaF yoaFp3 Sigma38 0 1875581 1875588 TCTAATCT 1875575 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatacTCTAATCTtggatAaatat 1875302 1875556 R yoaF yoaFp4 Sigma38 0 1875751 1875758 GCGATAAT 1875746 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcggGCGATAATctgaTctgac 1875302 1875556 R yoaF yoaFp8 Sigma38 0 1875586 1875593 GATACTCT 1875579 3.36 poor homology 0.00615802 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accgcGATACTCTaatcttGgataa 1875302 1875556 R yoaF yoaFp9 Sigma38 0 1875588 1875595 GCGATACT 1875583 3.41 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataccGCGATACTctaaTcttgg 1877031 1877279 R yeaQ yeaQp2 Sigma38 0 1877329 1877336 GCTATGCT 1877324 4.66 high homology 0.001401797 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttgtGCTATGCTttttAtcagc 1877427 1877609 R yoaG yoaGp2 Sigma38 0 1877805 1877812 GCTACGCT 1877799 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctcgGCTACGCTgatgaAcacag 1878910 1879833 R dmlR dmlRp2 Sigma38 0 1879885 1879892 CCTATAAT 1879879 3.41 poor homology 0.005799405 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accatCCTATAATtgactGaaaag 1879936 1881021 F dmlA dmlAp3 Sigma38 0 1879714 1879721 GATGCGCT 1879727 4.2 good homology 0.002334401 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaggcGATGCGCTtgctgAcgaac 1889349 1891259 R yoaA yoaAp2 Sigma38 0 1891340 1891347 GCCACAAT 1891334 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agactGCCACAATgtgagGtcgcc 1891391 1891735 F yoaB yoaBp3 Sigma38 0 1891255 1891262 GTCACACT 1891269 2.78 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtccGTCACACTacccccTgttga 1892157 1892456 F yoaC yoaCp5 Sigma38 0 1892115 1892122 TATAGCCT 1892128 2.53 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcataTATAGCCTtatcgAtaaca 1892157 1892456 F yoaC yoaCp8 Sigma38 0 1892027 1892034 GCTACCTT 1892039 5.77 high homology 0.000218221 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagctGCTACCTTtaaaAcacct 1892576 1892755 R yoaH yoaHp5 Sigma38 0 1892970 1892977 ACCACAAT 1892964 2.97 poor homology 0.008915179 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggcgACCACAATatcaaAgcggc 1892829 1894190 F pabB pabBp3 Sigma38 0 1892601 1892608 GCCACGAT 1892615 3.74 good homology 0.004127844 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgcGCCACGATtcgctcGccgga 1892829 1894190 F pabB pabBp5 Sigma38 0 1892767 1892774 GCTAAATT 1892779 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcctGCTAAATTgttgGcgcta 1902825 1903283 F yobD yobDp1 Sigma38 0 1902742 1902749 GTTACGCT 1902754 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgctgGTTACGCTtgcgGcctgc 1902825 1903283 F yobD yobDp3 Sigma38 0 1902610 1902617 TCCAGACT 1902623 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tactgTCCAGACTattctGgacca 1903712 1904278 F yebN yebNp2 Sigma38 0 1903508 1903515 TCCAGATT 1903521 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgattTCCAGATTccggaAatgta 1904275 1905084 R rlmA rlmAp3 Sigma38 0 1905182 1905189 GCGAGGCT 1905177 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaatGCGAGGCTttttActatg 1904275 1905084 R rlmA rlmAp4 Sigma38 0 1905218 1905225 AATACGCT 1905213 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgtgAATACGCTtcaaTctcgc 1904275 1905084 R rlmA rlmAp5 Sigma38 0 1905170 1905177 ACTATGCT 1905164 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttACTATGCTttatcTtcgct 1904275 1905084 R rlmA rlmAp6 Sigma38 0 1905106 1905113 GCGGCCTT 1905101 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacttGCGGCCTTtagtAtcctg 1904275 1905084 R rlmA rlmAp7 Sigma38 0 1905159 1905166 TCTTCGCT 1905154 3.08 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttaTCTTCGCTcctgGcgttc 1904275 1905084 R rlmA rlmAp8 Sigma38 0 1905202 1905209 GCTATAAA 1905196 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctcGCTATAAAgcctcGtcgaa 1904275 1905084 R rlmA rlmAp10 Sigma38 0 1905213 1905220 GCTTCAAT 1905206 4.18 good homology 0.002454088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatacGCTTCAATctcgctAtaaag 1904275 1905084 R rlmA rlmAp11 Sigma38 0 1905115 1905122 GTTACACT 1905110 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgcGTTACACTtgcgGccttt 1905250 1905459 R cspC cspCp5 Sigma38 0 1905668 1905675 GCCATAAT 1905663 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcttGCCATAATtaacGttgta 1905250 1905459 R cspC cspCp6 Sigma38 0 1905500 1905507 TCTATGTT 1905493 3.35 poor homology 0.00628242 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttaTCTATGTTatgcctGcgggc 1906285 1906572 R yebO yebOp1 Sigma38 0 1906584 1906591 TCTACTCA 1906578 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgccTCTACTCAgaggtGgtgaa 1906285 1906572 R yebO yebOp3 Sigma38 0 1906624 1906631 ACTAGATT 1906618 3.73 good homology 0.00416933 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagcACTAGATTttcttCctctc 1906949 1907188 F yobH yobHp2 Sigma38 0 1906776 1906783 TCGAAACT 1906789 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acccaTCGAAACTttttcActcca 1906949 1907188 F yobH yobHp6 Sigma38 0 1906807 1906814 CCTACCTT 1906820 4.25 good homology 0.002220551 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttcaCCTACCTTatgtcAttaaa 1906949 1907188 F yobH yobHp8 Sigma38 0 1906911 1906918 GCTACGAT 1906924 5.44 high homology 0.000435072 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgccGCTACGATtaagcGaacat 1907332 1908123 R kdgR kdgRp4 Sigma38 0 1908186 1908193 ACCACCCT 1908180 2.7 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgcgACCACCCTggtgcGaaatt 1907332 1908123 R kdgR kdgRp6 Sigma38 0 1908175 1908182 GCGAAATT 1908169 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctggtGCGAAATTataatAaaaaa 1908300 1909673 F yebQ yebQp3 Sigma38 0 1908217 1908224 GTTACAAT 1908230 3.69 good homology 0.004383096 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttaGTTACAATtctgcGacatc 1908300 1909673 F yebQ yebQp6 Sigma38 0 1908252 1908259 GCTAGAAT 1908264 5.25 high homology 0.000642592 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagtGCTAGAATcataCccctg 1913655 1914152 R yebR yebRp5 Sigma38 0 1914391 1914398 GCTAAACA 1914386 4.06 good homology 0.002967605 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcagGCTAAACAgcatGtcaca 1914282 1915565 F yebS yebSp3 Sigma38 0 1914185 1914192 GCCAGCCT 1914198 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatctGCCAGCCTattaaAataag 1918247 1919686 F rsmF rsmFp2 Sigma38 0 1918206 1918213 GCTAAACT 1918218 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttatGCTAAACTgcgcGcctgt 1919804 1920040 F yebV yebVp3 Sigma38 0 1919771 1919778 ACCACAAT 1919784 2.97 poor homology 0.008915179 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcgtACCACAATcggcaGctaaa 1919804 1920040 F yebV yebVp4 Sigma38 0 1919736 1919743 ACTAGGCT 1919749 3.13 poor homology 0.007828378 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctcaACTAGGCTgaaaaAtggtg 1920145 1920336 F yebW yebWp2 Sigma38 0 1919997 1920004 GTTACGAT 1920010 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacccGTTACGATcaacaAtctga 1920145 1920336 F yebW yebWp4 Sigma38 0 1920126 1920133 ACCACACT 1920139 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acggcACCACACTtcgggGatgaa 1920145 1920336 F yebW yebWp5 Sigma38 0 1920106 1920113 CCTAAACT 1920119 4.2 good homology 0.002334401 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctctCCTAAACTtaacgGtacgg 1921389 1921730 R yebY yebYp1 Sigma38 0 1921756 1921763 GCGACTCT 1921751 2.67 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcttGCGACTCTcgaaCctttt 1921389 1921730 R yebY yebYp2 Sigma38 0 1921918 1921925 GCCATCCT 1921913 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaaaGCCATCCTggtgAtgatt 1921389 1921730 R yebY yebYp3 Sigma38 0 1921960 1921967 CCCACGCT 1921955 3.01 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcccCCCACGCTtacgActtac 1921389 1921730 R yebY yebYp6 Sigma38 0 1921810 1921817 ACTAAACT 1921804 3.88 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggatgACTAAACTcgaatGggcga 1923132 1923362 F holE holEp1 Sigma38 0 1923077 1923084 GCCATCCT 1923090 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcttGCCATCCTggctcActctt 1923132 1923362 F holE holEp3 Sigma38 0 1922989 1922996 GCCATATT 1923001 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgaaGCCATATTatctAttcct 1923464 1924120 F yobB yobBp1 Sigma38 0 1923348 1923355 CCCAAACT 1923361 2.5 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgagCCCAAACTtaaatAaaact 1923464 1924120 F yobB yobBp6 Sigma38 0 1923375 1923382 GTTACACT 1923388 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acagaGTTACACTttcttAcataa 1923464 1924120 F yobB yobBp7 Sigma38 0 1923399 1923406 GCTAAATT 1923411 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcctGCTAAATTatgaGtattt 1923464 1924120 F yobB yobBp8 Sigma38 0 1923220 1923227 GCTACAAT 1923233 6.51 high homology 6.13E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaacGCTACAATatgccGgtgat 1928905 1930083 F purT purTp2 Sigma38 0 1928717 1928724 ACGACATT 1928730 2.68 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtaaACGACATTttctcTtcgcc 1937246 1938217 R lpxM lpxMp2 Sigma38 0 1938345 1938352 GCTACGGT 1938338 2.55 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgcaGCTACGGTttgattAattaa 1937246 1938217 R lpxM lpxMp4 Sigma38 0 1938259 1938266 GCTACACT 1938252 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgccGCTACACTatcaccAgattg 1938337 1939659 R yebA yebAp3 Sigma38 0 1939849 1939856 CCTGCGTT 1939842 3.83 good homology 0.003735028 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcaaCCTGCGTTtttgctGagcca 1942370 1943380 R ruvB ruvBp2 Sigma38 0 1943482 1943489 GCTATAAA 1943476 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctggGCTATAAAccacaAgaagc 1948856 1949422 F yecD yecDp3 Sigma38 0 1948645 1948652 GCTATTAT 1948658 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggcgGCTATTATactggAaattc 1948856 1949422 F yecD yecDp5 Sigma38 0 1948748 1948755 GCTATAAA 1948762 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtttGCTATAAAggtgttGcccga 1950290 1950685 F yecN yecNp2 Sigma38 0 1950123 1950130 GCCAGACA 1950137 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catacGCCAGACAttgcccAggcac 1950290 1950685 F yecN yecNp4 Sigma38 0 1950154 1950161 CATACCCT 1950167 3.1 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggtaCATACCCTgtgggAagact 1952602 1955031 R torZ torZp2 Sigma38 0 1955222 1955229 GATACCTA 1955217 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgacGATACCTAttgcGctggt 1952602 1955031 R torZ torZp4 Sigma38 0 1955242 1955249 AATACGCT 1955236 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atggcAATACGCTgaaaaActtga 1957304 1957870 R yecM yecMp1 Sigma38 0 1958070 1958077 CTTACATT 1958064 2.49 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatacCTTACATTgatgaAgcgag 1958086 1959819 F argS argSp1 Sigma38 0 1957903 1957910 TTTACCCT 1957915 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttaaTTTACCCTgttgCcctgt 1958086 1959819 F argS argSp2 Sigma38 0 1957866 1957873 GCCATAAT 1957879 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agttcGCCATAATcactcTtcgtc 1958086 1959819 F argS argSp3 Sigma38 0 1957850 1957857 GATAGATT 1957862 3.95 good homology 0.003312673 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgtcGATAGATTgccaGttcgc 1959996 1960484 F yecT yecTp2 Sigma38 0 1959784 1959791 GATACGCT 1959796 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtctgGATACGCTgggtAttgag 1960604 1960996 R flhE flhEp2 Sigma38 0 1961106 1961113 GCGACCAT 1961101 3.13 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgctGCGACCATtattGtctcg 1960604 1960996 R flhE flhEp5 Sigma38 0 1961009 1961016 GCGACAAT 1961003 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgacgGCGACAATtggcgGcaaat 1964417 1965061 R cheZ cheZp2 Sigma38 0 1965115 1965122 GCGACGCT 1965109 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgccGCGACGCTggaggAaaaac 1970860 1971363 R cheW cheWp4 Sigma38 0 1971475 1971482 GCGACCAT 1971469 3.13 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgctGCGACCATtcttgGcgacg 1976542 1977045 R insB insBp1 Sigma38 0 1977278 1977285 GCCAACTT 1977273 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgctGCCAACTTactgAtttag 1980578 1981564 R araH araHp4 Sigma38 0 1981787 1981794 GCTAAGCA 1981782 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttggcGCTAAGCAcgaaAtatat 1980578 1981564 R araH araHp6 Sigma38 0 1981588 1981595 GCCAGGCT 1981583 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtcaGCCAGGCTgttgCctgag 1985531 1985782 R yecJ yecJp2 Sigma38 0 1985815 1985822 GCTACTAT 1985810 4.18 good homology 0.002454088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtcGCTACTATaacgGctttc 1987275 1987514 R yecH yecHp1 Sigma38 0 1987735 1987742 GCCACGAT 1987730 3.74 good homology 0.004127844 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcccGCCACGATaaaaAcactt 1987275 1987514 R yecH yecHp4 Sigma38 0 1987532 1987539 GCTAGGCT 1987525 4.98 high homology 0.000902809 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctacGCTAGGCTttttttGaggag 1987275 1987514 R yecH yecHp6 Sigma38 0 1987537 1987544 GCTACGCT 1987531 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caatcGCTACGCTaggctTttttt 1994134 1994856 R sdiA sdiAp5 Sigma38 0 1994935 1994942 TATAAATT 1994930 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aataaTATAAATTatatAtaaat 1994134 1994856 R sdiA sdiAp10 Sigma38 0 1995088 1995095 GCTGCAAT 1995082 6.1 high homology 0.000125903 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttctGCTGCAATaataaGaaaaa 1995086 1995838 R yecC yecCp1 Sigma38 0 1995887 1995894 TCGACGTT 1995881 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttaTCGACGTTgcagaAccatt 1995086 1995838 R yecC yecCp4 Sigma38 0 1996007 1996014 GCGACAAT 1996002 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggccGCGACAATccagGtgccg 2005701 2006114 R yedD yedDp6 Sigma38 0 2006143 2006150 GCCACAAT 2006137 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaatGCCACAATcctctTttctt 2006301 2007506 F yedE yedEp2 Sigma38 0 2006259 2006266 GCGACTCT 2006273 2.67 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattcGCGACTCTtgtttcAaacct 2006301 2007506 F yedE yedEp4 Sigma38 0 2006168 2006175 GCCAGCCT 2006181 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgtcGCCAGCCTttcaaGgttca 2007845 2008513 F yedK yedKp2 Sigma38 0 2007773 2007780 GTTACCTT 2007787 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acatcGTTACCTTtgtatcAcatag 2022659 2022847 R dsrB dsrBp2 Sigma38 0 2023055 2023062 TCGACGCT 2023048 3.09 poor homology 0.008066787 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgacaTCGACGCTgacctcAcgttt 2022659 2022847 R dsrB dsrBp5 Sigma38 0 2022873 2022880 TCTACACT 2022867 6.48 high homology 8.03E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgtTCTACACTggcacAaagcc 2023010 2023237 F yodD yodDp1 Sigma38 0 2022764 2022771 ACTAAACT 2022777 3.88 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccttcACTAAACTcctcaActgcc 2023010 2023237 F yodD yodDp2 Sigma38 0 2022937 2022944 TCTATACT 2022950 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacggTCTATACTtaagaGatgcc 2023535 2024350 F yedP yedPp3 Sigma38 0 2023399 2023406 GCTACTTA 2023412 2.85 poor homology 0.010254896 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaacGCTACTTAtgaatAgaaat 2026212 2026394 R yodC yodCp2 Sigma38 0 2026437 2026444 GCCATCTT 2026431 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattcGCCATCTTcaactAaggtg 2026212 2026394 R yodC yodCp3 Sigma38 0 2026454 2026461 GCTATTAT 2026448 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cactgGCTATTATgcaaaAttcgc 2026473 2027390 R yedI yedIp1 Sigma38 0 2027490 2027497 GATATAAT 2027485 3.31 poor homology 0.006670903 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgagaGATATAATtgcaCttgat 2027563 2028483 F yedA yedAp4 Sigma38 0 2027453 2027460 GCTTCACA 2027466 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacttGCTTCACAggtcaAcattt 2028472 2028942 R vsr vsrp1 Sigma38 0 2029080 2029087 GCGAAATT 2029075 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagaaGCGAAATTccgtAttccg 2030408 2031103 R yedJ yedJp2 Sigma38 0 2031121 2031128 GCGACTCT 2031115 2.67 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggtgGCGACTCTttggcAacgga 2034818 2036176 R yedV yedVp1 Sigma38 0 2036405 2036412 ATTACACT 2036399 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagtATTACACTgacgcGcaagg 2034818 2036176 R yedV yedVp3 Sigma38 0 2036350 2036357 GCGAAATT 2036343 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agctgGCGAAATTatacccAgaacg 2034818 2036176 R yedV yedVp5 Sigma38 0 2036216 2036223 GCCACAAT 2036210 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taattGCCACAATccgggGgatgg 2036980 2037393 F hiuH hiuHp4 Sigma38 0 2036921 2036928 GTTACCCT 2036933 3.42 poor homology 0.005572007 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaagGTTACCCTggacGctttt 2036980 2037393 F hiuH hiuHp7 Sigma38 0 2036941 2036948 GCTATCCT 2036953 4.66 high homology 0.00137404 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcGCTATCCTcaaaActcat 2040392 2040922 F yodB yodBp4 Sigma38 0 2040216 2040223 CATACACA 2040229 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattcCATACACAatacgGccaac 2040392 2040922 F yodB yodBp8 Sigma38 0 2040356 2040363 GATAGCTT 2040368 2.89 poor homology 0.009852796 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtggGATAGCTTgactGtgaaa 2040392 2040922 F yodB yodBp9 Sigma38 0 2040144 2040151 GACACGCT 2040156 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctacaGACACGCTcatcActatg 2040392 2040922 F yodB yodBp11 Sigma38 0 2040277 2040284 GTTACAAT 2040289 3.69 good homology 0.004383096 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggctgGTTACAATatgcActatc 2041675 2042472 F mtfA mtfAp2 Sigma38 0 2041430 2041437 TCTACGAT 2041444 4.61 high homology 0.001473669 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatatTCTACGATtgttctGtttag 2042962 2050038 F yeeJ yeeJp2 Sigma38 0 2042743 2042750 TCGACCTT 2042755 2.62 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcccTCGACCTTtatgGttgag 2042962 2050038 F yeeJ yeeJp5 Sigma38 0 2042899 2042906 TTTACATT 2042912 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagtaTTTACATTttttcGctgtg 2042962 2050038 F yeeJ yeeJp7 Sigma38 0 2042917 2042924 GCTAGAAA 2042929 3.59 good homology 0.005092431 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctgtGCTAGAAAgggcGcattt 2051667 2052983 F shiA shiAp4 Sigma38 0 2051618 2051625 GTTACCTT 2051630 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtgaGTTACCTTttccAtacta 2051667 2052983 F shiA shiAp6 Sigma38 0 2051627 2051634 TCCATACT 2051639 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctttTCCATACTaattAtaaaa 2051667 2052983 F shiA shiAp8 Sigma38 0 2051450 2051457 TCTAACCT 2051462 3.83 good homology 0.003697864 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatcTCTAACCTgtggGtcctc 2051667 2052983 F shiA shiAp9 Sigma38 0 2051561 2051568 GATGCGCT 2051574 4.2 good homology 0.002334401 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgcaGATGCGCTctgtcGaggta 2051667 2052983 F shiA shiAp10 Sigma38 0 2051497 2051504 CCTGCGCT 2051509 4.3 good homology 0.002154924 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caactCCTGCGCTttcaTcttcc 2054882 2055598 F yeeN yeeNp1 Sigma38 0 2054669 2054676 TCCACATA 2054682 2.64 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgattTCCACATAttaaaAgcaag 2054882 2055598 F yeeN yeeNp3 Sigma38 0 2054808 2054815 GATATAAT 2054821 3.31 poor homology 0.006670903 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttatGATATAATatgctGaatta 2056051 2056126 R asnW asnWp4 Sigma38 0 2056145 2056152 GCTAATAT 2056138 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcatcGCTAATATtcgcctCgttct 2056051 2056126 R asnW asnWp5 Sigma38 0 2056275 2056282 AATACCCT 2056268 2.78 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atggaAATACCCTcgacccGagccg 2056227 2057714 R yeeO yeeOp5 Sigma38 0 2057751 2057758 GCGAAAAT 2057746 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttgGCGAAAATctttGcagct 2060415 2061347 R erfK erfKp2 Sigma38 0 2061361 2061368 GCGACATA 2061355 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttcGCGACATAggaaaGggaca 2060415 2061347 R erfK erfKp3 Sigma38 0 2061371 2061378 GATAGCTT 2061365 2.89 poor homology 0.009852796 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taacgGATAGCTTtcgcgAcatag 2060415 2061347 R erfK erfKp5 Sigma38 0 2061384 2061391 GCTATACT 2061378 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaaaGCTATACTtaacgGatagc 2061412 2062491 R cobT cobTp1 Sigma38 0 2062706 2062713 GCGACAAA 2062700 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatggGCGACAAAcctgcGtcaca 2061412 2062491 R cobT cobTp3 Sigma38 0 2062693 2062700 GTCACACT 2062686 2.78 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgcGTCACACTcggcttAgccgc 2061412 2062491 R cobT cobTp5 Sigma38 0 2062675 2062682 GCTATTTT 2062670 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagccGCTATTTTtgctGccgta 2061412 2062491 R cobT cobTp7 Sigma38 0 2062502 2062509 GCTATAAA 2062496 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcactGCTATAAAgagacGtgaga 2061412 2062491 R cobT cobTp9 Sigma38 0 2062555 2062562 GATACGCT 2062550 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgggcGATACGCTgggaGcagcc 2064329 2065345 R insH insHp1 Sigma38 0 2065390 2065397 GCGAAATT 2065384 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agagaGCGAAATTgtggtGttcta 2072803 2074335 F yeeR yeeRp2 Sigma38 0 2072753 2072760 GCCACATT 2072766 5.13 high homology 0.000746586 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaacGCCACATTcgctgGcatta 2072803 2074335 F yeeR yeeRp3 Sigma38 0 2072659 2072666 GCCACACT 2072671 5.6 high homology 0.000349153 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcagGCCACACTgaatGtgacc 2077557 2078615 R yeeA yeeAp2 Sigma38 0 2078708 2078715 ATTACACT 2078701 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggaaATTACACTgttcccGgtttg 2079405 2080571 R dacD dacDp4 Sigma38 0 2080705 2080712 GCCACAAT 2080699 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttagcGCCACAATttggcAgcgag 2085353 2086282 R yeeY yeeYp2 Sigma38 0 2086520 2086527 TCTATAAT 2086515 4.1 good homology 0.002822873 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acacaTCTATAATatatGtgcgc 2086328 2087152 R yeeZ yeeZp6 Sigma38 0 2087194 2087201 GATACGCT 2087188 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttttGATACGCTagcgtAgcctt 2087235 2087489 R yoeB yoeBp3 Sigma38 0 2087526 2087533 GATAGCCT 2087519 3.36 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caatcGATAGCCTgaaatcAggcaa 2095345 2096325 R cld cldp8 Sigma38 0 2096362 2096369 GCTAAACT 2096356 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcGCTAAACTatgcgGacttg 2096471 2097637 R ugd ugdp4 Sigma38 0 2097677 2097684 GCTAAAAA 2097672 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggatGCTAAAAAcatcAtgatt 2096471 2097637 R ugd ugdp5 Sigma38 0 2097765 2097772 GCTATTCT 2097759 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcaGCTATTCTtataaAgaaaa 2096471 2097637 R ugd ugdp6 Sigma38 0 2097804 2097811 ACTAAATT 2097798 3.41 poor homology 0.0057417 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatagACTAAATTtcactGcttaa 2096471 2097637 R ugd ugdp8 Sigma38 0 2097809 2097816 TATAGACT 2097802 3.6 good homology 0.004991594 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatctTATAGACTaaatttCactgc 2101415 2102533 R wbbK wbbKp1 Sigma38 0 2102548 2102555 AATACAAT 2102542 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagaAATACAATcatgaGaccaa 2104084 2105250 R rfc rfcp5 Sigma38 0 2105421 2105428 CCTACTAT 2105414 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaacCCTACTATccagttAatgat 2106361 2107608 R rfbX rfbXp3 Sigma38 0 2107756 2107763 ACTACAAA 2107750 3.01 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataaaACTACAAActattAtcatc 2112526 2113920 R wcaM wcaMp3 Sigma38 0 2113947 2113954 GCCAGCTT 2113941 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aactcGCCAGCTTgctgcAggctt 2112526 2113920 R wcaM wcaMp4 Sigma38 0 2114148 2114155 TCTACTCT 2114142 4.15 good homology 0.002605841 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggttTCTACTCTgcataGtggaa 2116704 2118182 R wzxC wzxCp2 Sigma38 0 2118274 2118281 TCGACCTT 2118269 2.62 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgagtTCGACCTTgagtAcatcc 2116704 2118182 R wzxC wzxCp3 Sigma38 0 2118382 2118389 GCTACATG 2118377 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaagGCTACATGctgcGccata 2116704 2118182 R wzxC wzxCp4 Sigma38 0 2118308 2118315 GACACGCT 2118302 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaccGACACGCTggagaAaatgg 2130091 2130579 R wcaB wcaBp1 Sigma38 0 2130682 2130689 TTTACCCT 2130676 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agctgTTTACCCTctaccAgatcc 2137783 2139636 R asmA asmAp2 Sigma38 0 2139729 2139736 GCGACCTT 2139722 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcggtGCGACCTTacaaccGccgtg 2145698 2147050 F yegD yegDp1 Sigma38 0 2145646 2145653 GCAACATT 2145659 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgacgGCAACATTtcgctAaagtc 2145698 2147050 F yegD yegDp3 Sigma38 0 2145482 2145489 TCCACACT 2145494 4.77 high homology 0.001268399 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgttTCCACACTgctcAccgca 2147063 2149009 R yegI yegIp2 Sigma38 0 2149195 2149202 TCCAGAAT 2149188 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcTCCAGAATccctttGtagtc 2147063 2149009 R yegI yegIp6 Sigma38 0 2149116 2149123 GATAAAAT 2149109 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcctGATAAAATtgcattAtcatt 2149209 2149670 F yegJ yegJp3 Sigma38 0 2149184 2149191 ACTACAAA 2149196 3.01 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttgACTACAAAgggaTtctgg 2149209 2149670 F yegJ yegJp6 Sigma38 0 2149174 2149181 GCTAACTT 2149187 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCTAACTTtgactAcaaag 2149209 2149670 F yegJ yegJp9 Sigma38 0 2149126 2149133 GATACAAT 2149138 4.89 high homology 0.001091721 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcagGATACAATtcaaTttcgg 2163213 2163545 F yegP yegPp2 Sigma38 0 2163073 2163080 GCAACATT 2163086 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atccgGCAACATTatcccAcgcat 2163213 2163545 F yegP yegPp4 Sigma38 0 2163185 2163192 GATACACA 2163198 4.02 good homology 0.003027555 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcGATACACAatttcAatcaa 2163213 2163545 F yegP yegPp5 Sigma38 0 2163028 2163035 GCGACATT 2163041 4.52 high homology 0.001612451 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttaGCGACATTattttGttagc 2163692 2165053 F yegQ yegQp2 Sigma38 0 2163603 2163610 GCTACAAT 2163615 6.51 high homology 6.13E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acagcGCTACAATgcccGccctt 2165326 2165544 R ogrK ogrKp3 Sigma38 0 2165579 2165586 ACTAAAAT 2165572 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattaACTAAAATggcaccAtcaac 2165326 2165544 R ogrK ogrKp4 Sigma38 0 2165712 2165719 GACACATT 2165706 3.51 good homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaggtGACACATTttctgAataat 2166736 2167635 F yegS yegSp2 Sigma38 0 2166627 2166634 TCCATACT 2166641 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatccTCCATACTtgaactGacttt 2166736 2167635 F yegS yegSp4 Sigma38 0 2166676 2166683 TCCACCTT 2166689 3.24 poor homology 0.007154598 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgacTCCACCTTttgttTtctgc 2166736 2167635 F yegS yegSp8 Sigma38 0 2166695 2166702 TCTACACT 2166707 6.48 high homology 8.03E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgcTCTACACTatctAcagac 2180855 2181673 R yegX yegXp4 Sigma38 0 2181790 2181797 GACACGCT 2181785 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggccGACACGCTggaaGttggt 2181738 2182538 R thiD thiDp4 Sigma38 0 2182579 2182586 TCCACATT 2182573 4.3 good homology 0.002154924 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgtTCCACATTtccttGatgcg 2181738 2182538 R thiD thiDp5 Sigma38 0 2182671 2182678 GATACGCT 2182665 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggcGATACGCTggaaaAtgtcg 2184982 2185320 F yohN yohNp5 Sigma38 0 2184870 2184877 TTTACACT 2184882 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttcaTTTACACTttttAcgaaa 2190537 2190818 R yehE yehEp5 Sigma38 0 2191030 2191037 GTTACATT 2191024 4.01 good homology 0.003119758 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagatGTTACATTgatgcGgtgta 2190537 2190818 R yehE yehEp6 Sigma38 0 2190943 2190950 TCTACAAA 2190938 4.02 good homology 0.003088715 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaacTCTACAAAgtcgAttgat 2191081 2192190 R mrp mrpp4 Sigma38 0 2192205 2192212 TCTATACA 2192199 3.24 poor homology 0.007154598 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttaTCTATACAaaaaaGgagtc 2191081 2192190 R mrp mrpp5 Sigma38 0 2192242 2192249 TCTATATT 2192236 4.42 high homology 0.001892229 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttcTCTATATTcttcaGgtaaa 2201994 2202311 F yehK yehKp2 Sigma38 0 2201794 2201801 ACTACAAT 2201806 4.67 high homology 0.001360368 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaccACTACAATgttgAtagca 2202618 2203706 F yehL yehLp2 Sigma38 0 2202596 2202603 AATACATT 2202609 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcattAATACATTtcaggGatgaa 2210265 2210984 R yehT yehTp3 Sigma38 0 2211169 2211176 GCAACATT 2211164 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagggGCAACATTtgatGctgga 2210265 2210984 R yehT yehTp5 Sigma38 0 2210998 2211005 ACTACCAT 2210992 3.61 good homology 0.004941927 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttacgACTACCATggaggGacgag 2212888 2213619 F mlrA mlrAp4 Sigma38 0 2212804 2212811 GATGCACA 2212816 3.61 good homology 0.00484407 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctataGATGCACAaaaaAcgggc 2212888 2213619 F mlrA mlrAp5 Sigma38 0 2212701 2212708 CATACATT 2212713 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtaaCATACATTgcctGcgttt 2212888 2213619 F mlrA mlrAp7 Sigma38 0 2212675 2212682 ACCACACT 2212689 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcaaACCACACTtcccttTaaaac 2212888 2213619 F mlrA mlrAp8 Sigma38 0 2212710 2212717 CCTGCGTT 2212723 3.83 good homology 0.003735028 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattgCCTGCGTTtaactTtcttt 2213767 2214498 R yehW yehWp1 Sigma38 0 2214545 2214552 GCCAGCCT 2214540 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaggGCCAGCCTtgcgGcacgc 2220207 2221922 F dld dldp1 Sigma38 0 2220046 2220053 GCGAAAAT 2220059 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcaGCGAAAATggtgcAaaaac 2220207 2221922 F dld dldp5 Sigma38 0 2220161 2220168 GCTATTCT 2220174 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaggcGCTATTCTagtttGtgata 2220207 2221922 F dld dldp8 Sigma38 0 2219971 2219978 GCCAGACT 2219983 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaggGCCAGACTcaccGcgatt 2221960 2222892 R pbpG pbpGp1 Sigma38 0 2223081 2223088 GCTACGGT 2223076 2.55 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgggGCTACGGTtatcGtttgt 2221960 2222892 R pbpG pbpGp3 Sigma38 0 2223063 2223070 TCTAGAAA 2223056 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgtTCTAGAAAgttcttTgacgt 2221960 2222892 R pbpG pbpGp4 Sigma38 0 2223094 2223101 GTTATACT 2223088 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaccGTTATACTatgggGctacg 2221960 2222892 R pbpG pbpGp6 Sigma38 0 2222956 2222963 GCTAGCCT 2222950 4.98 high homology 0.000867409 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgtcGCTAGCCTcagtaAatcct 2223066 2223653 R yohC yohCp2 Sigma38 0 2223877 2223884 GCCAGGCT 2223872 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttccGCCAGGCTaccgAtcacc 2224531 2225292 R yohF yohFp3 Sigma38 0 2225448 2225455 GCCAGAAT 2225443 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgaaGCCAGAATccccGcgctg 2224531 2225292 R yohF yohFp4 Sigma38 0 2225325 2225332 TCTATACT 2225320 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcctTCTATACTtaacGtttat 2227460 2228407 R dusC dusCp1 Sigma38 0 2228609 2228616 CATACAAT 2228602 3.37 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcatCATACAATtaattcGtaaaa 2227460 2228407 R dusC dusCp2 Sigma38 0 2228436 2228443 GCTAACAT 2228431 3.86 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taggcGCTAACATagcgCctcat 2228646 2229044 F yohJ yohJp2 Sigma38 0 2228503 2228510 TCTATGCT 2228515 3.82 good homology 0.003772566 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccctcTCTATGCTtgatGtatgc 2228646 2229044 F yohJ yohJp3 Sigma38 0 2228433 2228440 GCTATGTT 2228445 4.18 good homology 0.002478752 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaggcGCTATGTTagcgCctatg 2234765 2235775 R mglC mglCp7 Sigma38 0 2235840 2235847 GATACAAA 2235835 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtcGATACAAAaacaAcaacg 2239832 2240989 R yeiB yeiBp1 Sigma38 0 2241182 2241189 GCTACAAA 2241177 4.85 high homology 0.001136275 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgcGCTACAAAcgctGctggg 2241932 2242768 F yeiG yeiGp4 Sigma38 0 2241789 2241796 GCGATAAT 2241801 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcacaGCGATAATtattGtaatt 2246759 2247640 R yeiE yeiEp2 Sigma38 0 2247672 2247679 TATATATT 2247667 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgatTATATATTtataAttaat 2247739 2248788 F yeiH yeiHp1 Sigma38 0 2247558 2247565 GCCAGCAT 2247571 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaacGCCAGCATcaccgAcgcct 2247739 2248788 F yeiH yeiHp3 Sigma38 0 2247503 2247510 GCCAAGCT 2247516 2.95 poor homology 0.009186686 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcacGCCAAGCTgccctTccagg 2250917 2252167 R nupX nupXp1 Sigma38 0 2252279 2252286 GCTACATC 2252274 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgcgGCTACATCaaaaCccatt 2254107 2255357 R psuT psuTp1 Sigma38 0 2255481 2255488 GCGAAATT 2255475 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgaGCGAAATTgccaaAgaata 2257741 2259432 R fruA fruAp2 Sigma38 0 2259483 2259490 GCCGCAAT 2259478 4.4 good homology 0.001989245 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agttgGCCGCAATgatgGcgcgc 2263063 2263317 R yeiW yeiWp2 Sigma38 0 2263428 2263435 GCGACAAA 2263421 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatcGCGACAAAgtactcGcgacg 2263063 2263317 R yeiW yeiWp3 Sigma38 0 2263497 2263504 CATACCTT 2263491 2.62 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtacCATACCTTttttaAtttcg 2263472 2264044 F yeiP yeiPp2 Sigma38 0 2263315 2263322 CATACGTT 2263328 2.62 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattcCATACGTTgttctCttaag 2263472 2264044 F yeiP yeiPp3 Sigma38 0 2263434 2263441 GCGATATT 2263446 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtcGCGATATTtttgAcattt 2264267 2265733 F yeiQ yeiQp4 Sigma38 0 2264222 2264229 TTTACACT 2264236 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataacTTTACACTgtcgttGttaat 2268748 2270304 F rtn rtnp4 Sigma38 0 2268593 2268600 GCTATCCT 2268606 4.66 high homology 0.00137404 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccttgGCTATCCTgacgaGttaac 2275915 2276259 R yejG yejGp7 Sigma38 0 2276364 2276371 GCCACGCA 2276358 2.87 poor homology 0.010051836 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagagGCCACGCAggcgaGgcatc 2276592 2277782 R bcr bcrp4 Sigma38 0 2277807 2277814 TCTAACTT 2277802 3.36 poor homology 0.006219909 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtcgTCTAACTTttcaAtgact 2277810 2278505 R rsuA rsuAp1 Sigma38 0 2278614 2278621 TATGCCAT 2278608 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatagTATGCCATggatcTttttc 2277810 2278505 R rsuA rsuAp4 Sigma38 0 2278573 2278580 GCTATACT 2278567 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaccGCTATACTgggcaGacaac 2280539 2280823 F rplY rplYp1 Sigma38 0 2280448 2280455 TATAGAAT 2280460 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgagTATAGAATctcgCccgct 2280962 2281969 R yejK yejKp1 Sigma38 0 2282030 2282037 GCCATCTT 2282024 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaccGCCATCTTttattGcgtcg 2280962 2281969 R yejK yejKp4 Sigma38 0 2282056 2282063 GTTACGCT 2282049 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttctcGTTACGCTgccttcTgtaaa 2282151 2282378 F yejL yejLp1 Sigma38 0 2282105 2282112 GCTACGGT 2282118 2.55 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgttGCTACGGTaatatGttgcc 2282151 2282378 F yejL yejLp2 Sigma38 0 2281928 2281935 GATAAGCT 2281941 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcttGATAAGCTggtgcAgagca 2282151 2282378 F yejL yejLp3 Sigma38 0 2281959 2281966 TCCAGACT 2281971 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgataTCCAGACTcatgAtaaac 2282151 2282378 F yejL yejLp5 Sigma38 0 2281970 2281977 GATAAACT 2281984 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcatGATAAACTctccttTaagac 2303130 2304776 R mqo mqop3 Sigma38 0 2304942 2304949 GCTAAAAA 2304935 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatatGCTAAAAAtcccttCatttc 2303130 2304776 R mqo mqop4 Sigma38 0 2304915 2304922 CCTATAAT 2304909 3.41 poor homology 0.005799405 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataacCCTATAATtaatcAacgaa 2303130 2304776 R mqo mqop7 Sigma38 0 2304885 2304892 TCTAAAAT 2304880 4.1 good homology 0.002851244 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgttTCTAAAATtagaAtataa 2308501 2309556 R apbE apbEp2 Sigma38 0 2309665 2309672 TCTAATCT 2309659 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccagtTCTAATCTcgattGatatc 2308501 2309556 R apbE apbEp4 Sigma38 0 2309758 2309765 ACTACAAA 2309753 3.01 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttgACTACAAAatcaAcctgc 2308501 2309556 R apbE apbEp5 Sigma38 0 2309798 2309805 GCTACCTA 2309791 4.11 good homology 0.0026852 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttggtGCTACCTActacttCaacaa 2308501 2309556 R apbE apbEp6 Sigma38 0 2309767 2309774 CCTACGTT 2309762 4.24 good homology 0.002242868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtccaCCTACGTTgactAcaaaa 2315049 2317898 R rcsC rcsCp3 Sigma38 0 2317931 2317938 ACCACACT 2317925 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccttaACCACACTccatcGgtcac 2315049 2317898 R rcsC rcsCp6 Sigma38 0 2317940 2317947 GCTACCTT 2317935 5.77 high homology 0.000218221 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaccGCTACCTTaaccAcactc 2318065 2319891 F atoS atoSp1 Sigma38 0 2317856 2317863 GCGAGGCT 2317869 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtagcGCGAGGCTttcagGgttgt 2325389 2326165 R yfaP yfaPp2 Sigma38 0 2326285 2326292 TTTACGCT 2326279 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttcTTTACGCTtcaggAtcggc 2325389 2326165 R yfaP yfaPp3 Sigma38 0 2326184 2326191 CCGACAAT 2326178 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgacCCGACAATtattaAtggac 2347957 2349033 R glpQ glpQp3 Sigma38 0 2349176 2349183 GCTACACC 2349171 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttgGCTACACCgtggActtct 2356064 2356867 R rhmA rhmAp1 Sigma38 0 2357078 2357085 GCGGGAAT 2357071 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctGCGGGAATtggtttTgtaaa 2356064 2356867 R rhmA rhmAp2 Sigma38 0 2356982 2356989 GCGGGATT 2356977 2.85 poor homology 0.010254896 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgcgGCGGGATTactgAcgctg 2361755 2362297 R yfaZ yfaZp2 Sigma38 0 2362400 2362407 GTTACAAT 2362394 3.69 good homology 0.004383096 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaGTTACAATaagtgActaga 2362576 2363001 F nudI nudIp2 Sigma38 0 2362457 2362464 GATACACA 2362470 4.02 good homology 0.003027555 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcGATACACAcaaaaAtaata 2363040 2363642 R ais aisp3 Sigma38 0 2363865 2363872 GCGAAATT 2363859 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttggaGCGAAATTttaagGataga 2363040 2363642 R ais aisp5 Sigma38 0 2363852 2363859 GATAGAAT 2363847 3.63 good homology 0.00484407 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaagGATAGAATattaActtaa 2363950 2365089 F arnB arnBp2 Sigma38 0 2363705 2363712 GCGATAAT 2363718 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttctgGCGATAATtcgcaGttggt 2363950 2365089 F arnB arnBp7 Sigma38 0 2363887 2363894 TATACACA 2363900 3.19 poor homology 0.007446583 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caaaaTATACACAacactCtttat 2363950 2365089 F arnB arnBp10 Sigma38 0 2363854 2363861 TCTATCCT 2363866 3.83 good homology 0.003697864 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatatTCTATCCTtaaaAtttcg 2363950 2365089 F arnB arnBp12 Sigma38 0 2363738 2363745 CCTACGAT 2363750 3.92 good homology 0.003447865 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatCCTACGATgtcgGcaaaa 2371294 2371560 R pmrD pmrDp2 Sigma38 0 2371782 2371789 GATAAGCT 2371776 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaaaGATAAGCTggcccGttttc 2371670 2373025 R menE menEp1 Sigma38 0 2373110 2373117 GACACGCT 2373103 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggctgGACACGCTggatctGatgca 2379104 2379565 R elaA elaAp1 Sigma38 0 2379593 2379600 GCTAGTAT 2379587 2.92 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttccgGCTAGTATaaggcAtacat 2379630 2380547 F rbn rbnp3 Sigma38 0 2379449 2379456 GATATCCT 2379462 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccatcGATATCCTgataaGggcaa 2380735 2381946 F elaD elaDp4 Sigma38 0 2380571 2380578 GCGAAACT 2380585 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaggGCGAAACTtgccctGttatc 2380735 2381946 F elaD elaDp5 Sigma38 0 2380664 2380671 ACTATATT 2380676 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacgcACTATATTcagaGcaata 2380735 2381946 F elaD elaDp7 Sigma38 0 2380600 2380607 GCTACATA 2380613 5.17 high homology 0.000724521 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccgcGCTACATAtatccAcccac 2383882 2384853 F yfbL yfbLp2 Sigma38 0 2383785 2383792 TATACTCT 2383797 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaaaTATACTCTttgtAtaatc 2383882 2384853 F yfbL yfbLp4 Sigma38 0 2383819 2383826 AATACAAT 2383832 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aataaAATACAATatcgaAaccca 2383882 2384853 F yfbL yfbLp6 Sigma38 0 2383805 2383812 GCTAATCT 2383818 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcctGCTAATCTtaataAaatac 2384956 2385459 F yfbM yfbMp3 Sigma38 0 2384716 2384723 GCCATAAT 2384728 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcccGCCATAATgattActgac 2387135 2387986 F yfbP yfbPp4 Sigma38 0 2386896 2386903 CCCAGACT 2386909 2.82 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgaCCCAGACTggcccTttagt 2388070 2389527 R nuoN nuoNp2 Sigma38 0 2389708 2389715 GCCAGATT 2389703 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaaaGCCAGATTgccaGccagg 2405583 2406800 F alaA alaAp1 Sigma38 0 2405355 2405362 ACCAGACT 2405367 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaACCAGACTtacaAttaag 2405583 2406800 F alaA alaAp6 Sigma38 0 2405527 2405534 TCTAAGCT 2405541 3.82 good homology 0.003772566 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgtTCTAAGCTgacttcCacggc 2406884 2407483 F yfbR yfbRp6 Sigma38 0 2406844 2406851 GCCACAAT 2406857 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcccGCCACAATgacctGatgat 2417863 2418507 R yfcF yfcFp1 Sigma38 0 2418716 2418723 GCGATAAT 2418711 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcaaGCGATAATccagCtctgc 2417863 2418507 R yfcF yfcFp7 Sigma38 0 2418730 2418737 TCTACCTT 2418724 4.94 high homology 0.000921047 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaggTCTACCTTaatcaAgcgat 2418643 2419290 F yfcG yfcGp4 Sigma38 0 2418434 2418441 GCCACCCA 2418447 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaacGCCACCCAggcggAtaaca 2418643 2419290 F yfcG yfcGp5 Sigma38 0 2418600 2418607 TCTATACT 2418612 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcttTCTATACTtgtgGtgttc 2420671 2421561 R yfcI yfcIp5 Sigma38 0 2421664 2421671 GCTAAAAA 2421657 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtccGCTAAAAAtacttcTgaatt 2421758 2422531 R hisP hisPp1 Sigma38 0 2422680 2422687 GCGATATT 2422673 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcccGCGATATTaacgccGccacg 2432104 2432763 R dedA dedAp1 Sigma38 0 2432987 2432994 GCTGGATA 2432981 3.5 poor homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggagaGCTGGATAgcagaGttgct 2439786 2441792 F mnmC mnmCp2 Sigma38 0 2439747 2439754 GCTAAGAT 2439761 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acatcGCTAAGATcgagccAccgcc 2441913 2442191 R yfcL yfcLp1 Sigma38 0 2442203 2442210 TTTACAAT 2442197 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacgtTTTACAATgaggaAagaag 2441913 2442191 R yfcL yfcLp2 Sigma38 0 2442287 2442294 ACTACAAA 2442280 3.01 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagcACTACAAAattattAtcaca 2441913 2442191 R yfcL yfcLp3 Sigma38 0 2442210 2442217 GCCACGTT 2442204 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccagcGCCACGTTttacaAtgagg 2441913 2442191 R yfcL yfcLp4 Sigma38 0 2442408 2442415 GCGACAAT 2442402 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagttGCGACAATctggaAgggga 2446628 2447179 F yfcN yfcNp5 Sigma38 0 2446499 2446506 GCTAGTTT 2446512 3.25 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggcgGCTAGTTTgccatGaagat 2447250 2448071 R yfcO yfcOp1 Sigma38 0 2448183 2448190 GCTAACCA 2448177 3 poor homology 0.008651695 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgcGCTAACCAatggcAataac 2447250 2448071 R yfcO yfcOp2 Sigma38 0 2448194 2448201 GCGACCTT 2448187 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgggGCGACCTTtgcgctAaccaa 2447250 2448071 R yfcO yfcOp3 Sigma38 0 2448086 2448093 GCGACATT 2448080 4.52 high homology 0.001612451 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taactGCGACATTtgagtAtattt 2453105 2453668 R yfcV yfcVp5 Sigma38 0 2453792 2453799 AATACATT 2453787 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caacgAATACATTttttAcgacc 2453105 2453668 R yfcV yfcVp10 Sigma38 0 2453866 2453873 TCTACATT 2453860 6 high homology 0.000178665 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaTCTACATTtactcAttagt 2461034 2462092 F yfdF yfdFp1 Sigma38 0 2460951 2460958 TCTAAATA 2460964 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taggtTCTAAATAaatgaGcgttt 2461034 2462092 F yfdF yfdFp2 Sigma38 0 2460995 2461002 TATATATT 2461007 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtaaTATATATTtgtaAcaaat 2461034 2462092 F yfdF yfdFp3 Sigma38 0 2460944 2460951 GATAGGTT 2460956 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaGATAGGTTctaaAtaaat 2461034 2462092 F yfdF yfdFp6 Sigma38 0 2460927 2460934 CATACACT 2460941 4.16 good homology 0.002554241 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgctCATACACTcaaattAaagat 2463323 2464255 F yfdC yfdCp1 Sigma38 0 2463237 2463244 TCTACATT 2463250 6 high homology 0.000178665 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctttTCTACATTttcagAgtaac 2463323 2464255 F yfdC yfdCp2 Sigma38 0 2463282 2463289 GCTACGCT 2463296 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagccGCTACGCTttagctAtacgt 2464567 2465724 F intS intSp3 Sigma38 0 2464534 2464541 GATAAAAT 2464548 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtgGATAAAATaattttAcccac 2465877 2466239 F gtrA gtrAp3 Sigma38 0 2465843 2465850 ACTTCATT 2465856 2.66 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatagACTTCATTcctttGattat 2465877 2466239 F gtrA gtrAp5 Sigma38 0 2465725 2465732 GCGACCTT 2465737 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtgaGCGACCTTaacaActatc 2465877 2466239 F gtrA gtrAp7 Sigma38 0 2465838 2465845 GATAGACT 2465851 4.43 high homology 0.00185476 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggatGATAGACTtcattCctttg 2465877 2466239 F gtrA gtrAp8 Sigma38 0 2465682 2465689 GATGCAAT 2465695 4.48 high homology 0.001799944 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaatGATGCAATggtggGcggac 2469099 2469539 R yfdK yfdKp3 Sigma38 0 2469686 2469693 ATTACACT 2469681 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggATTACACTcccgGcagtg 2469099 2469539 R yfdK yfdKp7 Sigma38 0 2469659 2469666 GCTATATA 2469654 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttgGCTATATAgcttGtgccg 2471626 2471988 F yfdP yfdPp7 Sigma38 0 2471434 2471441 GCCAGATT 2471447 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccccGCCAGATTctgacGggtga 2471626 2471988 F yfdP yfdPp8 Sigma38 0 2471467 2471474 GCCAGATT 2471480 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCCAGATTtcgacGcatca 2473006 2473542 F yfdR yfdRp1 Sigma38 0 2472964 2472971 CCCAAACT 2472976 2.5 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttaCCCAAACTcagcGcggtg 2474332 2474532 F torI torIp2 Sigma38 0 2474257 2474264 TCTACCAT 2474269 4.62 high homology 0.001444488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgaTCTACCATcgccGtcata 2478660 2480198 R emrY emrYp3 Sigma38 0 2480222 2480229 GCAACATT 2480216 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattaGCAACATTatttcGcataa 2487264 2488208 R yfdV yfdVp3 Sigma38 0 2488341 2488348 TCGACCCT 2488335 3.1 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtcaTCGACCCTgcagcAggaac 2487264 2488208 R yfdV yfdVp4 Sigma38 0 2488314 2488321 GCCATATT 2488308 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtgGCCATATTaccaaActtaa 2488278 2489972 R oxc oxcp8 Sigma38 0 2490062 2490069 GCGACGAT 2490055 3.12 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttataGCGACGATgaaattGctgca 2496693 2498390 F ypdA ypdAp5 Sigma38 0 2496455 2496462 TCTGCTTT 2496467 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggaacTCTGCTTTaaaaAcagga 2496693 2498390 F ypdA ypdAp8 Sigma38 0 2496562 2496569 GATGCATT 2496574 4.8 high homology 0.001255778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caagaGATGCATTgctaAtacac 2496693 2498390 F ypdA ypdAp9 Sigma38 0 2496479 2496486 TCTGCGCT 2496492 4.99 high homology 0.000808767 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaTCTGCGCTaacaaGaaaat 2500012 2502507 R fryA fryAp2 Sigma38 0 2502737 2502744 GATATGTT 2502731 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggcaGATATGTTcagcaAcggcg 2500012 2502507 R fryA fryAp3 Sigma38 0 2502702 2502709 GGTGCACT 2502696 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggggcGGTGCACTtaaccGgcacc 2500012 2502507 R fryA fryAp4 Sigma38 0 2502613 2502620 GCGACATT 2502607 4.52 high homology 0.001612451 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgccGCGACATTttgcaGatgca 2500012 2502507 R fryA fryAp5 Sigma38 0 2502584 2502591 TCTGCCCT 2502578 5 high homology 0.000792752 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttaTCTGCCCTtattcAacgtc 2509023 2509349 F ypeC ypeCp2 Sigma38 0 2508792 2508799 ACCACATT 2508806 3.29 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaatACCACATTgctaccGctgct 2512353 2513465 F insL insLp3 Sigma38 0 2512114 2512121 GCTAACTT 2512128 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccttcGCTAACTTctcttcAatcgg 2512353 2513465 F insL insLp4 Sigma38 0 2512305 2512312 GCTAACTT 2512317 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taagcGCTAACTTaaggGttgtg 2512353 2513465 F insL insLp6 Sigma38 0 2512216 2512223 TCTACCCT 2512229 5.41 high homology 0.000448321 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acggcTCTACCCTggtgaGtgtgc 2513665 2515854 R yfeA yfeAp3 Sigma38 0 2516017 2516024 TCTGCTTT 2516011 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtcTCTGCTTTttgccGctttt 2513665 2515854 R yfeA yfeAp4 Sigma38 0 2516041 2516048 GCTGCAAA 2516035 4.44 high homology 0.001836305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccctcGCTGCAAAgcgggGgtttt 2516063 2516138 R alaX alaXp3 Sigma38 0 2516305 2516312 GACACATT 2516299 3.51 good homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgttGACACATTcgggcGgaatt 2516489 2516833 F yfeC yfeCp6 Sigma38 0 2516454 2516461 CATACATT 2516467 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acccaCATACATTcagggAattgt 2520751 2522007 R xapB xapBp2 Sigma38 0 2522214 2522221 GCGACCTT 2522207 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccattGCGACCTTaaagtcGttgcg 2523149 2523913 F yfeN yfeNp3 Sigma38 0 2523054 2523061 GCGATATT 2523067 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattgGCGATATTaattcCtttgc 2523149 2523913 F yfeN yfeNp4 Sigma38 0 2522967 2522974 AATACACT 2522981 3.84 good homology 0.003661069 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaccAATACACTtttctcAcgcat 2524968 2525966 F yfeH yfeHp6 Sigma38 0 2524798 2524805 GATACGCT 2524811 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggccGATACGCTctcctGcacga 2525963 2526181 R ypeB ypeBp2 Sigma38 0 2526253 2526260 TCTAAACT 2526247 4.9 high homology 0.001059456 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggaTCTAAACTggcgaAggcgc 2528269 2529255 R zipA zipAp2 Sigma38 0 2529331 2529338 CTTGCACT 2529326 2.55 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgcaCTTGCACTtgagGtaatc 2528269 2529255 R zipA zipAp3 Sigma38 0 2529399 2529406 GATATGTT 2529393 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttagGATATGTTcgaaaAaacag 2528269 2529255 R zipA zipAp5 Sigma38 0 2529471 2529478 GATGAGCT 2529464 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcagGATGAGCTccttttGaccaa 2528269 2529255 R zipA zipAp6 Sigma38 0 2529439 2529446 TCTGCGTA 2529434 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatTCTGCGTAttttAccggg 2528269 2529255 R zipA zipAp8 Sigma38 0 2529363 2529370 TCTATCTT 2529356 3.36 poor homology 0.00615802 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttcaTCTATCTTtgtgctGtgaaa 2536694 2537605 R cysM cysMp1 Sigma38 0 2537733 2537740 GATAGGTT 2537727 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcctGATAGGTTgagtgAatgtt 2547668 2548567 R yfeX yfeXp4 Sigma38 0 2548703 2548710 GATACCCT 2548697 4.62 high homology 0.001430116 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggacGATACCCTgaaaaActgga 2556880 2558088 F intZ intZp2 Sigma38 0 2556796 2556803 CCTAAACA 2556809 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttgCCTAAACAcgcccGttatt 2556880 2558088 F intZ intZp6 Sigma38 0 2556667 2556674 TATACATT 2556680 4.38 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgaTATACATTgccgaAcaatg 2559390 2559635 F yffM yffMp1 Sigma38 0 2559365 2559372 GCCAGCTT 2559378 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caattGCCAGCTTaaaagAcgggc 2560133 2560549 F yffO yffOp3 Sigma38 0 2559925 2559932 ACCAGACT 2559937 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtgaACCAGACTttcaAtgcct 2560133 2560549 F yffO yffOp4 Sigma38 0 2560003 2560010 GTTAGATT 2560015 2.75 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctccGTTAGATTgctaAcgcca 2560133 2560549 F yffO yffOp6 Sigma38 0 2560017 2560024 GCCAAAAT 2560029 3.23 poor homology 0.007372488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctaacGCCAAAATtagcGctgaa 2562545 2563354 F yffS yffSp3 Sigma38 0 2562475 2562482 GTTACGCT 2562488 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttccGTTACGCTtacccTccacc 2563503 2564906 R eutA eutAp1 Sigma38 0 2565036 2565043 GCTGCCAA 2565030 3.37 poor homology 0.005976023 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgccGCTGCCAAcatgaAcgcca 2563503 2564906 R eutA eutAp2 Sigma38 0 2565072 2565079 GCTGCTTT 2565065 4.09 good homology 0.002879899 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttccGCTGCTTTcgccctGggcga 2574120 2576399 R maeB maeBp5 Sigma38 0 2576461 2576468 GCCACGTT 2576456 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtgcGCCACGTTgtggGcaggg 2580925 2581500 R nudK nudKp1 Sigma38 0 2581562 2581569 GATAGCCT 2581556 3.36 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcactGATAGCCTgcgcaGacaaa 2581568 2583547 R aegA aegAp5 Sigma38 0 2583780 2583787 GCCAGACT 2583774 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccggGCCAGACTggccgAgacgg 2583753 2585453 F narQ narQp4 Sigma38 0 2583528 2583535 GCCATAAT 2583541 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttgGCCATAATaaaacGattca 2583753 2585453 F narQ narQp5 Sigma38 0 2583659 2583666 GCTATAAA 2583672 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttcGCTATAAActgtgGcagat 2583753 2585453 F narQ narQp6 Sigma38 0 2583661 2583668 TATAAACT 2583674 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgcTATAAACTgtggcAgatca 2583753 2585453 F narQ narQp7 Sigma38 0 2583696 2583703 ACTAAATT 2583710 3.41 poor homology 0.0057417 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cactgACTAAATTgcgtttCagcga 2591094 2591792 R ypfH ypfHp3 Sigma38 0 2591996 2592003 ACCACACT 2591991 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatgtACCACACTtaaaCtttca 2591866 2593881 R tmcA tmcAp2 Sigma38 0 2593917 2593924 AATGCAAT 2593910 2.63 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcacAATGCAATacttttGgtaaa 2591866 2593881 R tmcA tmcAp3 Sigma38 0 2593932 2593939 GCGGCGAT 2593926 2.71 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgacaGCGGCGATccggcAcaatg 2591866 2593881 R tmcA tmcAp4 Sigma38 0 2593956 2593963 GCTGGTTT 2593951 2.83 poor homology 0.010254896 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctacaGCTGGTTTaaacGtggtt 2612842 2613903 R yfgO yfgOp4 Sigma38 0 2614104 2614111 TCTATCCT 2614098 3.83 good homology 0.003697864 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaccTCTATCCTgtattTctgga 2612842 2613903 R yfgO yfgOp6 Sigma38 0 2613946 2613953 GATACAAT 2613940 4.89 high homology 0.001091721 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttcGATACAATtgcggAtcgca 2616893 2618182 R uraA uraAp6 Sigma38 0 2618316 2618323 GATACATT 2618310 5.21 high homology 0.000696112 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcacgGATACATTattccGggcct 2621066 2623132 F ppk ppkp2 Sigma38 0 2621016 2621023 GCCATAAT 2621029 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctcGCCATAATatccaGgcagt 2621066 2623132 F ppk ppkp4 Sigma38 0 2620875 2620882 GCTACGCT 2620887 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaggGCTACGCTgccgAcgagt 2627814 2628332 F yfgH yfgHp3 Sigma38 0 2627691 2627698 TATAAATT 2627705 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attttTATAAATTattcccTgcgtg 2627814 2628332 F yfgH yfgHp6 Sigma38 0 2627745 2627752 AATACATT 2627758 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacgcAATACATTtacttTcctct 2627814 2628332 F yfgH yfgHp8 Sigma38 0 2627681 2627688 GATATATT 2627694 3.63 good homology 0.004748151 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaatGATATATTtttatAaatta 2628980 2630557 R guaA guaAp3 Sigma38 0 2630677 2630684 GCCACGTT 2630672 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggaaaGCCACGTTcacgAcgtga 2633906 2635378 R der derp3 Sigma38 0 2635568 2635575 TCCAGACT 2635562 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggttTCCAGACTgaaccGgttgc 2641151 2642305 R rlmN rlmNp4 Sigma38 0 2642408 2642415 GCCAGAAT 2642403 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtgcGCCAGAATttgtAcaatg 2642455 2642886 R ndk ndkp1 Sigma38 0 2642978 2642985 GTTACCTT 2642972 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatGTTACCTTcatcaAtagtc 2651877 2652180 F ryfA ryfAp3 Sigma38 0 2651800 2651807 GAGACAAT 2651812 2.57 poor homology 0.012778388 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcgGAGACAATactcGccagt 2651877 2652180 F ryfA ryfAp8 Sigma38 0 2651748 2651755 GCGGCCTT 2651760 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttcGCGGCCTTtccaGcaggt 2651877 2652180 F ryfA ryfAp10 Sigma38 0 2651711 2651718 GCCAAAAT 2651724 3.23 poor homology 0.007372488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaccGCCAAAATcaggcGgtttt 2652179 2652955 R sseB sseBp3 Sigma38 0 2653052 2653059 CCTACAAA 2653047 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccggCCTACAAAttctGcaaat 2652179 2652955 R sseB sseBp4 Sigma38 0 2653110 2653117 GCTAATCT 2653105 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgataGCTAATCTgttaAcggcg 2653097 2654380 R pepB pepBp3 Sigma38 0 2654485 2654492 TCTATGCT 2654479 3.82 good homology 0.003772566 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agttaTCTATGCTcctggGgcttc 2654558 2654758 R iscX iscXp2 Sigma38 0 2654794 2654801 GTTACACT 2654789 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccgcGTTACACTatcaAccatg 2657585 2657908 R iscA iscAp4 Sigma38 0 2657986 2657993 TCTATTCT 2657980 2.57 poor homology 0.012778388 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgtTCTATTCTggcagAagacg 2657585 2657908 R iscA iscAp5 Sigma38 0 2657959 2657966 GCCGCCAT 2657953 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaaaGCCGCCATtgcggActata 2660605 2661345 R trmJ trmJp3 Sigma38 0 2661587 2661594 TCTACGTT 2661582 4.93 high homology 0.000939653 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttaTCTACGTTggtcAcgaaa 2661464 2662267 F suhB suhBp2 Sigma38 0 2661415 2661422 TATACTCT 2661428 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctgcTATACTCTgcgccGttttc 2661464 2662267 F suhB suhBp6 Sigma38 0 2661413 2661420 GCTATACT 2661425 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgctGCTATACTctgcGccgtt 2662412 2663266 F yfhR yfhRp1 Sigma38 0 2662217 2662224 GCCATGCT 2662230 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaGCCATGCTggcgaAcatgc 2662412 2663266 F yfhR yfhRp3 Sigma38 0 2662248 2662255 GCGACGCT 2662261 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttaaGCGACGCTctgaaGcgtta 2664729 2665868 R hcaT hcaTp4 Sigma38 0 2665893 2665900 CCCAGACT 2665888 2.82 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaacCCCAGACTaacgCctcct 2671368 2671790 F yphA yphAp1 Sigma38 0 2671256 2671263 GCTTAAAT 2671268 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcgcGCTTAAATcactGtaacc 2671368 2671790 F yphA yphAp3 Sigma38 0 2671227 2671234 GCGAAACT 2671239 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgatGCGAAACTgctgAtagat 2671368 2671790 F yphA yphAp4 Sigma38 0 2671130 2671137 TCTGCAAA 2671143 3.61 good homology 0.004892754 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttaaTCTGCAAAacggcGtgctt 2677486 2680767 R yphG yphGp1 Sigma38 0 2680936 2680943 TCCAGAAT 2680930 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcagtTCCAGAATcacgcAtttgt 2677486 2680767 R yphG yphGp3 Sigma38 0 2680807 2680814 GCCACAAA 2680800 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acactGCCACAAAtcttttAattca 2677486 2680767 R yphG yphGp7 Sigma38 0 2680815 2680822 AATACACT 2680809 3.84 good homology 0.003661069 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttcAATACACTgccacAaatct 2677486 2680767 R yphG yphGp8 Sigma38 0 2680827 2680834 GCCAGATT 2680821 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acattGCCAGATTgttcaAtacac 2680885 2682078 F yphH yphHp4 Sigma38 0 2680746 2680753 GCCACACT 2680760 5.6 high homology 0.000349153 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcttGCCACACTtttactGgagtc 2686815 2687528 R yfhG yfhGp4 Sigma38 0 2687663 2687670 GCTATTTT 2687658 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcagGCTATTTTatttGtcagt 2686815 2687528 R yfhG yfhGp5 Sigma38 0 2687676 2687683 CCTATCCT 2687670 3.14 poor homology 0.007750484 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacagCCTATCCTatcagGctatt 2686815 2687528 R yfhG yfhGp6 Sigma38 0 2687544 2687551 GATAGGCT 2687539 3.35 poor homology 0.00628242 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actggGATAGGCTttaaGtctgg 2686815 2687528 R yfhG yfhGp7 Sigma38 0 2687576 2687583 TCCAGACT 2687571 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccatgTCCAGACTgtctGcaaca 2696781 2697629 F yfhH yfhHp2 Sigma38 0 2696755 2696762 GCCACTAT 2696769 2.48 poor homology 0.014122302 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtcGCCACTATttcatcGcgagg 2696781 2697629 F yfhH yfhHp4 Sigma38 0 2696615 2696622 ACTACATA 2696628 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgctACTACATAgcctaAcagat 2698640 2699020 R acpS acpSp1 Sigma38 0 2699210 2699217 GCGACCTT 2699205 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagccGCGACCTTtgccGcaagc 2710918 2712252 F srmB srmBp3 Sigma38 0 2710886 2710893 TCTATAAT 2710898 4.1 good homology 0.002822873 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taacgTCTATAATcagcGcccca 2712461 2713342 R yfiE yfiEp2 Sigma38 0 2713583 2713590 CCCAGACT 2713576 2.82 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatCCCAGACTcatcccTgccag 2712461 2713342 R yfiE yfiEp3 Sigma38 0 2713350 2713357 GATAGGTT 2713345 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcGATAGGTTtgggGttatg 2712461 2713342 R yfiE yfiEp4 Sigma38 0 2713517 2713524 GCGAGAAT 2713512 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaggGCGAGAATattgTtcggt 2712461 2713342 R yfiE yfiEp8 Sigma38 0 2713368 2713375 TCTAGATT 2713363 4.74 high homology 0.001307027 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatatTCTAGATTcgatAttttc 2713445 2714032 F eamB eamBp3 Sigma38 0 2713420 2713427 TCTACCAA 2713433 2.96 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tactgTCTACCAAaacagAggaga 2713445 2714032 F eamB eamBp4 Sigma38 0 2713370 2713377 TCTAGAAT 2713383 4.42 high homology 0.001969452 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgaaTCTAGAATataaaAacatt 2715513 2716550 R yfiF yfiFp5 Sigma38 0 2716748 2716755 ACTAACCT 2716743 2.82 poor homology 0.010462059 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcataACTAACCTcgggAtgagt 2717245 2717943 F yfiP yfiPp5 Sigma38 0 2717215 2717222 GCGACAAT 2717227 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctctGCGACAATggcgTttttt 2720749 2722104 F pssA pssAp2 Sigma38 0 2720665 2720672 TCGGGACT 2720679 2.49 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttaaTCGGGACTggtgttAttatt 2720749 2722104 F pssA pssAp3 Sigma38 0 2720718 2720725 CCTTCAAT 2720731 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggacCCTTCAATgaacaGagaag 2720749 2722104 F pssA pssAp7 Sigma38 0 2720699 2720706 TCTGCATT 2720712 5.59 high homology 0.000367055 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtcgTCTGCATTgcacaGaggac 2722150 2722473 F yfiM yfiMp1 Sigma38 0 2721917 2721924 TCCACGAT 2721930 2.9 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgaTCCACGATccgcaActtga 2722470 2723768 R kgtP kgtPp1 Sigma38 0 2723885 2723892 GCTAACTA 2723879 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcctGCTAACTAaattcAtggtt 2722470 2723768 R kgtP kgtPp4 Sigma38 0 2723881 2723888 ACTAAATT 2723876 3.41 poor homology 0.0057417 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctaACTAAATTcatgGttaag 2722470 2723768 R kgtP kgtPp5 Sigma38 0 2723986 2723993 GCCAGATT 2723980 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catatGCCAGATTcagcaAcggat 2732325 2733056 R yfiH yfiHp3 Sigma38 0 2733193 2733200 GCTACATG 2733187 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggcGCTACATGcaaccAtgctg 2732325 2733056 R yfiH yfiHp5 Sigma38 0 2733222 2733229 TCCACGCT 2733216 3.7 good homology 0.004339483 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcTCCACGCTgcgtaAgtttg 2736970 2738091 R tyrA tyrAp2 Sigma38 0 2738157 2738164 GATGCCTT 2738151 3.74 good homology 0.004127844 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaccGATGCCTTgctgcGtgaaa 2736970 2738091 R tyrA tyrAp3 Sigma38 0 2738180 2738187 CCTGCATT 2738174 4.9 high homology 0.001007785 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgatgCCTGCATTagctgGgaaat 2739382 2739747 F yfiL yfiLp3 Sigma38 0 2739258 2739265 TCCATATT 2739270 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcaaTCCATATTtcgtAcattt 2739382 2739747 F yfiL yfiLp5 Sigma38 0 2739325 2739332 GATAAATT 2739337 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtataGATAAATTtacaCtccct 2739382 2739747 F yfiL yfiLp6 Sigma38 0 2739331 2739338 TTTACACT 2739345 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataaaTTTACACTccctttGaaaac 2739382 2739747 F yfiL yfiLp11 Sigma38 0 2739356 2739363 GCTATGCT 2739369 4.66 high homology 0.001401797 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatccGCTATGCTttgaaAaagga 2745984 2746775 F ypjD ypjDp1 Sigma38 0 2745787 2745794 GCGACAAA 2745800 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtgcGCGACAAAcgatcGgttaa 2745984 2746775 F ypjD ypjDp3 Sigma38 0 2745855 2745862 GCGACACA 2745868 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caatcGCGACACAtcatcAgtatt 2745984 2746775 F ypjD ypjDp6 Sigma38 0 2745939 2745946 GCTATACT 2745952 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgacGCTATACTgcttcTctttc 2746796 2748082 F yfjD yfjDp5 Sigma38 0 2746639 2746646 TCTATATT 2746652 4.42 high homology 0.001892229 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttgTCTATATTgtgctGctgtg 2748853 2749731 F nadK nadKp3 Sigma38 0 2748763 2748770 GCTAACTT 2748776 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctcGCTAACTTcgcttAttatg 2752030 2752320 R yfjF yfjFp1 Sigma38 0 2752359 2752366 GCTAATAT 2752353 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcgGCTAATATggtccAggctt 2752918 2753400 F smpB smpBp2 Sigma38 0 2752733 2752740 GCTAATCT 2752746 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtccgGCTAATCTgaggcAtaaca 2752918 2753400 F smpB smpBp4 Sigma38 0 2752840 2752847 GCTAAGAT 2752852 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcatGCTAAGATagagCcttgt 2752918 2753400 F smpB smpBp6 Sigma38 0 2752693 2752700 GATACATT 2752707 5.21 high homology 0.000696112 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taactGATACATTtgctccGcgctg 2753615 2753977 F ssrA ssrAp1 Sigma38 0 2753529 2753536 GCTACATG 2753543 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcagGCTACATGggtgctAaatct 2753615 2753977 F ssrA ssrAp3 Sigma38 0 2753402 2753409 CCTGCACT 2753416 5.37 high homology 0.000471307 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaCCTGCACTccaattAttgac 2756666 2756878 F alpA alpAp3 Sigma38 0 2756614 2756621 GATACCCA 2756626 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaGATACCCAttaaTctctc 2756666 2756878 F alpA alpAp6 Sigma38 0 2756503 2756510 TCTACAAA 2756515 4.02 good homology 0.003088715 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtttTCTACAAAtttgTtcata 2757007 2758416 F yfjI yfjIp4 Sigma38 0 2756958 2756965 GCCATATT 2756971 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaataGCCATATTtgctaAacaat 2757007 2758416 F yfjI yfjIp5 Sigma38 0 2756772 2756779 GATACGAT 2756784 3.82 good homology 0.00381048 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accacGATACGATgccaCctttc 2757007 2758416 F yfjI yfjIp6 Sigma38 0 2756967 2756974 GCTAAACA 2756981 4.06 good homology 0.002967605 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatttGCTAAACAatttctTaattt 2757007 2758416 F yfjI yfjIp7 Sigma38 0 2756780 2756787 GCCACCTT 2756793 4.07 good homology 0.002938077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgatGCCACCTTtcccaAaaagc 2759373 2761562 R yfjK yfjKp1 Sigma38 0 2761755 2761762 TCTAATCT 2761750 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgacTCTAATCTactaAccgag 2763535 2763798 R yfjM yfjMp4 Sigma38 0 2763866 2763873 GCTAAATT 2763860 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatttGCTAAATTtagccAcctga 2763535 2763798 R yfjM yfjMp5 Sigma38 0 2763900 2763907 TCTACAAT 2763895 5.68 high homology 0.000315927 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaacTCTACAATaataCccccc 2765732 2766595 F yfjP yfjPp3 Sigma38 0 2765514 2765521 ACTAAATT 2765527 3.41 poor homology 0.0057417 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccacgACTAAATTtccccCccttt 2767725 2768426 F yfjR yfjRp2 Sigma38 0 2767652 2767659 CATACCCT 2767664 3.1 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtcCATACCCTgtccGccccc 2767725 2768426 F yfjR yfjRp3 Sigma38 0 2767521 2767528 GCCACGTT 2767533 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgttGCCACGTTgttaAtatcg 2771340 2773043 F yfjW yfjWp2 Sigma38 0 2771271 2771278 GCTAGAAA 2771283 3.59 good homology 0.005092431 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggttGCTAGAAAgtcgAtgatt 2773941 2774399 F yfjX yfjXp1 Sigma38 0 2773856 2773863 GCAACATT 2773869 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taccaGCAACATTtcaccTtccca 2776168 2780748 R ypjA ypjAp1 Sigma38 0 2780767 2780774 TATTCACT 2780761 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcagTATTCACTtttcaGaggat 2776168 2780748 R ypjA ypjAp2 Sigma38 0 2780923 2780930 GCCTCATT 2780917 2.8 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatGCCTCATTcttatGcggaa 2776168 2780748 R ypjA ypjAp5 Sigma38 0 2780776 2780783 GCTACTCA 2780769 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaacGCTACTCAgtattcActttt 2776168 2780748 R ypjA ypjAp6 Sigma38 0 2780939 2780946 ACTGCGTT 2780933 3.51 good homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcgcACTGCGTTtaaaaAatgcc 2776168 2780748 R ypjA ypjAp9 Sigma38 0 2780954 2780961 ACCACACT 2780948 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atccaACCACACTtcagcGcactg 2776168 2780748 R ypjA ypjAp10 Sigma38 0 2780862 2780869 AATACACT 2780855 3.84 good homology 0.003661069 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacacAATACACTtgcgctGtctct 2783784 2783859 R ileY ileYp5 Sigma38 0 2784086 2784093 GATACAAA 2784079 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattaGATACAAAatcattAcaaag 2793696 2794358 F csiR csiRp2 Sigma38 0 2793455 2793462 GCGAAATT 2793468 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggaaGCGAAATTcgcttGcgaat 2794359 2794808 R ygaU ygaUp4 Sigma38 0 2794842 2794849 GCTACACT 2794836 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctctGCTACACTttctgAgtgtt 2795233 2795532 F ygaV ygaVp3 Sigma38 0 2795158 2795165 TTTACGCT 2795171 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctcaTTTACGCTgctgaGgctgg 2797186 2797635 F ygaW ygaWp5 Sigma38 0 2797106 2797113 GCGAAAAT 2797118 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctatGCGAAAATgcagAtggca 2797186 2797635 F ygaW ygaWp7 Sigma38 0 2797096 2797103 TATACGCT 2797109 3.78 good homology 0.003926527 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcgaTATACGCTatgcgAaaatg 2797186 2797635 F ygaW ygaWp9 Sigma38 0 2796999 2797006 TCCACAAT 2797012 3.98 good homology 0.003247077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaTCCACAATgtacaAaaaac 2797186 2797635 F ygaW ygaWp10 Sigma38 0 2797039 2797046 TCTACAAA 2797052 4.02 good homology 0.003088715 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttaTCTACAAAaactgActaaa 2807639 2808376 F ygaZ ygaZp3 Sigma38 0 2807389 2807396 GCTAATTT 2807403 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttcGCTAATTTcagcctCagcct 2807639 2808376 F ygaZ ygaZp5 Sigma38 0 2807447 2807454 GCGACGAT 2807461 3.12 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctggcGCGACGATtgccctGgttaa 2807639 2808376 F ygaZ ygaZp7 Sigma38 0 2807540 2807547 TTTACACT 2807553 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtggcTTTACACTtataaGggtgt 2812905 2814461 R gshA gshAp3 Sigma38 0 2814635 2814642 GATGCGCA 2814630 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggatgGATGCGCAtctcGtgggg 2812905 2814461 R gshA gshAp4 Sigma38 0 2814692 2814699 GCTATTAT 2814685 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcacGCTATTATtaagctGgatgc 2812905 2814461 R gshA gshAp6 Sigma38 0 2814584 2814591 GTTACGCT 2814578 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagcGTTACGCTatgttGcagtt 2812905 2814461 R gshA gshAp8 Sigma38 0 2814519 2814526 CCTGCACA 2814514 3.71 good homology 0.004296305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaggCCTGCACAtatgGtcacc 2812905 2814461 R gshA gshAp9 Sigma38 0 2814579 2814586 GCTATGTT 2814572 4.18 good homology 0.002478752 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttacGCTATGTTgcagttGcagca 2814534 2814962 R yqaA yqaAp1 Sigma38 0 2815087 2815094 GCCAGACA 2815080 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccgcGCCAGACAcattttTgttgt 2814534 2814962 R yqaA yqaAp3 Sigma38 0 2815083 2815090 GACACATT 2815076 3.51 good homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgccaGACACATTtttgttGtgcgc 2820161 2820661 R recX recXp1 Sigma38 0 2820711 2820718 GATACACA 2820704 4.02 good homology 0.003027555 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtttGATACACAagggtcGcatct 2840595 2841065 R hycI hycIp2 Sigma38 0 2841281 2841288 GCCACTCT 2841276 3.28 poor homology 0.006805664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggattGCCACTCTggagGcaggc 2840595 2841065 R hycI hycIp3 Sigma38 0 2841211 2841218 TCGACATT 2841206 3.69 good homology 0.004427147 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtcaTCGACATTaaccAtgtgc 2859452 2860360 F ygbJ ygbJp6 Sigma38 0 2859236 2859243 GCGACGCT 2859249 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttgGCGACGCTctacgGgtatc 2859452 2860360 F ygbJ ygbJp7 Sigma38 0 2859287 2859294 TCTACGCT 2859299 5.4 high homology 0.000461975 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacatTCTACGCTatttGcctgc 2859452 2860360 F ygbJ ygbJp8 Sigma38 0 2859213 2859220 GCTACCAT 2859226 5.45 high homology 0.000418012 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttcaGCTACCATctcaaGgatga 2861615 2862253 F ygbL ygbLp2 Sigma38 0 2861415 2861422 GACACGCT 2861428 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgtGACACGCTttattGtcgca 2866915 2867541 R pcm pcmp1 Sigma38 0 2867710 2867717 AATACGCT 2867704 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcggcAATACGCTgtactGgattg 2868277 2869326 R truD truDp5 Sigma38 0 2869340 2869347 GCTACTCA 2869334 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtggcGCTACTCAttaagGcaaca 2868277 2869326 R truD truDp6 Sigma38 0 2869531 2869538 TATACCCT 2869525 3.79 good homology 0.003848776 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agggtTATACCCTtggcaAcgtcg 2871409 2872014 R cysC cysCp2 Sigma38 0 2872053 2872060 GCCACTTT 2872048 2.8 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgtcGCCACTTTccgcActggg 2874603 2875640 F iap iapp1 Sigma38 0 2874477 2874484 GCTAATAT 2874490 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaaaGCTAATATcaaaaAgtgct 2874603 2875640 F iap iapp2 Sigma38 0 2874372 2874379 GCTATTTT 2874386 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataccGCTATTTTcttgccAtcaga 2882575 2885241 R ygcB ygcBp2 Sigma38 0 2885484 2885491 TATAGAAT 2885477 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggTATAGAATggcgtcGggtgc 2882575 2885241 R ygcB ygcBp3 Sigma38 0 2885409 2885416 GCGATATT 2885402 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccagGCGATATTtctatcAacctg 2890236 2890601 F queD queDp3 Sigma38 0 2890053 2890060 ACTAACCT 2890066 2.82 poor homology 0.010462059 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcgACTAACCTgttttAgcaat 2890679 2891950 F ygcN ygcNp2 Sigma38 0 2890638 2890645 GCTATGTT 2890651 4.18 good homology 0.002478752 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaacGCTATGTTagggtGttgtg 2892941 2893801 R ygcQ ygcQp1 Sigma38 0 2893874 2893881 GCGACGCT 2893868 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcggaGCGACGCTgattgAtgggc 2895986 2897440 R ygcU ygcUp3 Sigma38 0 2897609 2897616 GCGATACT 2897604 3.41 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgggGCGATACTcaggAtttaa 2897510 2898295 R ygcW ygcWp8 Sigma38 0 2898331 2898338 GTTACCTT 2898325 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggaaGTTACCTTtctttTttttt 2897510 2898295 R ygcW ygcWp9 Sigma38 0 2898393 2898400 GCTAAAAA 2898387 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttatGCTAAAAAttatcTccagt 2902769 2903440 R ygcF ygcFp1 Sigma38 0 2903544 2903551 GATATGTT 2903539 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaacGATATGTTtcgcAttttt 2903733 2904605 F ygcG ygcGp3 Sigma38 0 2903709 2903716 TCCAGATT 2903722 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaTCCAGATTtaatgAgaaat 2907916 2908707 R mazG mazGp1 Sigma38 0 2908755 2908762 TCTATTCT 2908750 2.57 poor homology 0.012778388 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcactTCTATTCTggtcAcaggt 2907916 2908707 R mazG mazGp2 Sigma38 0 2908797 2908804 GCCAAAAT 2908792 3.23 poor homology 0.007372488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaaaGCCAAAATtaacGtactg 2913079 2915835 F barA barAp5 Sigma38 0 2913025 2913032 GCGAGACT 2913038 3.73 good homology 0.004127844 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattgGCGAGACTttctcAattta 2920557 2921006 R yqcA yqcAp1 Sigma38 0 2921029 2921036 GATAAGTT 2921024 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggagaGATAAGTTcctaAtccag 2920557 2921006 R yqcA yqcAp2 Sigma38 0 2921229 2921236 GCTGAGCA 2921223 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcggtGCTGAGCAttttgGcctcc 2920557 2921006 R yqcA yqcAp3 Sigma38 0 2921200 2921207 GCTACATG 2921193 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaatGCTACATGccagtcAgttgt 2920557 2921006 R yqcA yqcAp4 Sigma38 0 2921246 2921253 GCCAGAAT 2921241 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttacGCCAGAATcgcaGcggtg 2922757 2923302 R syd sydp4 Sigma38 0 2923343 2923350 GATAAACT 2923337 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaccaGATAAACTaaacgAcaagt 2924330 2925694 F ygdH ygdHp1 Sigma38 0 2924089 2924096 GTTACGCT 2924103 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacctGTTACGCTtctgccAgccag 2929077 2929832 F ygdG ygdGp1 Sigma38 0 2929042 2929049 GTTACCCT 2929054 3.42 poor homology 0.005572007 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaatGTTACCCTtatcGcctga 2938165 2939265 R rlmM rlmMp2 Sigma38 0 2939499 2939506 CATACGCT 2939494 3.09 poor homology 0.008066787 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtttCATACGCTggcgAtctta 2939258 2939653 R ygdD ygdDp1 Sigma38 0 2939895 2939902 GCTATCCA 2939889 3 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagcgGCTATCCAcgggcAgggag 2940940 2941167 R ygdI ygdIp5 Sigma38 0 2941291 2941298 GCTAACCA 2941285 3 poor homology 0.008651695 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agagtGCTAACCAtcagaAttatc 2940940 2941167 R ygdI ygdIp6 Sigma38 0 2941270 2941277 GATATCCT 2941264 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctgGATATCCTggcgaAgccgc 2940940 2941167 R ygdI ygdIp8 Sigma38 0 2941381 2941388 GCGAAACT 2941375 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgggcGCGAAACTgcgcgGgatta 2941359 2942564 F csdA csdAp4 Sigma38 0 2941217 2941224 GCTAAAAT 2941229 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacagGCTAAAATtaacGcctaa 2943058 2943864 R csdL csdLp3 Sigma38 0 2943889 2943896 GATAACCT 2943883 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaggGATAACCTcgcccTtttta 2943058 2943864 R csdL csdLp4 Sigma38 0 2943978 2943985 CCTACAAA 2943973 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccggCCTACAAAtcatGcaaat 2944103 2945200 R mltA mltAp1 Sigma38 0 2945395 2945402 GATGCGCA 2945390 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgtgGATGCGCActatActccg 2944103 2945200 R mltA mltAp2 Sigma38 0 2945233 2945240 TCTTCGTT 2945226 2.6 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttaTCTTCGTTgcgcctTatttt 2944103 2945200 R mltA mltAp4 Sigma38 0 2945266 2945273 GCTGCTCA 2945261 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagagGCTGCTCAtttcAttaaa 2944103 2945200 R mltA mltAp7 Sigma38 0 2945388 2945395 ACTATACT 2945381 3.89 good homology 0.003517517 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcgcACTATACTccgctcGcgttt 2945779 2947032 R amiC amiCp2 Sigma38 0 2947061 2947068 GTTACACA 2947055 2.83 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacttGTTACACAgcttaGatttc 2948657 2950483 R recD recDp1 Sigma38 0 2950679 2950686 TATACCCT 2950672 3.79 good homology 0.003848776 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcttTATACCCTggcgctGcatcg 2948657 2950483 R recD recDp2 Sigma38 0 2950702 2950709 GCTATGAT 2950696 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaccGCTATGATctgcaAtatca 2967684 2968373 F mutH mutHp6 Sigma38 0 2967624 2967631 GTTACACT 2967636 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaGTTACACTgcgaAtattc 2969293 2969511 F ygdR ygdRp2 Sigma38 0 2969196 2969203 TTTACCCT 2969208 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcctTTTACCCTcacaGtttaa 2970691 2971884 R lplT lplTp1 Sigma38 0 2972028 2972035 GATAAGTT 2972022 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcgcGATAAGTTgcaacAgtatg 2970691 2971884 R lplT lplTp2 Sigma38 0 2971973 2971980 GCGATATT 2971968 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accgcGCGATATTcgctAtctga 2977965 2978657 R ygeA ygeAp2 Sigma38 0 2978766 2978773 GATGTGCT 2978761 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggccgGATGTGCTgtacAtccgg 2977965 2978657 R ygeA ygeAp3 Sigma38 0 2978761 2978768 GCTGTACA 2978756 3.65 good homology 0.004654131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgtGCTGTACAtccgGccctt 2977965 2978657 R ygeA ygeAp4 Sigma38 0 2978899 2978906 GCTGAACA 2978894 3.65 good homology 0.004654131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgcGCTGAACAttgcGtttgt 2980519 2981280 R kduD kduDp3 Sigma38 0 2981383 2981390 TATACCTT 2981377 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagctTATACCTTtatctGgggca 2981310 2982146 R kduI kduIp3 Sigma38 0 2982353 2982360 CATACATT 2982347 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcgaCATACATTttctgGgctcc 2981310 2982146 R kduI kduIp4 Sigma38 0 2982302 2982309 TCGACACT 2982296 4.16 good homology 0.002528826 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtgaTCGACACTgcactTttttt 2982433 2983614 R yqeF yqeFp10 Sigma38 0 2983846 2983853 TCTACAAA 2983841 4.02 good homology 0.003088715 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcaTCTACAAAttaaAcaaaa 2983869 2985098 F yqeG yqeGp2 Sigma38 0 2983799 2983806 CCCATACT 2983813 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatctCCCATACTtaacctGgttta 2983869 2985098 F yqeG yqeGp7 Sigma38 0 2983855 2983862 GATACGTT 2983868 4.14 good homology 0.002658482 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagatGATACGTTcagatAatgtc 2985558 2986190 F yqeH yqeHp3 Sigma38 0 2985330 2985337 TATACCAT 2985343 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attctTATACCATgagatAgttat 2986524 2987333 F yqeI yqeIp2 Sigma38 0 2986397 2986404 GCAACATT 2986409 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgttGCAACATTaaagCctcat 2986524 2987333 F yqeI yqeIp3 Sigma38 0 2986444 2986451 TATATATT 2986458 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attaaTATATATTtatgccGtaaat 2987957 2988382 R yqeK yqeKp2 Sigma38 0 2988595 2988602 GCTATTAT 2988590 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtagGCTATTATtaatAtttcg 2987957 2988382 R yqeK yqeKp4 Sigma38 0 2988568 2988575 TTTACATT 2988561 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcatTTTACATTtctctcAtttga 2987957 2988382 R yqeK yqeKp7 Sigma38 0 2988477 2988484 ACTATATT 2988472 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatgACTATATTtgttAtcggc 2989290 2989781 F ygeG ygeGp5 Sigma38 0 2989054 2989061 CATACACA 2989067 2.5 poor homology 0.013704925 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggtCATACACAttaagGcattt 2989290 2989781 F ygeG ygeGp6 Sigma38 0 2989056 2989063 TACACATT 2989069 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtcaTACACATTaaggcAtttat 2989290 2989781 F ygeG ygeGp7 Sigma38 0 2989175 2989182 TATACCAT 2989188 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaTATACCATaagcaAtgcaa 2990116 2991492 F ygeH ygeHp4 Sigma38 0 2990055 2990062 GCCATAAT 2990067 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaataGCCATAATttctAttgct 2990116 2991492 F ygeH ygeHp7 Sigma38 0 2989980 2989987 GATAAATT 2989993 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctaaGATAAATTagtgaAcacaa 2990116 2991492 F ygeH ygeHp9 Sigma38 0 2989925 2989932 TCTACTTT 2989938 3.68 good homology 0.004561973 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacaaTCTACTTTatcaaAattga 2991660 2991878 F ygeI ygeIp4 Sigma38 0 2991562 2991569 TCTAAGAT 2991574 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaataTCTAAGATattcAcctta 2991660 2991878 F ygeI ygeIp5 Sigma38 0 2991488 2991495 GATAAATT 2991502 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatgcGATAAATTtttattGacgca 2997158 2997913 R ygeR ygeRp4 Sigma38 0 2998135 2998142 GATAAAAT 2998130 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtggcGATAAAATcaatGtgata 2997158 2997913 R ygeR ygeRp5 Sigma38 0 2998121 2998128 GATAAATT 2998114 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatgtGATAAATTgggattAttacg 2997158 2997913 R ygeR ygeRp6 Sigma38 0 2997946 2997953 GCTATGAT 2997940 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctGCTATGATaaggcGtcttg 3005532 3006728 F ygeX ygeXp3 Sigma38 0 3005353 3005360 CCTACAAA 3005367 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgctaCCTACAAAgaagccAgctgg 3005532 3006728 F ygeX ygeXp4 Sigma38 0 3005349 3005356 GCTACCTA 3005362 4.11 good homology 0.0026852 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtatcGCTACCTAcaaagAagcca 3008050 3009435 F hyuA hyuAp2 Sigma38 0 3007842 3007849 TCTATCAT 3007855 3.04 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgtaTCTATCATgggccGtcacg 3008050 3009435 F hyuA hyuAp3 Sigma38 0 3007950 3007957 GCCGCGAT 3007962 3.32 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgtGCCGCGATgtacGctgca 3008050 3009435 F hyuA hyuAp4 Sigma38 0 3008002 3008009 TCTTCACT 3008015 4.15 good homology 0.002605841 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attacTCTTCACTtattcCcctcc 3008050 3009435 F hyuA hyuAp5 Sigma38 0 3007962 3007969 GCTGCAAT 3007976 6.1 high homology 0.000125903 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtacGCTGCAATcccgttAagctg 3009483 3010415 F yqeA yqeAp2 Sigma38 0 3009451 3009458 TATACACA 3009464 3.19 poor homology 0.007446583 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggatcTATACACAatcaaGaatga 3009483 3010415 F yqeA yqeAp3 Sigma38 0 3009449 3009456 TCTATACA 3009462 3.24 poor homology 0.007154598 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agggaTCTATACAcaatcAagaat 3010636 3012261 R yqeB yqeBp3 Sigma38 0 3012495 3012502 GCCACCCT 3012489 4.54 high homology 0.001564796 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttcGCCACCCTcagggGgcgtt 3012309 3013079 R yqeC yqeCp3 Sigma38 0 3013320 3013327 ACTAAAAT 3013314 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggtgACTAAAATaattcGgctac 3012309 3013079 R yqeC yqeCp8 Sigma38 0 3013306 3013313 GCTACAAA 3013300 4.85 high homology 0.001136275 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attcgGCTACAAAactgcAacgca 3013182 3013760 F mocA mocAp2 Sigma38 0 3012981 3012988 GCTGGTTT 3012995 2.83 poor homology 0.010254896 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcaaGCTGGTTTtcccccCagcac 3013182 3013760 F mocA mocAp3 Sigma38 0 3013096 3013103 TCTGGGAT 3013109 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acctcTCTGGGATaaattAtcccc 3013182 3013760 F mocA mocAp5 Sigma38 0 3013028 3013035 TCTGCGCA 3013041 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgttTCTGCGCAcctaaAtcaat 3013182 3013760 F mocA mocAp6 Sigma38 0 3013101 3013108 GATAAATT 3013115 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctggGATAAATTatccccAactta 3013182 3013760 F mocA mocAp7 Sigma38 0 3013066 3013073 ACTATACT 3013078 3.89 good homology 0.003517517 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtcaACTATACTtttcAcgagt 3013182 3013760 F mocA mocAp8 Sigma38 0 3012945 3012952 GCTAGCCT 3012958 4.98 high homology 0.000867409 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgccGCTAGCCTggagcAgttct 3022373 3023773 F xanQ xanQp1 Sigma38 0 3022269 3022276 GCGAAAAT 3022282 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgactGCGAAAATgagatAagccg 3026546 3027034 R ygfS ygfSp1 Sigma38 0 3027062 3027069 GATATGTT 3027055 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcgcGATATGTTaactctGtttga 3026546 3027034 R ygfS ygfSp4 Sigma38 0 3027164 3027171 CCTACCCA 3027158 3.06 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaCCTACCCAgacgcAtctga 3029389 3030837 F ygfU ygfUp4 Sigma38 0 3029163 3029170 GCCAGAAT 3029176 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacatGCCAGAATgattaAtgaaa 3031087 3031635 F idi idip6 Sigma38 0 3031048 3031055 TCTATAAT 3031061 4.1 good homology 0.002822873 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattaTCTATAATgatgaGtgatc 3031087 3031635 F idi idip8 Sigma38 0 3030952 3030959 GCTACTTT 3030965 4.51 high homology 0.001712159 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgatGCTACTTTtttaaAtggtt 3031087 3031635 F idi idip9 Sigma38 0 3030857 3030864 GCTATATT 3030871 5.25 high homology 0.000593188 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcgcGCTATATTcagtctGttgtt 3031679 3033196 R lysS lysSp2 Sigma38 0 3033335 3033342 GCCAGATT 3033328 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggcaGCCAGATTcgttctTatgtc 3040511 3041170 R yqfA yqfAp1 Sigma38 0 3041363 3041370 GACACAAT 3041357 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtcaGACACAATtttatGtgatt 3040511 3041170 R yqfA yqfAp6 Sigma38 0 3041213 3041220 GTTACGCT 3041207 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctcaGTTACGCTggagaGgtata 3040511 3041170 R yqfA yqfAp7 Sigma38 0 3041383 3041390 GCTGACAT 3041376 3.45 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcattGCTGACATctatccCggtca 3040511 3041170 R yqfA yqfAp8 Sigma38 0 3041404 3041411 ACTGAACT 3041398 3.47 poor homology 0.005353525 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccctgACTGAACTgaaaaAagtca 3041684 3043123 F bglA bglAp4 Sigma38 0 3041593 3041600 GCCAGAAT 3041605 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcccaGCCAGAATgtcaTcctgg 3043180 3043923 R ygfF ygfFp1 Sigma38 0 3044042 3044049 TTTACCCT 3044035 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaataTTTACCCTcaccccGgccct 3053634 3053963 F zapA zapAp1 Sigma38 0 3053499 3053506 GATATGCT 3053511 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcatGATATGCTaccaCtttgg 3064299 3065195 R ygfI ygfIp3 Sigma38 0 3065263 3065270 CCTATCTT 3065257 2.67 poor homology 0.011678567 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcaCCTATCTTtgctcGcggtt 3064299 3065195 R ygfI ygfIp6 Sigma38 0 3065236 3065243 GATAGGCT 3065230 3.35 poor homology 0.00628242 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaagGATAGGCTgactgAaacgg 3068187 3069266 R fbaA fbaAp1 Sigma38 0 3069407 3069414 TCTAAATA 3069401 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catacTCTAAATAattcgAgttgc 3087777 3088274 F yggI yggIp2 Sigma38 0 3087761 3087768 TCTATCCT 3087774 3.83 good homology 0.003697864 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgcTCTATCCTctgccGctatg 3089156 3089887 F rsmE rsmEp2 Sigma38 0 3089072 3089079 GCTAACCT 3089085 4.66 high homology 0.001387849 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagaGCTAACCTacactAgcggg 3089156 3089887 F rsmE rsmEp5 Sigma38 0 3089077 3089084 CCTACACT 3089090 5.78 high homology 0.000205513 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctaaCCTACACTagcggGattct 3090959 3091522 F yqgE yqgEp1 Sigma38 0 3090851 3090858 CCCACCTT 3090864 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtaaCCCACCTTagcgaGaagga 3092122 3093102 R yggR yggRp1 Sigma38 0 3093138 3093145 GCCAGGTT 3093133 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgtGCCAGGTTatgcGcaata 3093120 3093824 F yggS yggSp4 Sigma38 0 3093092 3093099 TCCATATT 3093106 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttctTCCATATTcatactAagatc 3093120 3093824 F yggS yggSp5 Sigma38 0 3093068 3093075 TTTACACT 3093080 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatgcTTTACACTaaggGccaca 3093120 3093824 F yggS yggSp6 Sigma38 0 3093080 3093087 GCCACAAT 3093094 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaggGCCACAATttcttcCatatt 3111089 3111499 R yghG yghGp5 Sigma38 0 3111587 3111594 GCAACACT 3111580 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtataGCAACACTttatctAcaggc 3111089 3111499 R yghG yghGp7 Sigma38 0 3111629 3111636 ACCACACT 3111622 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatcaACCACACTgcctttTggacc 3111565 3112374 R pppA pppAp2 Sigma38 0 3112456 3112463 GCCGCGAT 3112450 3.32 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggaaaGCCGCGATtatttGcgctg 3112572 3117134 R yghJ yghJp2 Sigma38 0 3117286 3117293 GATAGACA 3117281 2.76 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agccaGATAGACAtcgtAtaggg 3112572 3117134 R yghJ yghJp3 Sigma38 0 3117260 3117267 TATAAATT 3117253 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attctTATAAATTtcacctGttttc 3112572 3117134 R yghJ yghJp4 Sigma38 0 3117343 3117350 GTTACGTT 3117337 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atataGTTACGTTgtgaaAtgttg 3117619 3119301 R glcA glcAp3 Sigma38 0 3119394 3119401 GCTGTAAA 3119388 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgttGCTGTAAAgtataAcgcct 3117619 3119301 R glcA glcAp6 Sigma38 0 3119484 3119491 GATACTCT 3119477 3.36 poor homology 0.00615802 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaacGATACTCTgcgtctGcgtgt 3117619 3119301 R glcA glcAp8 Sigma38 0 3119378 3119385 CCTATATT 3119372 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taacgCCTATATTttacaGttcag 3117619 3119301 R glcA glcAp11 Sigma38 0 3119443 3119450 GATATACT 3119438 4.11 good homology 0.002739445 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacccGATATACTtgttAtgcca 3128200 3129216 F insH insHp2 Sigma38 0 3128014 3128021 GCCACCCA 3128027 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCCACCCAcgcctGccaga 3129363 3130430 R yghQ yghQp5 Sigma38 0 3130459 3130466 GATACTTT 3130453 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcggGATACTTTttactAtcaac 3132153 3132845 F yghT yghTp12 Sigma38 0 3131918 3131925 CCTACAAT 3131930 4.99 high homology 0.000858778 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacatCCTACAATggcaAtaaca 3144472 3144759 R yghW yghWp3 Sigma38 0 3144872 3144879 GATAGGTT 3144866 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcctGATAGGTTtatctCttacg 3144472 3144759 R yghW yghWp4 Sigma38 0 3144799 3144806 CCTAAAAT 3144792 3.41 poor homology 0.00585769 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttgCCTAAAATatcgctAtatat 3144472 3144759 R yghW yghWp5 Sigma38 0 3144788 3144795 GCTATATA 3144782 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatcGCTATATAtgacaAtatat 3145919 3146959 F gpr gprp3 Sigma38 0 3145840 3145847 GCCAGACT 3145853 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtgaGCCAGACTacgggAtacgc 3145919 3146959 F gpr gprp4 Sigma38 0 3145870 3145877 GCTAAACT 3145882 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatcGCTAAACTagaaAcattg 3146999 3147493 R yqhA yqhAp1 Sigma38 0 3147582 3147589 GCGACAAA 3147576 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attatGCGACAAAggtttAacgta 3146999 3147493 R yqhA yqhAp4 Sigma38 0 3147629 3147636 GATGCGTT 3147623 3.73 good homology 0.004253556 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttctcGATGCGTTgataaGggaac 3146999 3147493 R yqhA yqhAp6 Sigma38 0 3147525 3147532 GATATACT 3147520 4.11 good homology 0.002739445 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgcGATATACTgttgCccgtt 3147684 3148568 F yghA yghAp2 Sigma38 0 3147569 3147576 TATACGTT 3147582 3.31 poor homology 0.006604527 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caacaTATACGTTaaaccTttgtc 3147684 3148568 F yghA yghAp3 Sigma38 0 3147463 3147470 CATACATT 3147476 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaagCATACATTgcattTtcaag 3147684 3148568 F yghA yghAp4 Sigma38 0 3147491 3147498 CATACATT 3147505 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttcCATACATTcctgtcGtgtag 3147684 3148568 F yghA yghAp6 Sigma38 0 3147644 3147651 TCTACCCT 3147657 5.41 high homology 0.000448321 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaacgTCTACCCTtaaagGacgtt 3155672 3156598 F yqhG yqhGp4 Sigma38 0 3155468 3155475 GCTAACAT 3155480 3.86 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggcgGCTAACATgcaaAttctc 3156649 3156906 F yqhH yqhHp1 Sigma38 0 3156449 3156456 TTTACGCT 3156462 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgtTTTACGCTgaccaAtggca 3156649 3156906 F yqhH yqhHp3 Sigma38 0 3156581 3156588 GCCAGATT 3156594 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgccGCCAGATTaaagcAatgag 3160766 3161503 R plsC plsCp3 Sigma38 0 3161588 3161595 AATACGCT 3161582 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaacAATACGCTtttccAgagag 3160766 3161503 R plsC plsCp5 Sigma38 0 3161553 3161560 CCTAACCT 3161546 3.14 poor homology 0.007828378 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatgcCCTAACCTgatttcAggtga 3161737 3163995 R parC parCp3 Sigma38 0 3164235 3164242 TCTACTAT 3164229 3.35 poor homology 0.00628242 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctaTCTACTATcagccGttaat 3161737 3163995 R parC parCp6 Sigma38 0 3164202 3164209 CCTACGTT 3164197 4.24 good homology 0.002242868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaacCCTACGTTggcgGttttc 3164133 3165740 R ygiS ygiSp1 Sigma38 0 3165803 3165810 GATAAGTT 3165797 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcgcGATAAGTTtgagcGaacaa 3164133 3165740 R ygiS ygiSp2 Sigma38 0 3165928 3165935 TCCACAAT 3165923 3.98 good homology 0.003247077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcctTCCACAATcaaaCtttta 3165873 3166268 R mqsA mqsAp4 Sigma38 0 3166327 3166334 GCCAGGTT 3166320 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacagGCCAGGTTtatcttAaaatt 3165873 3166268 R mqsA mqsAp7 Sigma38 0 3166381 3166388 CCTACTCT 3166376 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaccaCCTACTCTgatcAtacta 3167306 3167698 R ygiW ygiWp2 Sigma38 0 3167925 3167932 TCGACGCT 3167920 3.09 poor homology 0.008066787 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accagTCGACGCTaaaaCccatt 3167306 3167698 R ygiW ygiWp4 Sigma38 0 3167777 3167784 ACTAAATT 3167771 3.41 poor homology 0.0057417 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acagcACTAAATTttattTttttc 3170552 3171133 F mdaB mdaBp3 Sigma38 0 3170486 3170493 GCTAATTT 3170498 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attttGCTAATTTcaccGtaccg 3170552 3171133 F mdaB mdaBp6 Sigma38 0 3170311 3170318 GCCATATT 3170323 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaaaGCCATATTttcaAtcccc 3170552 3171133 F mdaB mdaBp8 Sigma38 0 3170456 3170463 GCTAAATT 3170469 5.25 high homology 0.000623601 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttttGCTAAATTcgcaaAagact 3171164 3171478 F ygiN ygiNp1 Sigma38 0 3171041 3171048 CCGACATT 3171053 3 poor homology 0.008738646 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgctgCCGACATTtatcGctaat 3171164 3171478 F ygiN ygiNp3 Sigma38 0 3171087 3171094 GCTATACT 3171100 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccccGCTATACTgaagaAtatcg 3171526 3173418 R parE parEp3 Sigma38 0 3173534 3173541 GCCAGACT 3173528 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgccGCCAGACTgtcatAgaagg 3171526 3173418 R parE parEp4 Sigma38 0 3173549 3173556 ACTACGCT 3173544 4.39 good homology 0.002009237 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgtACTACGCTtcctGccgcc 3180572 3181345 F zupT zupTp3 Sigma38 0 3180471 3180478 AATACGCT 3180484 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcacAATACGCTtgttcGgcgga 3180572 3181345 F zupT zupTp4 Sigma38 0 3180433 3180440 GATATCCT 3180446 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgatGATATCCTtaactAaaggt 3180572 3181345 F zupT zupTp5 Sigma38 0 3180460 3180467 GATATCCT 3180472 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attttGATATCCTcacaAtacgc 3181835 3182488 R ribB ribBp1 Sigma38 0 3182715 3182722 GCGAAATT 3182710 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgggGCGAAATTccccAccggc 3182862 3183152 F yqiC yqiCp4 Sigma38 0 3182820 3182827 ACTACAAT 3182832 4.67 high homology 0.001360368 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcgcACTACAATggcaCtcaac 3183436 3183987 F ygiL ygiLp3 Sigma38 0 3183319 3183326 GATAAACT 3183333 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaGATAAACTaattttAtaaaa 3184209 3184574 F insC insCp3 Sigma38 0 3184068 3184075 ACCACAAT 3184081 2.97 poor homology 0.008915179 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattaACCACAATaagcgAattga 3190230 3190859 F yqiJ yqiJp2 Sigma38 0 3189983 3189990 CATACCTT 3189996 2.62 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcgCATACCTTttaagGccata 3190230 3190859 F yqiJ yqiJp4 Sigma38 0 3190137 3190144 TCTAACCT 3190150 3.83 good homology 0.003697864 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttcTCTAACCTgtgttAttatt 3193342 3194775 R rfaE rfaEp3 Sigma38 0 3194991 3194998 ACGACATT 3194985 2.68 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaaaACGACATTatggaAgagca 3193342 3194775 R rfaE rfaEp4 Sigma38 0 3194949 3194956 CTTACACT 3194942 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgtgCTTACACTacgcttCgcgat 3193342 3194775 R rfaE rfaEp5 Sigma38 0 3194944 3194951 ACTACGCT 3194938 4.39 good homology 0.002009237 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttacACTACGCTtcgcgAtgaac 3194823 3197663 R glnE glnEp4 Sigma38 0 3197890 3197897 GCTACCGT 3197884 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgatcGCTACCGTgaccaGttgcc 3202716 3203333 F plsY plsYp2 Sigma38 0 3202598 3202605 AATACAAT 3202610 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctataAATACAATatccAtcacg 3207552 3208565 R gcp gcpp1 Sigma38 0 3208751 3208758 GCCAGCTT 3208745 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaacGCCAGCTTatttcAaaatg 3207552 3208565 R gcp gcpp4 Sigma38 0 3208596 3208603 CCTACACT 3208590 5.78 high homology 0.000205513 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttggtCCTACACTgcgcgGtaata 3212989 3213495 R mug mugp4 Sigma38 0 3213525 3213532 GTTATACT 3213518 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatccGTTATACTtttcctGgtgat 3213749 3214513 R yqjH yqjHp3 Sigma38 0 3214600 3214607 TCTACAAA 3214593 4.02 good homology 0.003088715 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagtTCTACAAAtcgcttGcattt 3218937 3219269 R ygjH ygjHp1 Sigma38 0 3219283 3219290 TTTACCCT 3219277 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatTTTACCCTaagggAggaag 3224256 3225689 F ygjI ygjIp3 Sigma38 0 3224227 3224234 GCTACCCT 3224239 6.24 high homology 0.000103081 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaccGCTACCCTactcAttttc 3225823 3226893 F ygjJ ygjJp6 Sigma38 0 3225652 3225659 GCCATATT 3225665 3.55 good homology 0.005143611 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agagcGCCATATTgaagcGacgcc 3231750 3232166 R higA higAp2 Sigma38 0 3232326 3232333 GATAACTT 3232320 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctctgGATAACTTcaaatAtctgg 3231750 3232166 R higA higAp3 Sigma38 0 3232312 3232319 TCTGGATA 3232305 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaataTCTGGATAagcattAtgttt 3231750 3232166 R higA higAp4 Sigma38 0 3232330 3232337 TCTGGATA 3232324 2.67 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccatcTCTGGATAacttcAaatat 3231750 3232166 R higA higAp7 Sigma38 0 3232232 3232239 GCTACATA 3232226 5.17 high homology 0.000724521 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagtGCTACATAcgtgaAgttat 3233982 3234485 F ygjP ygjPp7 Sigma38 0 3233912 3233919 GATAAAAT 3233924 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaatGATAAAATttcgAcattg 3233982 3234485 F ygjP ygjPp8 Sigma38 0 3233921 3233928 TCGACATT 3233935 3.69 good homology 0.004427147 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaattTCGACATTgcccctGaaaag 3233982 3234485 F ygjP ygjPp9 Sigma38 0 3233951 3233958 TATACCCT 3233964 3.79 good homology 0.003848776 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgagTATACCCTttttcTctttt 3234562 3235254 F ygjQ ygjQp2 Sigma38 0 3234522 3234529 CCTAAAAT 3234535 3.41 poor homology 0.00585769 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagcgCCTAAAATcgaccTccccc 3239215 3239766 R ygjV ygjVp2 Sigma38 0 3239848 3239855 GCTATAAA 3239842 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaacGCTATAAAgtcgaAatgag 3246991 3247359 F yqjC yqjCp1 Sigma38 0 3246840 3246847 GATAACTT 3246854 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttcgGATAACTTcctgttAtccga 3246991 3247359 F yqjC yqjCp2 Sigma38 0 3246759 3246766 GCTACATC 3246772 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccatgGCTACATCattgcGcagca 3246991 3247359 F yqjC yqjCp3 Sigma38 0 3246794 3246801 GCTATGCA 3246808 2.99 poor homology 0.008738646 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcagGCTATGCAgtggctGacccg 3246991 3247359 F yqjC yqjCp4 Sigma38 0 3246896 3246903 TCTATGAT 3246909 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aactgTCTATGATtaatgAggcgg 3249046 3250032 F yqjG yqjGp1 Sigma38 0 3248815 3248822 TTTACGCT 3248827 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgggcTTTACGCTgctgAcggca 3249046 3250032 F yqjG yqjGp3 Sigma38 0 3248983 3248990 GCTATACT 3248996 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacgcGCTATACTtaacgAtaaaa 3250326 3250691 F yhaH yhaHp2 Sigma38 0 3250271 3250278 TCTATTCT 3250285 2.57 poor homology 0.012778388 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcacgTCTATTCTtaatttGctgct 3250933 3251289 F yhaI yhaIp4 Sigma38 0 3250895 3250902 AATAGACT 3250909 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccggAATAGACTttcgtcActttt 3250933 3251289 F yhaI yhaIp6 Sigma38 0 3250793 3250800 TATAAATT 3250805 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttaTATAAATTacctAtaaaa 3251340 3252236 R yhaJ yhaJp6 Sigma38 0 3252366 3252373 TCCACACT 3252360 4.77 high homology 0.001268399 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcttgTCCACACTgcctgGcagtt 3251340 3252236 R yhaJ yhaJp7 Sigma38 0 3252288 3252295 GCTACATT 3252283 6.83 high homology 4.19E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggacGCTACATTgttaGccaga 3256307 3257671 R tdcG tdcGp3 Sigma38 0 3257873 3257880 GCCACCAT 3257867 3.74 good homology 0.004086771 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attttGCCACCATcaacgAagtct 3285448 3286032 F yraH yraHp2 Sigma38 0 3285255 3285262 TATACTCT 3285268 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcattTATACTCTtttgaAtacat 3290497 3291357 R rsmI rsmIp3 Sigma38 0 3291488 3291495 GCGAAAAT 3291483 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaccgGCGAAAATcaggGctgcc 3291422 3293458 F yraM yraMp4 Sigma38 0 3291284 3291291 GCCAGATT 3291296 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatccGCCAGATTgccgAttggc 3293416 3293811 F yraN yraNp1 Sigma38 0 3293334 3293341 GCCAGGTT 3293346 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatgcGCCAGGTTcaggGttttg 3296233 3296868 R yraR yraRp5 Sigma38 0 3296951 3296958 CCCACAAT 3296945 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatttCCCACAATcggggAtaatt 3297494 3297937 R yhbP yhbPp2 Sigma38 0 3298178 3298185 GCGATATT 3298171 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaacGCGATATTccgcccGtaacg 3298277 3298780 R yhbS yhbSp2 Sigma38 0 3298970 3298977 GATACGCT 3298964 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atccgGATACGCTcttctTccagc 3299507 3300502 F yhbU yhbUp3 Sigma38 0 3299447 3299454 ACTAAAAT 3299459 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttaACTAAAATcccaGttcgt 3301470 3302477 F yhbW yhbWp3 Sigma38 0 3301419 3301426 ACTACTCT 3301432 3.14 poor homology 0.007828378 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttaACTACTCTttaatGcagta 3303993 3305882 R deaD deaDp5 Sigma38 0 3306125 3306132 GATACGCA 3306119 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaccGATACGCAttgttGgaatt 3303993 3305882 R deaD deaDp6 Sigma38 0 3305976 3305983 CCTACTTT 3305970 2.98 poor homology 0.008915179 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atacaCCTACTTTgagccGgttca 3318010 3319635 R yhbX yhbXp3 Sigma38 0 3319876 3319883 GATATGTT 3319870 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atacgGATATGTTtacttCtcgat 3318010 3319635 R yhbX yhbXp7 Sigma38 0 3319822 3319829 GCTACGTT 3319817 5.76 high homology 0.000231716 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgatgGCTACGTTctgcGtaatg 3320755 3322092 R glmM glmMp2 Sigma38 0 3322116 3322123 GCCACTCT 3322111 3.28 poor homology 0.006805664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggaaGCCACTCTgtctGcaaag 3326985 3328418 F dacB dacBp1 Sigma38 0 3326893 3326900 TTTACCCT 3326905 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcatTTTACCCTgaagTtcccg 3326985 3328418 F dacB dacBp5 Sigma38 0 3326867 3326874 GCTACAAT 3326879 6.51 high homology 6.13E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtcaGCTACAATtcacAttttg 3328604 3329776 R obgE obgEp1 Sigma38 0 3329979 3329986 TTTACGCT 3329973 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cactgTTTACGCTgttttTttcag 3330884 3331141 R rpmA rpmAp3 Sigma38 0 3331378 3331385 GCGAAACT 3331372 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aactgGCGAAACTgttgaGttcgc 3331732 3332703 F ispB ispBp2 Sigma38 0 3331676 3331683 CCTAAGTT 3331690 2.66 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaacCCTAAGTTgcctttGttcac 3331732 3332703 F ispB ispBp4 Sigma38 0 3331519 3331526 GCTATAAA 3331532 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtgcGCTATAAAtattcAcaata 3331732 3332703 F ispB ispBp7 Sigma38 0 3331577 3331584 GCTACAGT 3331589 3.62 good homology 0.00484407 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caagtGCTACAGTcaatAcacga 3331732 3332703 F ispB ispBp8 Sigma38 0 3331655 3331662 CCTATATT 3331667 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcacCCTATATTcctaAccata 3332931 3333209 F sfsB sfsBp1 Sigma38 0 3332806 3332813 TATATATT 3332818 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcttTATATATTctgaAtattc 3333257 3334516 R murA murAp1 Sigma38 0 3334742 3334749 GCCACTTT 3334735 2.8 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcaGCCACTTTcaggttAttgcc 3333257 3334516 R murA murAp2 Sigma38 0 3334640 3334647 ACCGCATT 3334633 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggataACCGCATTcatgctGtgtcg 3333257 3334516 R murA murAp3 Sigma38 0 3334660 3334667 GATGGAAT 3334654 3.22 poor homology 0.007446583 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgctGATGGAATatattGcggat 3334571 3334825 R yrbA yrbAp2 Sigma38 0 3334900 3334907 GCGAGGCT 3334895 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcaGCGAGGCTttttGcttat 3334571 3334825 R yrbA yrbAp3 Sigma38 0 3334849 3334856 GCTGGTTT 3334844 2.83 poor homology 0.010254896 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttcGCTGGTTTattaActgat 3334571 3334825 R yrbA yrbAp5 Sigma38 0 3335019 3335026 GCGAAATT 3335013 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccctgGCGAAATTgtataAtttgc 3334571 3334825 R yrbA yrbAp6 Sigma38 0 3334862 3334869 TCTAAGAT 3334856 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgcTCTAAGATgtttcGctggt 3334571 3334825 R yrbA yrbAp7 Sigma38 0 3335028 3335035 TATACCCT 3335022 3.79 good homology 0.003848776 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagtgTATACCCTggcgaAattgt 3334985 3335278 R mlaB mlaBp1 Sigma38 0 3335504 3335511 GTTACCAT 3335498 2.63 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgcGTTACCATtattgAcccga 3347103 3347831 R mtgA mtgAp1 Sigma38 0 3347854 3347861 GCTGGTTT 3347848 2.83 poor homology 0.010254896 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gataaGCTGGTTTcccgcGtgctg 3347103 3347831 R mtgA mtgAp2 Sigma38 0 3347859 3347866 GATAAGCT 3347853 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcattGATAAGCTggtttCccgcg 3347103 3347831 R mtgA mtgAp5 Sigma38 0 3347867 3347874 GCGGCATT 3347861 4.11 good homology 0.002712187 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgaGCGGCATTgataaGctggt 3347103 3347831 R mtgA mtgAp6 Sigma38 0 3348031 3348038 GCTGCGTT 3348025 5.35 high homology 0.000490542 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcccGCTGCGTTtgaccAtcggt 3351143 3352072 R yhcC yhcCp3 Sigma38 0 3352115 3352122 GCTAAAAA 3352109 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgaGCTAAAAAtggcaGgcttt 3351143 3352072 R yhcC yhcCp4 Sigma38 0 3352263 3352270 CCTAAAAT 3352257 3.41 poor homology 0.00585769 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttgCCTAAAATccatcAggaga 3360134 3360808 F yhcA yhcAp5 Sigma38 0 3360040 3360047 TCTGTCTT 3360053 2.95 poor homology 0.009186686 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catggTCTGTCTTaatcaAtctca 3360134 3360808 F yhcA yhcAp8 Sigma38 0 3360023 3360030 TATGCCCT 3360036 3.38 poor homology 0.005976023 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagatTATGCCCTatgacAtggtc 3360134 3360808 F yhcA yhcAp10 Sigma38 0 3360095 3360102 TCTGCGTT 3360107 4.52 high homology 0.001628656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgttTCTGCGTTatttAtcatt 3363724 3364740 R insH insHp1 Sigma38 0 3364954 3364961 TTTACATT 3364949 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaatTTTACATTgttcAttttg 3365849 3366976 F yhcG yhcGp3 Sigma38 0 3365761 3365768 AATACGCT 3365775 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatgtAATACGCTgttcttAattgt 3365849 3366976 F yhcG yhcGp4 Sigma38 0 3365703 3365710 TATACGAT 3365716 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtttTATACGATcggttAatgtt 3371720 3372511 R nanR nanRp3 Sigma38 0 3372547 3372554 GATAGGAT 3372540 2.56 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgtGATAGGATgtcactGatgat 3371720 3372511 R nanR nanRp6 Sigma38 0 3372564 3372571 CCTACTTT 3372557 2.98 poor homology 0.008915179 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttccCCTACTTTcaatccTgtgat 3371720 3372511 R nanR nanRp11 Sigma38 0 3372647 3372654 GTTACATT 3372641 4.01 good homology 0.003119758 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgcGTTACATTaatttTtcgca 3374301 3374798 R sspB sspBp2 Sigma38 0 3374960 3374967 GCTATCTT 3374954 4.19 good homology 0.002381559 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgattGCTATCTTgctccGctgct 3375837 3376229 R rpsI rpsIp1 Sigma38 0 3376408 3376415 GCGACCTT 3376402 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacaaGCGACCTTtgaagAgatga 3375837 3376229 R rpsI rpsIp3 Sigma38 0 3376318 3376325 GCTATGTT 3376312 4.18 good homology 0.002478752 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcgtGCTATGTTccgtaAactga 3376892 3378019 R yhcM yhcMp2 Sigma38 0 3378137 3378144 GCCACTAT 3378132 2.48 poor homology 0.014122302 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attatGCCACTATaaccGttaat 3383560 3383823 F yhcN yhcNp4 Sigma38 0 3383371 3383378 ACTAGAAT 3383384 3.41 poor homology 0.005799405 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaACTAGAATtaacgAtaaat 3383879 3384151 R yhcO yhcOp2 Sigma38 0 3384332 3384339 GCTACGCA 3384327 4.57 high homology 0.001533811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaaaGCTACGCAtctgGcaagc 3383879 3384151 R yhcO yhcOp4 Sigma38 0 3384199 3384206 GCTATACT 3384193 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatgGCTATACTtagcgAtgcac 3384243 3386210 R aaeB aaeBp4 Sigma38 0 3386401 3386408 TATAGACT 3386396 3.6 good homology 0.004991594 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgacTATAGACTctaaCcttga 3384243 3386210 R aaeB aaeBp5 Sigma38 0 3386301 3386308 GCTACAGT 3386296 3.62 good homology 0.00484407 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccactGCTACAGTggtgGtcact 3384243 3386210 R aaeB aaeBp6 Sigma38 0 3386394 3386401 TCTAACCT 3386388 3.83 good homology 0.003697864 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagacTCTAACCTtgaatGggtgc 3387542 3388471 F aaeR aaeRp4 Sigma38 0 3387445 3387452 GCAACATT 3387458 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgagaGCAACATTgctgtAgattg 3387542 3388471 F aaeR aaeRp8 Sigma38 0 3387499 3387506 TCTATATT 3387512 4.42 high homology 0.001892229 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttaTCTATATTatgtgAtctaa 3388605 3390050 R tldD tldDp2 Sigma38 0 3390145 3390152 CCTACAAA 3390139 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggCCTACAAAccggaAcataa 3388605 3390050 R tldD tldDp3 Sigma38 0 3390236 3390243 CCTACAAA 3390231 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggCCTACAAAcggaAcataa 3388605 3390050 R tldD tldDp4 Sigma38 0 3390168 3390175 GCGACGCT 3390163 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCGACGCTgtgcGtctta 3388605 3390050 R tldD tldDp5 Sigma38 0 3390259 3390266 GCGACGCT 3390254 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCGACGCTgtgcGtctta 3390480 3394280 R yhdP yhdPp2 Sigma38 0 3394443 3394450 GTCACACT 3394437 2.78 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaagaGTCACACTcgctgGcggaa 3390480 3394280 R yhdP yhdPp4 Sigma38 0 3394519 3394526 TCCACCAT 3394514 2.91 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgtgTCCACCATgcttAcgact 3390480 3394280 R yhdP yhdPp5 Sigma38 0 3394486 3394493 TCTATGCT 3394480 3.82 good homology 0.003772566 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctggTCTATGCTtctccGgcagt 3399414 3401354 R csrD csrDp1 Sigma38 0 3401388 3401395 GCTAGTAT 3401383 2.92 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatttGCTAGTATgcccGcttcc 3399414 3401354 R csrD csrDp3 Sigma38 0 3401453 3401460 ACTATACT 3401447 3.89 good homology 0.003517517 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaagACTATACTcgctaAtggaa 3410643 3410822 F yhdU yhdUp3 Sigma38 0 3410609 3410616 GCCAGACT 3410622 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcctGCCAGACTtggttAaacat 3410825 3411487 R envR envRp3 Sigma38 0 3411557 3411564 TACACATT 3411551 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataaaTACACATTaggtgAtagat 3410825 3411487 R envR envRp5 Sigma38 0 3411612 3411619 TATATATT 3411607 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aataaTATATATTatttAtttaa 3410825 3411487 R envR envRp6 Sigma38 0 3411649 3411656 TATATATT 3411643 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaaaTATATATTgatgtAgtgaa 3410825 3411487 R envR envRp7 Sigma38 0 3411530 3411537 GCTATTTT 3411525 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccttcGCTATTTTctcaCtctgt 3410825 3411487 R envR envRp10 Sigma38 0 3411545 3411552 GATAGATT 3411538 3.95 good homology 0.003312673 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taggtGATAGATTaaccttCgctat 3416412 3416633 F yhdV yhdVp3 Sigma38 0 3416283 3416290 TTTACAAT 3416295 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctattTTTACAATtcacAtaatt 3416412 3416633 F yhdV yhdVp7 Sigma38 0 3416338 3416345 GATAAAAT 3416350 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccggtGATAAAATggcaTtcagc 3427788 3428045 R yrdB yrdBp3 Sigma38 0 3428170 3428177 GCGAGGCT 3428165 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagcaGCGAGGCTcaaaGcgtaa 3436453 3436671 R yhdL yhdLp2 Sigma38 0 3436702 3436709 ATTACACT 3436695 2.65 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaggATTACACTcgcgccGttaaa 3437638 3438021 R rplQ rplQp3 Sigma38 0 3438225 3438232 GCTATCCA 3438220 3 poor homology 0.008565609 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagaaGCTATCCActatAtcggt 3437638 3438021 R rplQ rplQp4 Sigma38 0 3438168 3438175 CCTAACCT 3438162 3.14 poor homology 0.007828378 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaacgCCTAACCTtggtaAaaaat 3446336 3446590 R rpsQ rpsQp3 Sigma38 0 3446821 3446828 GCGAAACT 3446816 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagcaGCGAAACTgccgAttaaa 3464271 3464747 R bfr bfrp2 Sigma38 0 3464777 3464784 TCTACTCT 3464771 4.15 good homology 0.002605841 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gccgtTCTACTCTtcaaaGagtgg 3472700 3472987 R yheL yheLp2 Sigma38 0 3473136 3473143 ACGACATT 3473130 2.68 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgtACGACATTgaacaGtgctg 3472700 3472987 R yheL yheLp3 Sigma38 0 3473161 3473168 GCCACTTT 3473154 2.8 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acattGCCACTTTtaaattGttggg 3472700 3472987 R yheL yheLp5 Sigma38 0 3473075 3473082 GACACCCT 3473069 2.92 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgcaGACACCCTttgttGtcgaa 3472700 3472987 R yheL yheLp6 Sigma38 0 3473013 3473020 ACTACGAT 3473008 3.6 good homology 0.004991594 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgccaACTACGATgttaTtttga 3475662 3475880 F slyX slyXp3 Sigma38 0 3475635 3475642 GCGACCAT 3475648 3.13 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgcgGCGACCATtcgacAaaaga 3475662 3475880 F slyX slyXp7 Sigma38 0 3475520 3475527 TCTACATA 3475533 4.34 good homology 0.002112253 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaaaTCTACATAcagacAcgccc 3475929 3476519 R slyD slyDp3 Sigma38 0 3476543 3476550 GCCACTAT 3476536 2.48 poor homology 0.014122302 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgcGCCACTATtcttccCatgct 3475929 3476519 R slyD slyDp4 Sigma38 0 3476731 3476738 GCGAAAAT 3476724 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtggcGCGAAAATaatattGatatt 3475929 3476519 R slyD slyDp7 Sigma38 0 3476555 3476562 GCTACAAT 3476550 6.51 high homology 6.13E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attccGCTACAATctgcGccact 3479311 3481224 F yheS yheSp3 Sigma38 0 3479277 3479284 GATAAGTT 3479290 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataatGATAAGTTaacatAgtctg 3479311 3481224 F yheS yheSp7 Sigma38 0 3479256 3479263 CATACATT 3479269 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgccCATACATTacattAtcata 3479311 3481224 F yheS yheSp8 Sigma38 0 3479225 3479232 GCTACCAT 3479237 5.45 high homology 0.000418012 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttggGCTACCATtgcgCccggt 3497470 3497637 F yhfL yhfLp3 Sigma38 0 3497268 3497275 TATATATT 3497281 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttttTATATATTcagcaAataaa 3497932 3499269 F frlA frlAp4 Sigma38 0 3497884 3497891 ACTGCAAA 3497897 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaatgACTGCAAActctcCcctac 3497932 3499269 F frlA frlAp6 Sigma38 0 3497800 3497807 GCGAAATT 3497813 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgtGCGAAATTttgtgAtcttc 3497932 3499269 F frlA frlAp7 Sigma38 0 3497869 3497876 GTTACCTT 3497881 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcatGTTACCTTttaaAtgact 3497932 3499269 F frlA frlAp9 Sigma38 0 3497856 3497863 CATGCATT 3497869 3.28 poor homology 0.006874063 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcatCATGCATTgtcatGttacc 3497932 3499269 F frlA frlAp14 Sigma38 0 3497820 3497827 TCCACATT 3497833 4.3 good homology 0.002154924 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttccTCCACATTacataAcatca 3497932 3499269 F frlA frlAp15 Sigma38 0 3497684 3497691 TCTGGATT 3497697 4.33 good homology 0.002133482 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcccTCTGGATTttccgAgggcg 3517487 3518725 R hofQ hofQp1 Sigma38 0 3518753 3518760 GCCACAAT 3518748 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaccGCCACAATggttGtggca 3524491 3526626 F yrfF yrfFp3 Sigma38 0 3524465 3524472 GACAGACT 3524478 2.72 poor homology 0.011220644 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcctGACAGACTaagtaAgatgg 3524491 3526626 F yrfF yrfFp4 Sigma38 0 3524395 3524402 GTTAAACT 3524407 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcaaGTTAAACTccacGcttgc 3524491 3526626 F yrfF yrfFp5 Sigma38 0 3524248 3524255 TTTACATT 3524261 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttaTTTACATTtatgtAactta 3524491 3526626 F yrfF yrfFp8 Sigma38 0 3524402 3524409 TCCACGCT 3524415 3.7 good homology 0.004339483 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaacTCCACGCTtgccgAtagcc 3524491 3526626 F yrfF yrfFp9 Sigma38 0 3524353 3524360 GCTATGAT 3524366 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtttGCTATGATcagcgGttact 3527796 3528674 F hslO hslOp1 Sigma38 0 3527741 3527748 GTTACGAT 3527753 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacctGTTACGATttaaAcacgg 3528737 3530461 R yhgE yhgEp1 Sigma38 0 3530481 3530488 CCCACCTT 3530476 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attaaCCCACCTTttgaTtctgg 3528737 3530461 R yhgE yhgEp2 Sigma38 0 3530690 3530697 GCTATTAT 3530684 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggttGCTATTATcgcagAaatag 3528737 3530461 R yhgE yhgEp3 Sigma38 0 3530492 3530499 GCGATAAT 3530485 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggatGCGATAATtaacccAccttt 3528737 3530461 R yhgE yhgEp4 Sigma38 0 3530549 3530556 ACCACGCT 3530543 2.69 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattcACCACGCTaacttTttttg 3528737 3530461 R yhgE yhgEp10 Sigma38 0 3530544 3530551 GCTAACTT 3530538 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accacGCTAACTTtttttGattat 3532538 3533890 R envZ envZp1 Sigma38 0 3534053 3534060 GATAAGCT 3534047 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccgcGATAAGCTgatgaAccttg 3532538 3533890 R envZ envZp2 Sigma38 0 3533941 3533948 GTTACATT 3533934 4.01 good homology 0.003119758 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccgcGTTACATTcagaccGtctgg 3534834 3535310 F greB greBp5 Sigma38 0 3534700 3534707 CCTAAATT 3534713 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcagCCTAAATTgttacAaagca 3534834 3535310 F greB greBp6 Sigma38 0 3534738 3534745 TATACAAT 3534752 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaagTATACAATttattcGgcgaa 3541189 3542067 F yhgA yhgAp3 Sigma38 0 3541158 3541165 GCGGCATT 3541171 4.11 good homology 0.002712187 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagtcGCGGCATTcaaacAacagg 3541189 3542067 F yhgA yhgAp5 Sigma38 0 3540977 3540984 GCTGCGTT 3540991 5.35 high homology 0.000490542 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgggcGCTGCGTTaaccttActcca 3542096 3542866 R bioH bioHp2 Sigma38 0 3542924 3542931 GCCAGCAT 3542917 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcataGCCAGCATaatcccGgtact 3542096 3542866 R bioH bioHp3 Sigma38 0 3543019 3543026 TCCACATT 3543014 4.3 good homology 0.002154924 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtaaTCCACATTgtggGcataa 3553855 3554871 R rtcA rtcAp3 Sigma38 0 3554933 3554940 GCGGCACA 3554927 2.92 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgatgGCGGCACAaagcgAtctgg 3553855 3554871 R rtcA rtcAp4 Sigma38 0 3555064 3555071 GCCGAACT 3555058 3.61 good homology 0.004892754 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatgaGCCGAACTaaagcGaaaaa 3553855 3554871 R rtcA rtcAp5 Sigma38 0 3554903 3554910 TATACCCT 3554897 3.79 good homology 0.003848776 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcTATACCCTgcgtcAggtgg 3567369 3569342 R glgX glgXp1 Sigma38 0 3569364 3569371 GCCACTAT 3569357 2.48 poor homology 0.014122302 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgctgGCCACTATctggctGgttcg 3571798 3572901 R asd asdp4 Sigma38 0 3573009 3573016 GCTATCAT 3573003 3.87 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcttcGCTATCATtgattAatttc 3576973 3577668 R yhhW yhhWp1 Sigma38 0 3577792 3577799 GCTAAGTA 3577786 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctctcGCTAAGTAagtttGatggc 3576973 3577668 R yhhW yhhWp2 Sigma38 0 3577726 3577733 TCTATCAT 3577720 3.04 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacccTCTATCATcccagGcagat 3576973 3577668 R yhhW yhhWp3 Sigma38 0 3577883 3577890 GCCAAATT 3577877 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtgcGCCAAATTacgtcAaggaa 3576973 3577668 R yhhW yhhWp4 Sigma38 0 3577703 3577710 TCCACACT 3577696 4.77 high homology 0.001268399 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgggTCCACACTaagcccAtcgaa 3577791 3578828 R yhhX yhhXp2 Sigma38 0 3578997 3579004 ACGACATT 3578992 2.68 poor homology 0.011562363 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagcACGACATTgctcAcattg 3579886 3581064 F yhhZ yhhZp2 Sigma38 0 3579698 3579705 CATACCTT 3579711 2.62 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcgaCATACCTTcctttAaggta 3579886 3581064 F yhhZ yhhZp4 Sigma38 0 3579851 3579858 GATAAAAT 3579864 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccattGATAAAATagcatGccata 3579886 3581064 F yhhZ yhhZp8 Sigma38 0 3579797 3579804 CCTACAAT 3579810 4.99 high homology 0.000858778 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atacgCCTACAATttcctGgagta 3582782 3583066 F yrhB yrhBp2 Sigma38 0 3582573 3582580 GATATCTT 3582586 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attctGATATCTTaaataAgaaaa 3582782 3583066 F yrhB yrhBp3 Sigma38 0 3582598 3582605 TCGACGTT 3582611 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccgtTCGACGTTctgaaAaagaa 3583104 3584846 R ggt ggtp4 Sigma38 0 3584940 3584947 GATATCCT 3584935 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgaaGATATCCTttaaGtttac 3584966 3585406 F yhhA yhhAp2 Sigma38 0 3584942 3584949 GATATCTT 3584955 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaagGATATCTTcagagGaggat 3584966 3585406 F yhhA yhhAp3 Sigma38 0 3584776 3584783 GCGGCGCT 3584789 3.51 good homology 0.005300257 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggcgGCGGCGCTaaaacAacttc 3584966 3585406 F yhhA yhhAp5 Sigma38 0 3584898 3584905 TCTGAATT 3584910 4.01 good homology 0.003182781 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataacTCTGAATTaatcAtcgtt 3585393 3586136 R ugpQ ugpQp5 Sigma38 0 3586299 3586306 GACACGCT 3586294 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgatgGACACGCTggagAtcctc 3585393 3586136 R ugpQ ugpQp6 Sigma38 0 3586275 3586282 GATAACCT 3586269 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgcaGATAACCTggcgcAcggac 3585393 3586136 R ugpQ ugpQp7 Sigma38 0 3586339 3586346 GCTAAGCT 3586333 4.65 high homology 0.001415886 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgcGCTAAGCTcgcagGcagaa 3596007 3596390 F yhhK yhhKp7 Sigma38 0 3595967 3595974 GCTACACT 3595981 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttcGCTACACTggttccActttt 3602416 3603012 F rsmD rsmDp4 Sigma38 0 3602311 3602318 GCTATGTA 3602323 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttaacGCTATGTAcataGcagct 3602416 3603012 F rsmD rsmDp6 Sigma38 0 3602326 3602333 GCTAAAAA 3602338 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagcaGCTAAAAAaatgAtgaaa 3602416 3603012 F rsmD rsmDp7 Sigma38 0 3602243 3602250 GCCACGTT 3602256 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaGCCACGTTtttttTctttc 3602416 3603012 F rsmD rsmDp10 Sigma38 0 3602272 3602279 ACTACACT 3602284 5.47 high homology 0.000405658 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgcgACTACACTcctcGctgtt 3603274 3603633 R yhhM yhhMp2 Sigma38 0 3603842 3603849 GCCAGGTT 3603836 2.8 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgttGCCAGGTTggcccAcgata 3603274 3603633 R yhhM yhhMp3 Sigma38 0 3603827 3603834 GATACGAT 3603820 3.82 good homology 0.00381048 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccacGATACGATgcatccAcagat 3603774 3604400 F yhhN yhhNp1 Sigma38 0 3603666 3603673 CATACCCT 3603678 3.1 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataagCATACCCTgccaGttatg 3603774 3604400 F yhhN yhhNp2 Sigma38 0 3603697 3603704 TCCACCCT 3603709 3.71 good homology 0.004296305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atccgTCCACCCTcgccActaaa 3603774 3604400 F yhhN yhhNp3 Sigma38 0 3603709 3603716 ACTAAACT 3603721 3.88 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgccACTAAACTggaaGcaaga 3606774 3607019 R sirA sirAp4 Sigma38 0 3607108 3607115 AATGCAAT 3607102 2.63 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgacAATGCAATggttaAttttc 3606774 3607019 R sirA sirAp6 Sigma38 0 3607175 3607182 GTTACCTT 3607169 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtctGTTACCTTaacatAataac 3607240 3607905 F yhhQ yhhQp2 Sigma38 0 3607078 3607085 ACTAGGTT 3607090 2.66 poor homology 0.011795939 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcaaACTAGGTTaacgAttgcg 3607240 3607905 F yhhQ yhhQp4 Sigma38 0 3607047 3607054 GCTAGTTT 3607061 3.25 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acggcGCTAGTTTacgcccTgtgag 3608539 3609756 R yhhS yhhSp1 Sigma38 0 3609933 3609940 GCCAGCTT 3609927 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgagGCCAGCTTgagcaGaatgt 3609888 3610937 F yhhT yhhTp1 Sigma38 0 3609695 3609702 GAGACAAT 3609708 2.57 poor homology 0.012778388 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctataGAGACAATgcgcaAattca 3609888 3610937 F yhhT yhhTp3 Sigma38 0 3609764 3609771 ACCACATT 3609777 3.29 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggatcACCACATTtttacAacagt 3609888 3610937 F yhhT yhhTp4 Sigma38 0 3609852 3609859 GCTACACT 3609864 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcccGCTACACTtaatAcaaaa 3610992 3611579 F acpT acpTp3 Sigma38 0 3610758 3610765 TCCACCAT 3610770 2.91 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggatgTCCACCATggtgGtattt 3610992 3611579 F acpT acpTp4 Sigma38 0 3610953 3610960 GATACGCA 3610966 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatacGATACGCActttcAttttc 3610992 3611579 F acpT acpTp6 Sigma38 0 3610948 3610955 GATACGAT 3610960 3.82 good homology 0.00381048 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caagtGATACGATacgcActttc 3610992 3611579 F acpT acpTp8 Sigma38 0 3610820 3610827 GCTACTTT 3610832 4.51 high homology 0.001712159 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggatGCTACTTTcggtGccatt 3617215 3621450 F rhsB rhsBp1 Sigma38 0 3617074 3617081 TCTAAATA 3617086 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctcTCTAAATAccctAtccga 3617215 3621450 F rhsB rhsBp2 Sigma38 0 3617111 3617118 TCTAAATA 3617125 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgtTCTAAATAtattccTaaaaa 3617215 3621450 F rhsB rhsBp4 Sigma38 0 3617078 3617085 AATACCCT 3617091 2.78 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctctaAATACCCTatccgAacctt 3622401 3623537 F yhhI yhhIp2 Sigma38 0 3622151 3622158 TATAAATT 3622164 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaaaTATAAATTtgcaaAaaatg 3623702 3624826 R yhhJ yhhJp2 Sigma38 0 3625043 3625050 GCGACACA 3625036 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcccgGCGACACAgttttcCgggat 3628991 3630613 R yhiJ yhiJp4 Sigma38 0 3630656 3630663 GATAAAAT 3630651 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cataaGATAAAATgttaActatg 3628991 3630613 R yhiJ yhiJp8 Sigma38 0 3630776 3630783 TCTACAAT 3630770 5.68 high homology 0.000315927 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgccTCTACAATctttaGggact 3632864 3633916 F yhiM yhiMp7 Sigma38 0 3632762 3632769 GCTATGCA 3632774 2.99 poor homology 0.008738646 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttatGCTATGCAtttgTcttta 3632864 3633916 F yhiM yhiMp8 Sigma38 0 3632687 3632694 GATAAATT 3632699 3.63 good homology 0.004795871 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttagGATAAATTtttaTttatc 3634231 3635433 R yhiN yhiNp2 Sigma38 0 3635465 3635472 TTTACAAT 3635460 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatcTTTACAATtcacGcccgt 3634231 3635433 R yhiN yhiNp4 Sigma38 0 3635584 3635591 TATAGACT 3635577 3.6 good homology 0.004991594 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgaaaTATAGACTttttttGatttg 3653278 3653925 R yhiD yhiDp6 Sigma38 0 3653949 3653956 GCCATCTT 3653944 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttgaGCCATCTTgctgCtcctt 3653278 3653925 R yhiD yhiDp7 Sigma38 0 3654023 3654030 TATACCTT 3654017 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttgTATACCTTcaaaaAtcaag 3667615 3669264 F treF treFp1 Sigma38 0 3667466 3667473 TATAAATT 3667479 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attttTATAAATTccattGatatt 3667615 3669264 F treF treFp7 Sigma38 0 3667560 3667567 ACTACCCT 3667573 4.4 good homology 0.001989245 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatgACTACCCTtaaagAaaagc 3669315 3669917 R yhjB yhjBp2 Sigma38 0 3669963 3669970 AATACCCT 3669956 2.78 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgggtAATACCCTtccactActtaa 3671385 3672398 F yhjD yhjDp2 Sigma38 0 3671218 3671225 GCTACCGT 3671231 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acctgGCTACCGTgccgaGccgct 3671385 3672398 F yhjD yhjDp4 Sigma38 0 3671340 3671347 ACTATACT 3671353 3.89 good homology 0.003517517 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaccgACTATACTttttaAgaatg 3672809 3674131 F yhjE yhjEp2 Sigma38 0 3672689 3672696 CCTAAACA 3672702 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actggCCTAAACAttatcCccttt 3672809 3674131 F yhjE yhjEp3 Sigma38 0 3672740 3672747 TACACATT 3672753 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgtTACACATTgaaatAtcact 3672809 3674131 F yhjE yhjEp4 Sigma38 0 3672738 3672745 GTTACACA 3672751 2.83 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatttGTTACACAttgaaAtatca 3677442 3678371 F kdgK kdgKp2 Sigma38 0 3677412 3677419 GCTAATTT 3677425 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctaacGCTAATTTtttacAgatca 3677442 3678371 F kdgK kdgKp3 Sigma38 0 3677193 3677200 GATAACCT 3677206 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgctgGATAACCTgccttAtcatc 3681653 3683641 R yhjK yhjKp1 Sigma38 0 3683798 3683805 TCTACGTA 3683793 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgcTCTACGTAcgttAttccg 3681653 3683641 R yhjK yhjKp3 Sigma38 0 3683737 3683744 GATACCTT 3683731 4.15 good homology 0.002605841 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgctGATACCTTacgccGactgg 3683723 3687196 R bcsC bcsCp2 Sigma38 0 3687311 3687318 GATAACTT 3687305 2.56 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggccGATAACTTtcccgGcagcg 3683723 3687196 R bcsC bcsCp3 Sigma38 0 3687371 3687378 GCCATGCT 3687365 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgccGCCATGCTgccctTtttac 3694020 3694208 R yhjR yhjRp9 Sigma38 0 3694423 3694430 CCTACCAT 3694418 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataaaCCTACCATtgaaAttaaa 3694481 3696052 F bcsE bcsEp3 Sigma38 0 3694406 3694413 GATAAGTT 3694418 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatctGATAAGTTttaaTttcaa 3694481 3696052 F bcsE bcsEp4 Sigma38 0 3694245 3694252 GAGACAAT 3694257 2.57 poor homology 0.012778388 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcatGAGACAATtctaAccgtg 3694481 3696052 F bcsE bcsEp7 Sigma38 0 3694355 3694362 ACTAAAAT 3694368 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaagACTAAAATcacacGtcttg 3694481 3696052 F bcsE bcsEp12 Sigma38 0 3694380 3694387 TCTAAATT 3694393 4.42 high homology 0.001930454 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacctTCTAAATTgattcAcatgc 3698586 3699857 F yhjV yhjVp2 Sigma38 0 3698412 3698419 TCCAGACT 3698424 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgacTCCAGACTggtaGtgaaa 3699887 3700891 R dppF dppFp2 Sigma38 0 3701094 3701101 GCCAGAAT 3701087 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgctGCCAGAATttgctcAggaca 3708822 3710030 R yhjX yhjXp3 Sigma38 0 3710263 3710270 GCCAGATT 3710257 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttagcGCCAGATTttaacGtaaca 3708822 3710030 R yhjX yhjXp4 Sigma38 0 3710197 3710204 GCTAACTT 3710191 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgggtGCTAACTTaccaaAtaata 3710259 3710957 R yhjY yhjYp3 Sigma38 0 3711097 3711104 GCTATGTA 3711092 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccctcGCTATGTAcccgAtcgta 3710259 3710957 R yhjY yhjYp5 Sigma38 0 3711011 3711018 GATATCCT 3711006 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcccGATATCCTtcatAcaatg 3710259 3710957 R yhjY yhjYp6 Sigma38 0 3711112 3711119 TCCATACT 3711105 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgtTCCATACTttccctCgctat 3710259 3710957 R yhjY yhjYp7 Sigma38 0 3711002 3711009 CATACAAT 3710997 3.37 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tccttCATACAATgacaAtaata 3710259 3710957 R yhjY yhjYp11 Sigma38 0 3711023 3711030 GCTACTAT 3711017 4.18 good homology 0.002454088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaggGCTACTATgcccgAtatcc 3711115 3711678 F tag tagp1 Sigma38 0 3710902 3710909 ACCACGCT 3710915 2.69 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgattACCACGCTcgccaGcaggc 3712084 3714417 R bisC bisCp5 Sigma38 0 3714434 3714441 TCTAACCT 3714428 3.83 good homology 0.003697864 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atacaTCTAACCTttcagGagtct 3714570 3715229 F yiaD yiaDp5 Sigma38 0 3714328 3714335 GCTAAACA 3714342 4.06 good homology 0.002967605 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcgaGCTAAACAcggtttCgccgt 3718471 3718623 R hokA hokAp2 Sigma38 0 3718810 3718817 CCTGGGTT 3718804 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgaCCTGGGTTcggggGacacc 3718471 3718623 R hokA hokAp3 Sigma38 0 3718815 3718822 CCTGACCT 3718808 2.73 poor homology 0.011220644 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catgtCCTGACCTgggttcGgggga 3718703 3719224 F insJ insJp6 Sigma38 0 3718490 3718497 GCTAAAAA 3718502 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcagGCTAAAAAcgccGccagc 3718703 3719224 F insJ insJp8 Sigma38 0 3718606 3718613 TCTATATT 3718619 4.42 high homology 0.001892229 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtaaTCTATATTtctgcGgcatt 3720351 3722420 R glyS glySp1 Sigma38 0 3722609 3722616 GCCAGCCT 3722604 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgctGCCAGCCTacgaGcgtat 3720351 3722420 R glyS glySp3 Sigma38 0 3722475 3722482 ACTACGCT 3722470 4.39 good homology 0.002009237 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcatACTACGCTtcccGtgaag 3720351 3722420 R glyS glySp4 Sigma38 0 3722523 3722530 GCTACATT 3722518 6.83 high homology 4.19E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagcGCTACATTctgcGcattc 3723436 3723735 R ysaB ysaBp3 Sigma38 0 3723782 3723789 GCCACTAT 3723777 2.48 poor homology 0.014122302 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcaGCCACTATaccgAtataa 3723910 3724905 F wecH wecHp5 Sigma38 0 3723791 3723798 GATATCTT 3723803 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctGATATCTTacgaAtttcc 3725430 3725771 R yiaB yiaBp3 Sigma38 0 3725893 3725900 TCTATATA 3725887 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcacaTCTATATAtctcaGtaatt 3734376 3735200 R bax baxp6 Sigma38 0 3735280 3735287 GCTATTTT 3735275 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgacaGCTATTTTtgatAtgatt 3734376 3735200 R bax baxp8 Sigma38 0 3735369 3735376 CCCACATT 3735364 3.61 good homology 0.004892754 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaccCCCACATTttctGcgatt 3749151 3749891 R yiaT yiaTp2 Sigma38 0 3749981 3749988 TATATATT 3749975 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatttTATATATTactatAtaaat 3750015 3750989 F yiaU yiaUp10 Sigma38 0 3749866 3749873 GCCACAAT 3749879 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ataacGCCACAATattgcGattaa 3750986 3752122 R yiaV yiaVp4 Sigma38 0 3752249 3752256 GCCACGCT 3752243 4.53 high homology 0.001580522 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttggGCCACGCTttaccGcccgg 3754699 3755850 R yiaY yiaYp3 Sigma38 0 3755957 3755964 AATACAAT 3755951 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taatgAATACAATgtgctTtttat 3754699 3755850 R yiaY yiaYp5 Sigma38 0 3755865 3755872 TTTACACT 3755859 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctttTTTACACTttcagGagtgt 3756040 3757884 R selB selBp1 Sigma38 0 3757925 3757932 TTTACGCT 3757919 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctggaTTTACGCTgccttGaagat 3756040 3757884 R selB selBp4 Sigma38 0 3758010 3758017 GCCACCTT 3758004 4.07 good homology 0.002938077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggtaGCCACCTTgagtcAttagc 3766200 3766661 F yibG yibGp3 Sigma38 0 3766184 3766191 GATAGGTT 3766196 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tataaGATAGGTTgtagAtgtat 3766200 3766661 F yibG yibGp4 Sigma38 0 3765982 3765989 GACACGCT 3765994 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacctGACACGCTatggAcgtgg 3768266 3769402 R yibH yibHp1 Sigma38 0 3769418 3769425 TCCACGTT 3769412 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actatTCCACGTTcccggAgatct 3768266 3769402 R yibH yibHp2 Sigma38 0 3769565 3769572 GCGACGCT 3769559 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctggGCGACGCTctatcAaccgg 3774194 3774403 R yibT yibTp4 Sigma38 0 3774449 3774456 ACTAAAAT 3774443 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctaaACTAAAATtggcgGccgcg 3774194 3774403 R yibT yibTp9 Sigma38 0 3774454 3774461 CCTAAACT 3774447 4.2 good homology 0.002334401 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggaaCCTAAACTaaaattGgcggc 3774688 3775050 F yibL yibLp2 Sigma38 0 3774658 3774665 TATAAATT 3774672 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggggcTATAAATTtatcttTatcag 3774688 3775050 F yibL yibLp3 Sigma38 0 3774538 3774545 TATAGATT 3774551 3.12 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcTATAGATTtcttaAttaat 3774688 3775050 F yibL yibLp4 Sigma38 0 3774656 3774663 GCTATAAA 3774668 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagggGCTATAAAtttaTcttta 3779238 3779711 F trmL trmLp1 Sigma38 0 3779208 3779215 GCTATCCT 3779222 4.66 high homology 0.00137404 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttctGCTATCCTgcccccGcacta 3780665 3781684 R gpsA gpsAp3 Sigma38 0 3781784 3781791 GGTACATT 3781778 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccgcGGTACATTcccgcAactga 3780665 3781684 R gpsA gpsAp4 Sigma38 0 3781903 3781910 GCGGTATT 3781896 2.53 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaggGCGGTATTttctccAtcgcg 3780665 3781684 R gpsA gpsAp7 Sigma38 0 3781745 3781752 GATGCGCT 3781740 4.2 good homology 0.002334401 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttcGATGCGCTgttcAtgaac 3782607 3783038 R yibN yibNp3 Sigma38 0 3783161 3783168 TTTACGCT 3783155 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccagaTTTACGCTtttttTtcgtc 3782607 3783038 R yibN yibNp6 Sigma38 0 3783219 3783226 GATAAAAT 3783212 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatcGATAAAATagcctcTgaaga 3782607 3783038 R yibN yibNp8 Sigma38 0 3783167 3783174 GCCAGATT 3783162 3.87 good homology 0.003552868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgatGCCAGATTtacgCttttt 3790849 3791706 R yibB yibBp3 Sigma38 0 3791737 3791744 GATATAAT 3791731 3.31 poor homology 0.006670903 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttatGATATAATtctttTtttat 3790849 3791706 R yibB yibBp7 Sigma38 0 3791759 3791766 TATACATT 3791753 4.38 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacagTATACATTctattAatatt 3796262 3797335 R waaU waaUp3 Sigma38 0 3797350 3797357 ACTAAAAT 3797344 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgaaACTAAAATaatatGgtata 3813150 3813791 R pyrE pyrEp3 Sigma38 0 3813927 3813934 GCTACTCA 3813922 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaagaGCTACTCAtcttGttggc 3816897 3817514 F yicG yicGp2 Sigma38 0 3816870 3816877 GCCAGACA 3816884 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accctGCCAGACAgattttTaggga 3816897 3817514 F yicG yicGp4 Sigma38 0 3816683 3816690 GCTAAATA 3816695 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caatgGCTAAATAttgcAccttt 3816897 3817514 F yicG yicGp7 Sigma38 0 3816862 3816869 GCTACCCT 3816875 6.24 high homology 0.000103081 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaatcGCTACCCTgccagAcagat 3817511 3819193 R ligB ligBp3 Sigma38 0 3819410 3819417 CCTACATA 3819405 3.65 good homology 0.004700906 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaagCCTACATAcgagCttatt 3825483 3826688 R gltS gltSp2 Sigma38 0 3826884 3826891 TCTAAATA 3826878 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctcaTCTAAATAtttaaAtgaga 3825483 3826688 R gltS gltSp5 Sigma38 0 3826698 3826705 GATACAAA 3826692 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgcgGATACAAAggagtAactat 3826968 3828359 F xanP xanPp3 Sigma38 0 3826930 3826937 GCTAAAAT 3826942 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtcaGCTAAAATgcccGctttg 3830242 3832560 R yicI yicIp3 Sigma38 0 3832748 3832755 GCCACGAT 3832743 3.74 good homology 0.004127844 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acagcGCCACGATtagcAtcatt 3834976 3836160 F setC setCp3 Sigma38 0 3834792 3834799 TATAAATT 3834805 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taataTATAAATTcggtaAttaat 3834976 3836160 F setC setCp4 Sigma38 0 3834906 3834913 AATACAAT 3834918 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcttAATACAATactcAttcga 3834976 3836160 F setC setCp5 Sigma38 0 3834779 3834786 ACTATAAT 3834791 3.09 poor homology 0.008066787 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gccttACTATAATtaatAtataa 3834976 3836160 F setC setCp6 Sigma38 0 3834848 3834855 CCTATAAT 3834861 3.41 poor homology 0.005799405 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctggcCCTATAATattgcGctagc 3834976 3836160 F setC setCp7 Sigma38 0 3834887 3834894 GCGATACT 3834900 3.41 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatcaGCGATACTcaaaaAttctt 3834976 3836160 F setC setCp11 Sigma38 0 3834861 3834868 GCTAGCAT 3834874 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgcGCTAGCATtgcttTctggt 3836271 3837194 F yicL yicLp3 Sigma38 0 3836204 3836211 GCCATCCT 3836216 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acagaGCCATCCTcgccAttttt 3836271 3837194 F yicL yicLp6 Sigma38 0 3836222 3836229 GCTATCAT 3836234 3.87 good homology 0.003588575 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCTATCATgcctGcatac 3836271 3837194 F yicL yicLp8 Sigma38 0 3836081 3836088 GCTACCAT 3836094 5.45 high homology 0.000418012 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctggaGCTACCATgcgttGttctg 3838238 3838531 F yicS yicSp3 Sigma38 0 3838213 3838220 TACACATT 3838226 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgaTACACATTtgtaaAaggtt 3838238 3838531 F yicS yicSp8 Sigma38 0 3838211 3838218 GATACACA 3838224 4.02 good homology 0.003027555 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cattcGATACACAtttgtAaaagg 3838238 3838531 F yicS yicSp9 Sigma38 0 3838191 3838198 ACTACACT 3838203 5.47 high homology 0.000405658 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcaaACTACACTtatgCttcat 3840478 3841812 R yicO yicOp8 Sigma38 0 3841924 3841931 GCGAGATT 3841918 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgtcGCGAGATTattaaAgaata 3841987 3843753 F ade adep3 Sigma38 0 3841964 3841971 GATAAAAT 3841976 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaattGATAAAATcaaaAtgaga 3841987 3843753 F ade adep4 Sigma38 0 3841930 3841937 GCGACGTT 3841943 3.45 poor homology 0.005516564 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctcGCGACGTTtctttAtgata 3845328 3846647 R uhpC uhpCp2 Sigma38 0 3846711 3846718 TACACATT 3846706 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cacatTACACATTtcctGtctgc 3854438 3854887 F yidI yidIp2 Sigma38 0 3854404 3854411 GATATGCT 3854418 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcctGATATGCTtttgccAtccgc 3854438 3854887 F yidI yidIp3 Sigma38 0 3854359 3854366 TCTACCTT 3854372 4.94 high homology 0.000921047 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgcTCTACCTTtagcgGttttt 3854934 3856427 R yidJ yidJp2 Sigma38 0 3856553 3856560 GCTACGGT 3856548 2.55 poor homology 0.013167547 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggcgGCTACGGTacgcGctggt 3861922 3862638 F yidP yidPp2 Sigma38 0 3861777 3861784 TCTACGTT 3861790 4.93 high homology 0.000939653 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agagaTCTACGTTttcgcGaaaaa 3862635 3864296 R yidE yidEp2 Sigma38 0 3864489 3864496 GCTAACTA 3864484 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaataGCTAACTAgctaTtctct 3862635 3864296 R yidE yidEp4 Sigma38 0 3864335 3864342 GCCATAAT 3864329 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attcaGCCATAATccgtaGcaatt 3862635 3864296 R yidE yidEp5 Sigma38 0 3864481 3864488 GCTATTCT 3864476 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aactaGCTATTCTctttGccccg 3866085 3867332 R yidR yidRp3 Sigma38 0 3867506 3867513 ACCACACT 3867501 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagtACCACACTggtgCttttt 3866085 3867332 R yidR yidRp4 Sigma38 0 3867460 3867467 GCTAACTT 3867455 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcctGCTAACTTtcgtGccaac 3867400 3868464 F cbrA cbrAp3 Sigma38 0 3867347 3867354 ACTTCACT 3867360 3.14 poor homology 0.007828378 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caaggACTTCACTttcagAcaata 3867400 3868464 F cbrA cbrAp4 Sigma38 0 3867311 3867318 GATACAAA 3867323 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcctGATACAAAacggGtcccg 3873461 3874117 F yidX yidXp6 Sigma38 0 3873213 3873220 TCTACTTT 3873226 3.68 good homology 0.004561973 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcttcTCTACTTTaccccGatcga 3873461 3874117 F yidX yidXp7 Sigma38 0 3873397 3873404 GCTAAACA 3873410 4.06 good homology 0.002967605 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggcGCTAAACAggaggGaaaga 3873461 3874117 F yidX yidXp8 Sigma38 0 3873317 3873324 ACTACAAT 3873329 4.67 high homology 0.001360368 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttgtACTACAATttagAtcaca 3874163 3874975 R yidA yidAp2 Sigma38 0 3875033 3875040 GTTGTACT 3875026 2.5 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgggtGTTGTACTgattttTgagcg 3874163 3874975 R yidA yidAp5 Sigma38 0 3875087 3875094 GCTAAGCA 3875081 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttccGCTAAGCAaaaagGgagca 3874163 3874975 R yidA yidAp7 Sigma38 0 3875131 3875138 TCTGCTTT 3875125 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgaTCTGCTTTccgcaGgcatg 3874163 3874975 R yidA yidAp9 Sigma38 0 3875178 3875185 GATGCGCT 3875171 4.2 good homology 0.002334401 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttattGATGCGCTctcaccGcaagg 3875090 3875488 R yidB yidBp2 Sigma38 0 3875716 3875723 GCTAACCA 3875710 3 poor homology 0.008651695 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atggcGCTAACCAtgcgaGcgtgc 3875090 3875488 R yidB yidBp5 Sigma38 0 3875526 3875533 TCTATACT 3875520 4.9 high homology 0.001038477 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaaaTCTATACTttttgGgtcaa 3875090 3875488 R yidB yidBp6 Sigma38 0 3875690 3875697 GCTACGCT 3875684 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgcGCTACGCTtatcaGgccta 3884851 3886215 F mnmE mnmEp3 Sigma38 0 3884827 3884834 GCCACACA 3884840 3.94 good homology 0.003345965 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catccGCCACACAaagcaAcagga 3884851 3886215 F mnmE mnmEp4 Sigma38 0 3884760 3884767 GCTAAAAT 3884772 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcGCTAAAATaaggGcggtc 3889638 3890813 F mdtL mdtLp3 Sigma38 0 3889492 3889499 CCTAAATT 3889505 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgttaCCTAAATTtggctAaatcc 3890788 3891747 F yidZ yidZp1 Sigma38 0 3890622 3890629 TCGACCTT 3890634 2.62 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccagcTCGACCTTaggtAttgcg 3893295 3894632 R purP purPp3 Sigma38 0 3894669 3894676 TATACGAT 3894664 2.99 poor homology 0.008826471 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttggTATACGATagcgAcggat 3894797 3895462 F yieH yieHp2 Sigma38 0 3894772 3894779 GTTAAACT 3894785 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaacGTTAAACTgattaAaaagg 3894797 3895462 F yieH yieHp3 Sigma38 0 3894761 3894768 TCTACGAA 3894775 2.95 poor homology 0.009186686 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcggcTCTACGAAaacgttAaactg 3894797 3895462 F yieH yieHp7 Sigma38 0 3894684 3894691 GCGACAAT 3894696 4.2 good homology 0.002357862 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaatGCGACAATaggcGcgttt 3904876 3905601 R phoU phoUp1 Sigma38 0 3905832 3905839 TCGACCCT 3905825 3.1 poor homology 0.007986521 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgcTCGACCCTatctctAccggg 3909862 3911691 R glmS glmSp1 Sigma38 0 3911922 3911929 GCGAAAAT 3911916 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtcgGCGAAAATgcattAgctat 3921767 3923656 R mnmG mnmGp4 Sigma38 0 3923775 3923782 TCTAAATA 3923769 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agatcTCTAAATAaatagAtcttc 3926175 3927626 R viaA viaAp2 Sigma38 0 3927663 3927670 GCCAGCCT 3927657 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgaaGCCAGCCTacaggAtgtcg 3937208 3938635 R hsrA hsrAp1 Sigma38 0 3938766 3938773 GCGACACA 3938760 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taccaGCGACACAgtgatAaagct 3937208 3938635 R hsrA hsrAp3 Sigma38 0 3938725 3938732 GATGCGAT 3938719 3.4 poor homology 0.00585769 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtcGATGCGATtatccAaagcg 3937208 3938635 R hsrA hsrAp5 Sigma38 0 3938698 3938705 GCGGCATT 3938693 4.11 good homology 0.002712187 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgacGCGGCATTtaaaGcttgt 3937208 3938635 R hsrA hsrAp7 Sigma38 0 3938672 3938679 GCTACGCT 3938666 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgctGCTACGCTcacctGataag 3945151 3945990 R hdfR hdfRp2 Sigma38 0 3946106 3946113 GCCATCCT 3946101 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttccGCCATCCTgcacGctcct 3945151 3945990 R hdfR hdfRp3 Sigma38 0 3946051 3946058 GTTACGCT 3946045 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tattaGTTACGCTtgacaGagtgt 3946109 3946447 F yifE yifEp2 Sigma38 0 3946037 3946044 TTTACACT 3946050 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgtTTTACACTctgtcAagcgt 3946109 3946447 F yifE yifEp3 Sigma38 0 3945952 3945959 GCTAACTT 3945965 4.19 good homology 0.002405494 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttcgGCTAACTTccaggAaagtt 3946472 3947992 R yifB yifBp1 Sigma38 0 3948023 3948030 GATATCTT 3948018 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcagcGATATCTTatgcAcataa 3946472 3947992 R yifB yifBp3 Sigma38 0 3948225 3948232 TATAAATT 3948220 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcaaTATAAATTgttgTttttt 3946472 3947992 R yifB yifBp5 Sigma38 0 3948056 3948063 ACTAAAAT 3948050 3.09 poor homology 0.00814786 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagccACTAAAATtcacgAattag 3962388 3963653 R rhlB rhlBp3 Sigma38 0 3963691 3963698 GATACGCT 3963685 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caccgGATACGCTttcgtAaagca 3978910 3980295 F yifK yifKp1 Sigma38 0 3978689 3978696 TTTACGCT 3978703 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttaTTTACGCTggcactAcaccg 3978910 3980295 F yifK yifKp3 Sigma38 0 3978841 3978848 GCAACACT 3978853 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catttGCAACACTcgatGtaccc 3982375 3984030 R aslA aslAp6 Sigma38 0 3984228 3984235 GATATAAT 3984221 3.31 poor homology 0.006670903 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacgcGATATAATaaacctGcctta 3984709 3985905 R hemY hemYp1 Sigma38 0 3986136 3986143 ACTACGAT 3986131 3.6 good homology 0.004991594 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcttACTACGATactgAtgatg 3991762 3992082 R cyaY cyaYp3 Sigma38 0 3992204 3992211 GCTACACA 3992198 5.65 high homology 0.00032882 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctttcGCTACACAgagacAtcatt 3991762 3992082 R cyaY cyaYp4 Sigma38 0 3992113 3992120 GCTATACT 3992106 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgccGCTATACTgccgccAtcact 3998315 3999079 R yigE yigEp2 Sigma38 0 3999297 3999304 GATAGCCT 3999291 3.36 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaggGATAGCCTtaggaGttgat 4000442 4000822 R yigF yigFp1 Sigma38 0 4000978 4000985 GGTACATT 4000973 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGGTACATTagcaGtatat 4000442 4000822 R yigF yigFp2 Sigma38 0 4001001 4001008 TCTATATA 4000996 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttcaTCTATATAaaaaCttatg 4000442 4000822 R yigF yigFp3 Sigma38 0 4000954 4000961 TCTATCAT 4000949 3.04 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcatcTCTATCATcacaAtgata 4007193 4008215 F pldB pldBp2 Sigma38 0 4007116 4007123 AATACGCT 4007130 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gccacAATACGCTactgtcGcagcg 4007193 4008215 F pldB pldBp3 Sigma38 0 4007149 4007156 GCTAAAAA 4007162 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcacGCTAAAAAaaacgAtttta 4007193 4008215 F pldB pldBp5 Sigma38 0 4007111 4007118 GCCACAAT 4007124 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgtGCCACAATacgctActgtc 4009099 4009998 F yigM yigMp3 Sigma38 0 4009061 4009068 GCTACAAT 4009073 6.51 high homology 6.13E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttcGCTACAATggatAcccgt 4016878 4017633 F ubiE ubiEp1 Sigma38 0 4016653 4016660 GCGAGATT 4016666 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaacGCGAGATTaatccGgattt 4016878 4017633 F ubiE ubiEp3 Sigma38 0 4016837 4016844 GTTACACT 4016850 4.49 high homology 0.001746747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatctGTTACACTtctggAacaat 4019968 4020237 F tatA tatAp4 Sigma38 0 4019767 4019774 GCTACGTT 4019781 5.76 high homology 0.000231716 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttggcGCTACGTTagtattAagtgg 4022356 4022844 R rfaH rfaHp6 Sigma38 0 4023078 4023085 GATACGTT 4023073 4.14 good homology 0.002658482 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcgtGATACGTTttagCtcacc 4022356 4022844 R rfaH rfaHp7 Sigma38 0 4022875 4022882 GCTATCCT 4022870 4.66 high homology 0.00137404 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttttGCTATCCTtgcgCcccga 4023011 4024504 F ubiD ubiDp3 Sigma38 0 4022889 4022896 TTTACGCT 4022902 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaagcTTTACGCTaagttAattat 4023011 4024504 F ubiD ubiDp5 Sigma38 0 4022942 4022949 GCTAATTT 4022955 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcacGCTAATTTaacaaAtttac 4023011 4024504 F ubiD ubiDp7 Sigma38 0 4022894 4022901 GCTAAGTT 4022906 4.18 good homology 0.002478752 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttacGCTAAGTTaattAtattc 4025632 4026795 R fadA fadAp2 Sigma38 0 4026850 4026857 ACTATCCT 4026843 2.82 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence accgtACTATCCTccggttGagcca 4025632 4026795 R fadA fadAp3 Sigma38 0 4026962 4026969 GACACCCT 4026956 2.92 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggctgGACACCCTcggtaGcgcaa 4038929 4039456 R mobB mobBp2 Sigma38 0 4039685 4039692 GCCAGGCT 4039679 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tagcaGCCAGGCTtaatcAtcagc 4042222 4043652 F yihF yihFp5 Sigma38 0 4042132 4042139 AATACATT 4042145 3.37 poor homology 0.006036083 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atataAATACATTctgatAatgca 4048156 4048788 R yihA yihAp4 Sigma38 0 4048844 4048851 TCCGCCTT 4048838 2.82 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaTCCGCCTTttattAtggtt 4048156 4048788 R yihA yihAp5 Sigma38 0 4048922 4048929 TCTGCTAT 4048916 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcTCTGCTATttcgcAtaaag 4048156 4048788 R yihA yihAp6 Sigma38 0 4048899 4048906 TCGGCAAT 4048893 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gactaTCGGCAATgtctcAcaaag 4048156 4048788 R yihA yihAp8 Sigma38 0 4048814 4048821 GCCACAAA 4048808 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taatcGCCACAAAgctttGactga 4051892 4053301 R glnG glnGp4 Sigma38 0 4053464 4053471 GATACGCT 4053458 4.61 high homology 0.001459006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcagGATACGCTgttttAcccga 4056430 4058253 F typA typAp4 Sigma38 0 4056209 4056216 GCTGCACC 4056222 2.82 poor homology 0.010462059 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaggGCTGCACCacgatGtgaat 4056430 4058253 F typA typAp5 Sigma38 0 4056244 4056251 GCTTCAAT 4056256 4.18 good homology 0.002454088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atagtGCTTCAATggaaAcatta 4056430 4058253 F typA typAp7 Sigma38 0 4056331 4056338 TCTGCAAT 4056343 5.27 high homology 0.000564257 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggacTCTGCAATacttGtttgc 4061626 4062318 R ompL ompLp6 Sigma38 0 4062483 4062490 TACACACT 4062477 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctttTACACACTcaatgAaaaac 4061626 4062318 R ompL ompLp7 Sigma38 0 4062336 4062343 CCTACGTT 4062330 4.24 good homology 0.002242868 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcctcCCTACGTTtaaaaAatgga 4062386 4063789 R yihO yihOp2 Sigma38 0 4063943 4063950 TCTACCCA 4063937 3.75 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttcaTCTACCCAagcgcActggc 4065263 4067299 R yihQ yihQp5 Sigma38 0 4067439 4067446 GCAACATT 4067434 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaagGCAACATTatgtAtcttc 4068538 4069779 R yihS yihSp1 Sigma38 0 4069793 4069800 GCTAAGAT 4069788 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgccGCTAAGATgaggAtaaaa 4077320 4077532 F yiiE yiiEp3 Sigma38 0 4077182 4077189 GCAACACT 4077196 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caactGCAACACTcttattAtttct 4077320 4077532 F yiiE yiiEp4 Sigma38 0 4077278 4077285 CATACATT 4077291 3.69 good homology 0.00447164 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgcaCATACATTaatgaGtaata 4084039 4084872 F fdhD fdhDp3 Sigma38 0 4083947 4083954 TCCAGAAT 4083961 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaggTCCAGAATtggctcAatttc 4084039 4084872 F fdhD fdhDp4 Sigma38 0 4083880 4083887 TTTACATT 4083893 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcccaTTTACATTcgcttGctgcg 4084039 4084872 F fdhD fdhDp6 Sigma38 0 4083861 4083868 TCGACATT 4083874 3.69 good homology 0.004427147 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgttTCGACATTgtcacGtccca 4085025 4086080 F yiiG yiiGp3 Sigma38 0 4085001 4085008 TCTATATA 4085014 2.76 poor homology 0.01099846 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcttaTCTATATAtttatAaggca 4085025 4086080 F yiiG yiiGp5 Sigma38 0 4085003 4085010 TATATATT 4085016 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcTATATATTtataaGgcaat 4086130 4087878 R frvR frvRp2 Sigma38 0 4088092 4088099 TCCACCAT 4088087 2.91 poor homology 0.009561602 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatttTCCACCATgaaaAccggt 4099713 4100696 F kdgT kdgTp3 Sigma38 0 4099631 4099638 TCTATCTT 4099645 3.36 poor homology 0.00615802 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaatgTCTATCTTcgtttcCatcaa 4100845 4101519 F yiiM yiiMp2 Sigma38 0 4100664 4100671 GCGAAAAT 4100676 2.61 poor homology 0.01227734 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gagcaGCGAAAATcgaaAtttta 4101625 4102998 R cpxA cpxAp3 Sigma38 0 4103203 4103210 TTTACCCT 4103197 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgagTTTACCCTgctctAtttgc 4101625 4102998 R cpxA cpxAp4 Sigma38 0 4103093 4103100 TATGCACA 4103087 2.78 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgaTATGCACAtttccAacctg 4101625 4102998 R cpxA cpxAp5 Sigma38 0 4103198 4103205 CCTGCTCT 4103193 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttacCCTGCTCTatttGctggc 4104492 4105394 F fieF fieFp2 Sigma38 0 4104458 4104465 GTTATACT 4104472 2.91 poor homology 0.009657698 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttccGTTATACTagcgtcAgttga 4109638 4110237 R yiiQ yiiQp5 Sigma38 0 4110298 4110305 TCTACCCT 4110293 5.41 high homology 0.000448321 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggatTCTACCCTtttgAcaagg 4110338 4110778 F yiiR yiiRp2 Sigma38 0 4110088 4110095 TCGAAACT 4110101 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcttcTCGAAACTggctgAtggag 4112592 4113602 R glpX glpXp2 Sigma38 0 4113634 4113641 GCTACACT 4113629 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgtGCTACACTtcgcGccatt 4116538 4116783 F zapB zapBp3 Sigma38 0 4116447 4116454 GCTAACTA 4116459 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcggaGCTAACTAaagtGcgctc 4116538 4116783 F zapB zapBp6 Sigma38 0 4116435 4116442 CATACAAT 4116447 3.37 poor homology 0.006096747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcttCATACAATcggaGctaac 4118439 4119770 R hslU hslUp5 Sigma38 0 4119834 4119841 GCGACATT 4119829 4.52 high homology 0.001612451 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcagGCGACATTtgcaTctata 4118439 4119770 R hslU hslUp6 Sigma38 0 4119786 4119793 GCTACAAA 4119780 4.85 high homology 0.001136275 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attaaGCTACAAAgcgtaAggatc 4122635 4124833 R priA priAp1 Sigma38 0 4124984 4124991 GCCAGACA 4124979 2.68 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctaacGCCAGACAccacGcgatg 4122635 4124833 R priA priAp3 Sigma38 0 4124955 4124962 GCTTCAAT 4124948 4.18 good homology 0.002454088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtataGCTTCAATacgatcAtttcg 4122635 4124833 R priA priAp4 Sigma38 0 4124887 4124894 TCCGCACT 4124881 4.36 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgaTCCGCACTcttctAcggca 4125309 4125917 R yiiX yiiXp2 Sigma38 0 4126055 4126062 GCTACGCT 4126049 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgcGCTACGCTtatcaGgccta 4134131 4135036 F yijE yijEp4 Sigma38 0 4134114 4134121 TACACACT 4134127 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaacTACACACTggatcTctcat 4134131 4135036 F yijE yijEp6 Sigma38 0 4134112 4134119 ACTACACA 4134124 3.81 good homology 0.00381048 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgaaaACTACACActggAtctct 4135063 4135680 R yijF yijFp2 Sigma38 0 4135780 4135787 CCCACGTT 4135774 2.53 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaactCCCACGTTgttcaGgaatt 4135063 4135680 R yijF yijFp3 Sigma38 0 4135878 4135885 CCTACGCA 4135871 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggCCTACGCAatctctGcaata 4135063 4135680 R yijF yijFp6 Sigma38 0 4135893 4135900 GCTACGCT 4135887 6.24 high homology 0.000111666 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatgcGCTACGCTtatcaGgccta 4135955 4137058 R gldA gldAp2 Sigma38 0 4137232 4137239 GCCAGCTT 4137227 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcaGCCAGCTTtaaaAcgccg 4135955 4137058 R gldA gldAp3 Sigma38 0 4137096 4137103 ACTGGAAT 4137090 3 poor homology 0.008738646 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acacgACTGGAATgccgcAtttgg 4135955 4137058 R gldA gldAp5 Sigma38 0 4137170 4137177 CCTGCCCT 4137164 4.31 good homology 0.002133482 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcacCCTGCCCTtagatGtagcg 4135955 4137058 R gldA gldAp6 Sigma38 0 4137281 4137288 GCTGCAAA 4137276 4.44 high homology 0.001836305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggaGCTGCAAAcgctGttaga 4135955 4137058 R gldA gldAp7 Sigma38 0 4137088 4137095 GCCGCATT 4137083 4.72 high homology 0.001320163 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggaatGCCGCATTtggcActact 4135955 4137058 R gldA gldAp8 Sigma38 0 4137206 4137213 GCTGGACT 4137201 5.64 high homology 0.000338834 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggcGCTGGACTgtttActggc 4145489 4146340 R yijO yijOp3 Sigma38 0 4146520 4146527 GCGACGCT 4146515 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cggatGCGACGCTtgacGcgtct 4145489 4146340 R yijO yijOp4 Sigma38 0 4146355 4146362 TCTACATA 4146349 4.34 good homology 0.002112253 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcccgTCTACATAcctaaGggaat 4145489 4146340 R yijO yijOp6 Sigma38 0 4146406 4146413 GCCACACT 4146400 5.6 high homology 0.000349153 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcagGCCACACTtttcaGgtggc 4146555 4148288 R yijP yijPp3 Sigma38 0 4148310 4148317 GCGATATT 4148304 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attcgGCGATATTttttcAagaca 4146555 4148288 R yijP yijPp4 Sigma38 0 4148340 4148347 GATATCCT 4148334 3.04 poor homology 0.008312457 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttcaGATATCCTtaaggAattgt 4146555 4148288 R yijP yijPp6 Sigma38 0 4148350 4148357 TATACCTT 4148344 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgaaTATACCTTcagatAtcctt 4146555 4148288 R yijP yijPp7 Sigma38 0 4148467 4148474 GCTAATCT 4148461 3.4 poor homology 0.00591656 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taccgGCTAATCTtcctcTtctgc 4146555 4148288 R yijP yijPp10 Sigma38 0 4148320 4148327 GTTACATT 4148314 4.01 good homology 0.003119758 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtcGTTACATTcggcgAtattt 4159147 4159794 F fabR fabRp5 Sigma38 0 4158975 4158982 GATACTCT 4158989 3.36 poor homology 0.00615802 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgacGATACTCTccgtttAagcgg 4170080 4171108 F murB murBp1 Sigma38 0 4169931 4169938 CATAAACT 4169944 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cccgcCATAAACTgccagGcatca 4170080 4171108 F murB murBp3 Sigma38 0 4169963 4169970 GCCATCCT 4169976 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaagGCCATCCTgacggAtggcc 4170080 4171108 F murB murBp4 Sigma38 0 4170048 4170055 ACTAGCCT 4170062 3.14 poor homology 0.007750484 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtaaACTAGCCTcgttttTgcatc 4170080 4171108 F murB murBp5 Sigma38 0 4169992 4169999 TCTACAAA 4170005 4.02 good homology 0.003088715 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgttTCTACAAActcttCctgtc 4194926 4195699 F nudC nudCp3 Sigma38 0 4194706 4194713 GCCAGGCT 4194718 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctttGCCAGGCTtaatGccaac 4197527 4198117 F yjaG yjaGp3 Sigma38 0 4197462 4197469 GCTATACA 4197474 4.07 good homology 0.002938077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtgcGCTATACAgcaaAtcagc 4218324 4220510 R arpA arpAp5 Sigma38 0 4220737 4220744 GCCAAAAT 4220731 3.23 poor homology 0.007372488 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgacGCCAAAATaacttAatgtc 4218324 4220510 R arpA arpAp6 Sigma38 0 4220719 4220726 CATACACT 4220714 4.16 good homology 0.002554241 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatgtCATACACTtcacAcactt 4229382 4229654 R yjbD yjbDp4 Sigma38 0 4229849 4229856 ACTATGCT 4229843 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgtcACTATGCTcatcaAtaaac 4229382 4229654 R yjbD yjbDp6 Sigma38 0 4229881 4229888 GCTATATT 4229876 5.25 high homology 0.000593188 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggaaGCTATATTtcggGccgta 4240649 4241539 R malG malGp4 Sigma38 0 4241621 4241628 GCCACGCT 4241615 4.53 high homology 0.001580522 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caattGCCACGCTgatctTcctgc 4257260 4257469 F yjbJ yjbJp3 Sigma38 0 4257175 4257182 GCCAAATT 4257187 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctaaGCCAAATTgctgActaca 4257260 4257469 F yjbJ yjbJp4 Sigma38 0 4257187 4257194 ACTACACT 4257201 5.47 high homology 0.000405658 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctgACTACACTtaatctCacgtt 4257511 4258026 R zur zurp4 Sigma38 0 4258125 4258132 CCTACAAA 4258119 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccttaCCTACAAAacagaAaatca 4259737 4260729 F dusA dusAp4 Sigma38 0 4259639 4259646 GCTGAATA 4259652 3.18 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtgatGCTGAATAacataAcccca 4259737 4260729 F dusA dusAp5 Sigma38 0 4259667 4259674 GATAAAAT 4259681 3.31 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatcGATAAAATaatctcTacatt 4259737 4260729 F dusA dusAp8 Sigma38 0 4259704 4259711 TCTGAAAT 4259717 3.69 good homology 0.004516581 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaatTCTGAAATgcaaaAaatca 4259737 4260729 F dusA dusAp10 Sigma38 0 4259679 4259686 TCTACATT 4259692 6 high homology 0.000178665 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taatcTCTACATTtgaaaAtgcac 4276502 4277851 F yjcD yjcDp2 Sigma38 0 4276457 4276464 GCCACGCA 4276470 2.87 poor homology 0.010051836 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtccGCCACGCAtcttgAcgaaa 4276502 4277851 F yjcD yjcDp4 Sigma38 0 4276317 4276324 GCTATGAT 4276330 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagccGCTATGATcgccgGataat 4278003 4279652 F yjcE yjcEp2 Sigma38 0 4277843 4277850 GCTATCTA 4277857 2.53 poor homology 0.01343355 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gctggGCTATCTAatctttCatcgg 4278003 4279652 F yjcE yjcEp3 Sigma38 0 4277847 4277854 TCTAATCT 4277861 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggctaTCTAATCTttcatcGgattc 4278003 4279652 F yjcE yjcEp4 Sigma38 0 4277926 4277933 GCGATATT 4277939 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttttGCGATATTctgaaAaaaat 4292504 4293817 F gltP gltPp3 Sigma38 0 4292306 4292313 CATAAACT 4292320 2.58 poor homology 0.012651241 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctgcCATAAACTcgcgttAttatg 4292504 4293817 F gltP gltPp5 Sigma38 0 4292408 4292415 TCTACAAA 4292421 4.02 good homology 0.003088715 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaaaTCTACAAAccaacGcaaca 4294459 4295148 R yjcO yjcOp1 Sigma38 0 4295163 4295170 CCTACCCA 4295157 3.06 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tactcCCTACCCAatcgtAttatc 4297587 4299053 R mdtP mdtPp1 Sigma38 0 4299156 4299163 CCCACCTT 4299150 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctgCCCACCTTattaaAacagg 4297587 4299053 R mdtP mdtPp2 Sigma38 0 4299239 4299246 AATACGCT 4299234 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggagaAATACGCTgccgGtctgg 4297587 4299053 R mdtP mdtPp3 Sigma38 0 4299125 4299132 GCCAGCTT 4299120 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtctGCCAGCTTttcgCccgct 4297587 4299053 R mdtP mdtPp4 Sigma38 0 4299165 4299172 GCCATCCT 4299160 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcagGCCATCCTgcccAcctta 4297587 4299053 R mdtP mdtPp5 Sigma38 0 4299106 4299113 GCCAGACT 4299100 4.34 good homology 0.002091236 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcttGCCAGACTggacaGccccg 4304893 4305822 R alsK alsKp2 Sigma38 0 4306041 4306048 GATAAACT 4306035 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctgGATAAACTtgccgAactga 4312367 4313125 R phnP phnPp1 Sigma38 0 4313325 4313332 GCGAAATT 4313319 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gatcgGCGAAATTcaggaGttggt 4323321 4323764 R yjdN yjdNp1 Sigma38 0 4323808 4323815 TATAAATT 4323803 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atctgTATAAATTtcgaActaca 4323321 4323764 R yjdN yjdNp4 Sigma38 0 4323922 4323929 CCTACAAA 4323916 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcaggCCTACAAAttcccGcaccc 4323321 4323764 R yjdN yjdNp6 Sigma38 0 4323846 4323853 GCGACGCT 4323840 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCGACGCTcgcgcGtctta 4323321 4323764 R yjdN yjdNp7 Sigma38 0 4323946 4323953 GCGACGCT 4323940 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgatGCGACGCTtgcgcGtctta 4323321 4323764 R yjdN yjdNp8 Sigma38 0 4323796 4323803 ACTACACT 4323790 5.47 high homology 0.000405658 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcgaACTACACTtaactGgcttc 4324422 4324757 R yjdM yjdMp4 Sigma38 0 4324865 4324872 TCTAAAAT 4324859 4.1 good homology 0.002851244 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtcgTCTAAAATcagcaGtaccc 4330204 4331295 R basS basSp2 Sigma38 0 4331374 4331381 GCGACAAA 4331369 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tctgcGCGACAAAgtggGcaaag 4330204 4331295 R basS basSp3 Sigma38 0 4331386 4331393 TCCACAAT 4331381 3.98 good homology 0.003247077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcataTCCACAATctgcGcgaca 4331970 4333613 R eptA eptAp2 Sigma38 0 4333659 4333666 GCTTAATT 4333652 2.92 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttgGCTTAATTttgcttTgcgag 4331970 4333613 R eptA eptAp3 Sigma38 0 4333683 4333690 GCCAACCT 4333677 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaaaGCCAACCTtaagaActtaa 4331970 4333613 R eptA eptAp4 Sigma38 0 4333778 4333785 TATGCGCT 4333772 3.37 poor homology 0.005976023 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccatgTATGCGCTgaattAcaacc 4331970 4333613 R eptA eptAp5 Sigma38 0 4333773 4333780 GCTGAATT 4333766 4.84 high homology 0.00117088 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatgcGCTGAATTacaaccGgctac 4331970 4333613 R eptA eptAp6 Sigma38 0 4333758 4333765 GCTACATA 4333753 5.17 high homology 0.000724521 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaccgGCTACATAaaaaCccgta 4333717 4335054 R adiC adiCp8 Sigma38 0 4335164 4335171 GCTATATT 4335159 5.25 high homology 0.000593188 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaagaGCTATATTaataAcggca 4349866 4350096 F yjdI yjdIp3 Sigma38 0 4349834 4349841 GCGATAAT 4349848 2.62 poor homology 0.012155178 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttataGCGATAATcatactGatgag 4349866 4350096 F yjdI yjdIp6 Sigma38 0 4349762 4349769 GCTATATA 4349775 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattgGCTATATAggggaAgagac 4349866 4350096 F yjdI yjdIp7 Sigma38 0 4349822 4349829 GCTATGCT 4349834 4.66 high homology 0.001401797 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgggGCTATGCTtataGcgata 4367179 4368435 R yjeH yjeHp2 Sigma38 0 4368472 4368479 TCTACGCA 4368467 3.74 good homology 0.004086771 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaaaTCTACGCAgttgCccaaa 4367179 4368435 R yjeH yjeHp3 Sigma38 0 4368486 4368493 GCTACCAT 4368480 5.45 high homology 0.000418012 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgtGCTACCATcgaaaAtctac 4371388 4372257 R yjeJ yjeJp3 Sigma38 0 4372300 4372307 TATAAATT 4372293 2.8 poor homology 0.010673407 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctTATAAATTaaaattAattat 4372652 4373680 R yjeK yjeKp1 Sigma38 0 4373767 4373774 TCTAACAT 4373760 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgccgTCTAACATgattttAagacc 4374340 4374465 F ecnA ecnAp1 Sigma38 0 4374112 4374119 GTTGAACT 4374124 2.49 poor homology 0.013842662 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttcGTTGAACTggaaAtcgtt 4374340 4374465 F ecnA ecnAp2 Sigma38 0 4374312 4374319 GCTGCACC 4374324 2.82 poor homology 0.010462059 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcagGCTGCACCatcaCttatt 4374340 4374465 F ecnA ecnAp3 Sigma38 0 4374102 4374109 GCCGAACT 4374115 3.61 good homology 0.004892754 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actccGCCGAACTtcgttGaactg 4374340 4374465 F ecnA ecnAp4 Sigma38 0 4374181 4374188 GCTACCCT 4374193 6.24 high homology 0.000103081 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaccgGCTACCCTgtctActggc 4377030 4377389 R frdD frdDp6 Sigma38 0 4377431 4377438 GCCACCAT 4377426 3.74 good homology 0.004086771 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggttGCCACCATcgtaAtcctg 4381862 4383364 F yjeM yjeMp2 Sigma38 0 4381783 4381790 TTTACGCT 4381795 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggttTTTACGCTgcctGctcaa 4381862 4383364 F yjeM yjeMp4 Sigma38 0 4381727 4381734 GCCACAAT 4381740 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaagGCCACAATttaagActgga 4388480 4389532 R rsgA rsgAp5 Sigma38 0 4389752 4389759 TCGGCCCT 4389745 2.69 poor homology 0.011447316 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatggTCGGCCCTtctgccAgaata 4388480 4389532 R rsgA rsgAp6 Sigma38 0 4389619 4389626 GCTATTTT 4389612 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctcatGCTATTTTccacccAttcac 4388480 4389532 R rsgA rsgAp7 Sigma38 0 4389595 4389602 ACTATATT 4389589 3.41 poor homology 0.005684569 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagtgACTATATTgatccAcaatt 4388480 4389532 R rsgA rsgAp9 Sigma38 0 4389741 4389748 GCCAGAAT 4389735 3.55 good homology 0.005195305 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttctGCCAGAATattcaGgttgg 4388480 4389532 R rsgA rsgAp10 Sigma38 0 4389585 4389592 TCCACAAT 4389579 3.98 good homology 0.003247077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgaTCCACAATtgcgtGtatca 4388480 4389532 R rsgA rsgAp11 Sigma38 0 4389762 4389769 ACTGCAAT 4389756 4.26 good homology 0.002176581 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtgtACTGCAATggtcgGccctt 4389627 4390172 F orn ornp3 Sigma38 0 4389570 4389577 TCTATGAT 4389582 3.03 poor homology 0.00848038 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaacaTCTATGATacacGcaatt 4389627 4390172 F orn ornp4 Sigma38 0 4389404 4389411 GATACCTT 4389417 4.15 good homology 0.002605841 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgacGATACCTTcatcaGgctcg 4402409 4402606 F yjeT yjeTp1 Sigma38 0 4402293 4402300 GCTACATG 4402306 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttccGCTACATGaagacGccgac 4402409 4402606 F yjeT yjeTp3 Sigma38 0 4402200 4402207 TCTACGCA 4402212 3.74 good homology 0.004086771 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggactTCTACGCAttcaTccgta 4402409 4402606 F yjeT yjeTp4 Sigma38 0 4402160 4402167 GCCAAACT 4402172 4.02 good homology 0.003057982 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagcaGCCAAACTgtttGctgat 4414040 4414315 R yjfN yjfNp3 Sigma38 0 4414433 4414440 TTTACATT 4414427 3.18 poor homology 0.007597014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcagcTTTACATTgctttGcgtcc 4414464 4414793 R bsmA bsmAp2 Sigma38 0 4414909 4414916 GCGGTATT 4414903 2.53 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctgGCGGTATTagttcAtaatg 4414464 4414793 R bsmA bsmAp4 Sigma38 0 4414879 4414886 GTTACGCT 4414872 3.42 poor homology 0.005628006 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtggGTTACGCTttcgtcAcgttt 4414975 4415724 F yjfP yjfPp3 Sigma38 0 4414785 4414792 GCTAACCA 4414797 3 poor homology 0.008651695 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcctGCTAACCAtagtGtagtg 4422539 4422814 R yjfY yjfYp3 Sigma38 0 4423017 4423024 GCTAAACT 4423011 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcctcGCTAAACTcaaggGcagag 4424651 4425445 R yjfZ yjfZp3 Sigma38 0 4425545 4425552 GCTATTTT 4425540 2.93 poor homology 0.009466462 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catccGCTATTTTcaccActtca 4424651 4425445 R yjfZ yjfZp4 Sigma38 0 4425475 4425482 GCGATATT 4425469 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cagctGCGATATTtataaAaacat 4426958 4427578 F fklB fklBp1 Sigma38 0 4426885 4426892 GCGACAAA 4426898 2.54 poor homology 0.013299884 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttcccGCGACAAAgttttAcccaa 4426958 4427578 F fklB fklBp2 Sigma38 0 4426916 4426923 GATATGCT 4426928 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggctGATATGCTgcccGctact 4426958 4427578 F fklB fklBp4 Sigma38 0 4426935 4426942 TATACCCT 4426948 3.79 good homology 0.003848776 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tacttTATACCCTaagaaAggaaa 4426958 4427578 F fklB fklBp5 Sigma38 0 4426796 4426803 GCTATGAT 4426808 3.86 good homology 0.003624641 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctaacGCTATGATgtccGtggta 4426958 4427578 F fklB fklBp7 Sigma38 0 4426928 4426935 GCTACTTT 4426942 4.51 high homology 0.001712159 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgcccGCTACTTTatacccTaagaa 4430114 4431079 R ytfF ytfFp2 Sigma38 0 4431205 4431212 GCCATCTT 4431200 2.49 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtaaGCCATCTTtttaAtgtta 4430114 4431079 R ytfF ytfFp3 Sigma38 0 4431238 4431245 GCCACCCA 4431232 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gattgGCCACCCAacgacAacgtt 4430114 4431079 R ytfF ytfFp4 Sigma38 0 4431317 4431324 GATATGCT 4431311 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tggcgGATATGCTggcggAttctg 4431187 4432047 R qorB qorBp6 Sigma38 0 4432143 4432150 GCTAACCT 4432137 4.66 high homology 0.001387849 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacagGCTAACCTgactcAtttca 4432136 4432516 F ytfH ytfHp1 Sigma38 0 4431959 4431966 GCCACTAT 4431973 2.48 poor homology 0.014122302 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgataGCCACTATttggctGgcagg 4432136 4432516 F ytfH ytfHp2 Sigma38 0 4432079 4432086 AATACGCT 4432091 2.77 poor homology 0.010889024 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtttaAATACGCTaacaCctaaa 4432136 4432516 F ytfH ytfHp4 Sigma38 0 4432091 4432098 CCTAAACT 4432105 4.2 good homology 0.002334401 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taacaCCTAAACTtactttTagtaa 4434778 4435518 F cysQ cysQp3 Sigma38 0 4434673 4434680 TTTACGCT 4434686 2.58 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaatTTTACGCTttgaaAatgat 4434778 4435518 F cysQ cysQp5 Sigma38 0 4434665 4434672 GCCACAAT 4434678 4.81 high homology 0.001218664 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agaatGCCACAATtttacGctttg 4434778 4435518 F cysQ cysQp6 Sigma38 0 4434574 4434581 GCTAAACT 4434587 5.73 high homology 0.000271921 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttgcGCTAAACTtaatcAtcagg 4435730 4436668 F ytfI ytfIp2 Sigma38 0 4435694 4435701 GCGACATA 4435707 2.86 poor homology 0.010152858 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taatgGCGACATAaagtaAccaaa 4435730 4436668 F ytfI ytfIp3 Sigma38 0 4435554 4435561 GCCATCCT 4435567 2.96 poor homology 0.009004778 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attctGCCATCCTgatttCtccca 4435730 4436668 F ytfI ytfIp5 Sigma38 0 4435514 4435521 ACTAAATT 4435527 3.41 poor homology 0.0057417 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatttACTAAATTcagatGgcaga 4435730 4436668 F ytfI ytfIp8 Sigma38 0 4435635 4435642 GTTACATT 4435648 4.01 good homology 0.003119758 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aataaGTTACATTttaatAatgag 4437895 4439238 R ytfL ytfLp2 Sigma38 0 4439465 4439472 TCCAAATT 4439460 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatcgTCCAAATTcaatAtattg 4437895 4439238 R ytfL ytfLp5 Sigma38 0 4439477 4439484 CCTACAAA 4439472 3.33 poor homology 0.006473748 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccaggCCTACAAAatcgTccaaa 4437895 4439238 R ytfL ytfLp6 Sigma38 0 4439349 4439356 GCTATACT 4439344 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttacGCTATACTagccActgaa 4440405 4442138 F ytfM ytfMp3 Sigma38 0 4440330 4440337 TCCATATT 4440343 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttaaTCCATATTactggAttttt 4452634 4453632 R fbp fbpp2 Sigma38 0 4453859 4453866 GCCAGCAT 4453853 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcgcGCCAGCATcgccaGaccgc 4452634 4453632 R fbp fbpp5 Sigma38 0 4453694 4453701 GCAACATT 4453687 2.76 poor homology 0.011108997 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgagcGCAACATTgagattAtttgt 4452634 4453632 R fbp fbpp6 Sigma38 0 4453795 4453802 ACTATCCT 4453789 2.82 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgtcACTATCCTtttttAatctg 4452634 4453632 R fbp fbpp7 Sigma38 0 4453830 4453837 GCCACAAA 4453824 3.15 poor homology 0.007673365 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aatgtGCCACAAAttcctAaaata 4452634 4453632 R fbp fbpp8 Sigma38 0 4453820 4453827 CCTAAAAT 4453815 3.41 poor homology 0.00585769 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaattCCTAAAATatgaAtgcgc 4455337 4455888 R yjgA yjgAp2 Sigma38 0 4455923 4455930 TCTTAACT 4455918 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgcaTCTTAACTggtaAcatta 4455337 4455888 R yjgA yjgAp3 Sigma38 0 4456030 4456037 TCCAGAAT 4456024 2.72 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttctTCCAGAATcttgcGctgcg 4455337 4455888 R yjgA yjgAp4 Sigma38 0 4455979 4455986 GCCATAAT 4455973 3.23 poor homology 0.007299131 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caagtGCCATAATgtagaGagttt 4455337 4455888 R yjgA yjgAp10 Sigma38 0 4456017 4456024 GCTGCGCT 4456012 5.82 high homology 0.000193545 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cttgcGCTGCGCTtcaaCttgag 4470837 4471232 R yjgH yjgHp1 Sigma38 0 4471352 4471359 ACTACGCT 4471346 4.39 good homology 0.002009237 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaccgACTACGCTcaattAagccc 4472885 4473337 F tabA tabAp2 Sigma38 0 4472778 4472785 GATAAGTT 4472791 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgccGATAAGTTgtgatAagaca 4477057 4477560 R yjgM yjgMp9 Sigma38 0 4477677 4477684 GTTACAAT 4477670 3.69 good homology 0.004383096 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gccacGTTACAATactcttAtcagt 4477057 4477560 R yjgM yjgMp12 Sigma38 0 4477682 4477689 GCCACGTT 4477676 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gttctGCCACGTTacaatActctt 4477753 4478949 F yjgN yjgNp2 Sigma38 0 4477654 4477661 GCCAGCCT 4477668 3.28 poor homology 0.006737947 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGCCAGCCTattactGataag 4477753 4478949 F yjgN yjgNp5 Sigma38 0 4477588 4477595 TATACATT 4477601 4.38 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaatTATACATTtgtttAatacc 4484241 4485341 F lptF lptFp2 Sigma38 0 4484146 4484153 GCGACGAT 4484158 3.12 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcttaGCGACGATttcgAcgact 4484241 4485341 F lptF lptFp4 Sigma38 0 4484017 4484024 GATAGAAT 4484030 3.63 good homology 0.00484407 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctacaGATAGAATtgcaaGctttc 4484241 4485341 F lptF lptFp8 Sigma38 0 4484198 4484205 GCTAAAAT 4484211 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacaaGCTAAAATcctgcAaaaga 4486584 4488086 R yjgR yjgRp4 Sigma38 0 4488113 4488120 CCTATACT 4488108 4.2 good homology 0.002311173 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgttgCCTATACTccagGcagga 4493213 4494232 R yjgB yjgBp2 Sigma38 0 4494294 4494301 GTCACACT 4494289 2.78 poor homology 0.010780676 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cctttGTCACACTccagGcaccc 4493213 4494232 R yjgB yjgBp3 Sigma38 0 4494361 4494368 GCCAGCTT 4494356 2.81 poor homology 0.010567204 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caagcGCCAGCTTgctcGcacct 4493213 4494232 R yjgB yjgBp4 Sigma38 0 4494270 4494277 GCCATGCT 4494265 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gccctGCCATGCTctacActtcc 4493213 4494232 R yjgB yjgBp7 Sigma38 0 4494375 4494382 GCCACCAT 4494370 3.74 good homology 0.004086771 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcacGCCACCATgcaaGcgcca 4493213 4494232 R yjgB yjgBp10 Sigma38 0 4494263 4494270 TCTACACT 4494257 6.48 high homology 8.03E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catgcTCTACACTtcccaAacaac 4496295 4496660 F insC insCp6 Sigma38 0 4496102 4496109 TATACATT 4496115 4.38 good homology 0.002070428 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atttaTATACATTcaataAaaaag 4500126 4501454 R insG insGp2 Sigma38 0 4501621 4501628 TCCACATA 4501615 2.64 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcaaTCCACATAacaaaAcgcgt 4500126 4501454 R insG insGp5 Sigma38 0 4501662 4501669 TATACCTT 4501657 3.32 poor homology 0.006538811 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttctgTATACCTTtataCctgtt 4502081 4503298 F yjhB yjhBp6 Sigma38 0 4502052 4502059 GCTATATT 4502065 5.25 high homology 0.000593188 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence taaggGCTATATTagaatAacaca 4505489 4506640 R insI insIp4 Sigma38 0 4506715 4506722 GATATATT 4506709 3.63 good homology 0.004748151 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agcgaGATATATTaaaaaAagcaa 4508713 4509480 R fecE fecEp1 Sigma38 0 4509572 4509579 GCGAGAAT 4509566 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctgGCGAGAATtattcAtcccc 4514787 4515740 R fecR fecRp2 Sigma38 0 4515833 4515840 GCGAGATT 4515828 3.26 poor homology 0.007083409 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atacaGCGAGATTgcgcAcaaac 4516550 4516825 F insA insAp2 Sigma38 0 4516504 4516511 GCCAACTT 4516516 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgctGCCAACTTactgAtttag 4516550 4516825 F insA insAp4 Sigma38 0 4516453 4516460 GCTATTAT 4516465 2.6 poor homology 0.012400729 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggtctGCTATTATtgacAtcctc 4516550 4516825 F insA insAp5 Sigma38 0 4516414 4516421 TCTGGCAT 4516427 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgctTCTGGCATgtgtcGgtcag 4516550 4516825 F insA insAp6 Sigma38 0 4516450 4516457 TCTGCTAT 4516463 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtggTCTGCTATtattgAcatcc 4516550 4516825 F insA insAp9 Sigma38 0 4516501 4516508 GCTGCCAA 4516515 3.37 poor homology 0.005976023 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaatGCTGCCAActtactGattta 4516550 4516825 F insA insAp12 Sigma38 0 4516471 4516478 ACTGCCCT 4516484 3.99 good homology 0.003214768 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcctcACTGCCCTaaaggAtgggg 4517361 4518347 R yjhU yjhUp5 Sigma38 0 4518582 4518589 GCGATATT 4518576 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagggGCGATATTgaaccTtcgat 4518694 4520043 R yjhF yjhFp5 Sigma38 0 4520060 4520067 GCTACCCT 4520054 6.24 high homology 0.000103081 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggtcGCTACCCTgttatGagagg 4520150 4522117 R yjhG yjhGp1 Sigma38 0 4522321 4522328 GCGACGCT 4522315 3.92 good homology 0.003413558 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ccgctGCGACGCTgaataAaaaac 4524129 4524911 R sgcR sgcRp2 Sigma38 0 4524950 4524957 GCGACCTT 4524944 3.46 poor homology 0.005461674 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcgcGCGACCTTagctcAattcg 4524129 4524911 R sgcR sgcRp3 Sigma38 0 4524932 4524939 GCCACCCT 4524926 4.54 high homology 0.001564796 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aattcGCCACCCTgtaagAggaga 4531262 4531807 R yjhQ yjhQp3 Sigma38 0 4532045 4532052 CATACCTT 4532040 2.62 poor homology 0.012034232 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aacaaCATACCTTacacGttctc 4535682 4536788 R nanM nanMp3 Sigma38 0 4536976 4536983 GCTATGCA 4536971 2.99 poor homology 0.008738646 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttatcGCTATGCAaaccAtaaga 4535682 4536788 R nanM nanMp5 Sigma38 0 4536886 4536893 ACTACCTT 4536881 3.93 good homology 0.003379593 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgACTACCTTgaccGtcagg 4535682 4536788 R nanM nanMp6 Sigma38 0 4537002 4537009 GCTATACA 4536997 4.07 good homology 0.002938077 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgacGCTATACAgcaaAcagaa 4535682 4536788 R nanM nanMp7 Sigma38 0 4536933 4536940 TCTACAAT 4536927 5.68 high homology 0.000315927 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttgtTCTACAATaccatAtgacg 4553513 4554343 R yjiC yjiCp2 Sigma38 0 4554493 4554500 GATACTTT 4554487 2.88 poor homology 0.009951818 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttttGATACTTTagagtGtttcc 4553513 4554343 R yjiC yjiCp3 Sigma38 0 4554540 4554547 GATATGCT 4554534 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aataaGATATGCTtttaaAttgca 4553513 4554343 R yjiC yjiCp6 Sigma38 0 4554374 4554381 TCTAAACA 4554368 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attttTCTAAACAtcagtGaaata 4553513 4554343 R yjiC yjiCp9 Sigma38 0 4554476 4554483 CCTACCCT 4554470 4.72 high homology 0.001320163 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtttCCTACCCTttaatAtcacc 4555401 4556312 R qseD qseDp2 Sigma38 0 4556506 4556513 GCGAAATT 4556500 2.94 poor homology 0.00937227 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaaagGCGAAATTctgccAggcaa 4555401 4556312 R qseD qseDp3 Sigma38 0 4556440 4556447 TATACGCT 4556435 3.78 good homology 0.003926527 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcaggTATACGCTcgcgGcaaac 4558953 4559507 F kptA kptAp4 Sigma38 0 4558818 4558825 TATGCGTT 4558830 2.9 poor homology 0.009754759 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctggcTATGCGTTttttGcatag 4558953 4559507 F kptA kptAp6 Sigma38 0 4558864 4558871 TCTGCGCA 4558877 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaggcTCTGCGCAggattGagttg 4560766 4561626 R yjiK yjiKp3 Sigma38 0 4561652 4561659 GATATCTT 4561647 2.57 poor homology 0.012906813 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttctcGATATCTTattgAtttgc 4560766 4561626 R yjiK yjiKp4 Sigma38 0 4561850 4561857 GCGATATT 4561845 2.94 poor homology 0.009279014 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtcaGCGATATTccccGtgatt 4560766 4561626 R yjiK yjiKp5 Sigma38 0 4561780 4561787 AATACAAT 4561774 3.05 poor homology 0.008229747 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gaggaAATACAATgggtgAtccct 4560766 4561626 R yjiK yjiKp8 Sigma38 0 4561668 4561675 GCTACGTA 4561662 4.1 good homology 0.002766977 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggtcGCTACGTAtacttCtcgat 4563989 4565269 R yjiN yjiNp1 Sigma38 0 4565340 4565347 GCCAGCAT 4565334 2.48 poor homology 0.013981783 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtgcGCCAGCATcaggcAgccga 4563989 4565269 R yjiN yjiNp2 Sigma38 0 4565277 4565284 TCTATTCT 4565272 2.57 poor homology 0.012778388 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence caggcTCTATTCTtaacGttatg 4563989 4565269 R yjiN yjiNp3 Sigma38 0 4565492 4565499 GCTAAATA 4565486 3.59 good homology 0.00504176 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcatcGCTAAATAtggtgAtcctg 4568185 4569597 R yjiR yjiRp2 Sigma38 0 4569609 4569616 TCCACATA 4569604 2.64 poor homology 0.01191449 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tatggTCCACATAaggaAtacag 4568185 4569597 R yjiR yjiRp6 Sigma38 0 4569733 4569740 TCCACCTT 4569727 3.24 poor homology 0.007154598 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence catcaTCCACCTTctggcAgttca 4569774 4569938 F yjiS yjiSp1 Sigma38 0 4569648 4569655 GCTAAAAA 4569661 3.27 poor homology 0.007012928 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgagGCTAAAAAaccggAtgcag 4574935 4575981 R mcrC mcrCp1 Sigma38 0 4576168 4576175 GCCACTAT 4576162 2.48 poor homology 0.014122302 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aagagGCCACTATccttgGgaaag 4574935 4575981 R mcrC mcrCp2 Sigma38 0 4576165 4576172 ACTATCCT 4576159 2.82 poor homology 0.01035796 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aggccACTATCCTtgggaAaggat 4574935 4575981 R mcrC mcrCp3 Sigma38 0 4576093 4576100 GATACGCA 4576088 2.95 poor homology 0.009095277 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctccgGATACGCAatggCttaat 4585932 4586888 R yjiA yjiAp2 Sigma38 0 4586926 4586933 GCGGCGAT 4586920 2.71 poor homology 0.011333413 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctacgGCGGCGATggtaaAggcgg 4585932 4586888 R yjiA yjiAp4 Sigma38 0 4586907 4586914 TATGCGCT 4586900 3.37 poor homology 0.005976023 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcggTATGCGCTgttgttAatgga 4585932 4586888 R yjiA yjiAp5 Sigma38 0 4587030 4587037 TCCAGACT 4587024 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggcatTCCAGACTacgacAactac 4587152 4589302 R yjiY yjiYp2 Sigma38 0 4589447 4589454 CCTAAAAT 4589442 3.41 poor homology 0.00585769 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acatcCCTAAAATaaccActcag 4591384 4592745 R yjjL yjjLp4 Sigma38 0 4592876 4592883 CCTATGCT 4592871 3.13 poor homology 0.007907054 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcttaCCTATGCTcacaAtcagt 4592960 4593874 R yjjM yjjMp1 Sigma38 0 4594116 4594123 GACAGACT 4594110 2.72 poor homology 0.011220644 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atcccGACAGACTtaattTttatt 4592960 4593874 R yjjM yjjMp2 Sigma38 0 4594057 4594064 TCCAGACT 4594051 3.51 good homology 0.005247518 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgttTCCAGACTaattcTttcgg 4595173 4597464 R opgB opgBp4 Sigma38 0 4597588 4597595 TATAAACT 4597581 3.27 poor homology 0.006943148 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ctgttTATAAACTaattccTaacaa 4595173 4597464 R opgB opgBp5 Sigma38 0 4597551 4597558 ACTAGAAT 4597546 3.41 poor homology 0.005799405 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttgacACTAGAATtgcaGcaata 4597718 4598212 R yjjA yjjAp2 Sigma38 0 4598288 4598295 GCTACCGT 4598282 2.56 poor homology 0.013036528 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggataGCTACCGTagccgGgtaac 4597718 4598212 R yjjA yjjAp3 Sigma38 0 4598392 4598399 GCTGACCA 4598386 2.59 poor homology 0.012525359 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gggatGCTGACCAacagtAatatg 4597718 4598212 R yjjA yjjAp4 Sigma38 0 4598423 4598430 GCCGCTCT 4598416 2.86 poor homology 0.010051836 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgatcGCCGCTCTtcttccAaacgc 4597718 4598212 R yjjA yjjAp5 Sigma38 0 4598229 4598236 GACACAAT 4598224 3.19 poor homology 0.007521422 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence actgcGACACAATtccaCcttga 4597718 4598212 R yjjA yjjAp6 Sigma38 0 4598221 4598228 TCCACCTT 4598215 3.24 poor homology 0.007154598 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaatTCCACCTTgagtaAtgatg 4597718 4598212 R yjjA yjjAp7 Sigma38 0 4598231 4598238 GCGACACA 4598225 3.33 poor homology 0.006409333 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atactGCGACACAattccAccttg 4604102 4604188 R leuV leuVp3 Sigma38 0 4604276 4604283 GCTAGCTT 4604270 4.51 high homology 0.001678256 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacgcGCTAGCTTcaggtGttagt 4604102 4604188 R leuV leuVp4 Sigma38 0 4604391 4604398 GCTAGCTT 4604385 4.51 high homology 0.001678256 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gacgcGCTAGCTTcaggtGttagt 4604692 4605723 R rsmC rsmCp4 Sigma38 0 4605946 4605953 GCCACCAT 4605940 3.74 good homology 0.004086771 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgtttGCCACCATcaccaGacgga 4604692 4605723 R rsmC rsmCp5 Sigma38 0 4605753 4605760 GCTATAAT 4605748 4.93 high homology 0.00096827 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atatgGCTATAATcgccGccagt 4607437 4609026 F prfC prfCp3 Sigma38 0 4607192 4607199 GCGACACT 4607205 4.99 high homology 0.000800719 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ggttgGCGACACTgccgaGtccga 4610151 4610312 F ytjA ytjAp4 Sigma38 0 4610072 4610079 ACCACACT 4610084 3.76 good homology 0.004046107 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtgcACCACACTaaaaAtatcg 4610434 4611507 F yjjU yjjUp5 Sigma38 0 4610308 4610315 CCTAGATT 4610320 4.05 good homology 0.003027555 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acgacCCTAGATTtcagAccatt 4610434 4611507 F yjjU yjjUp6 Sigma38 0 4610241 4610248 GCTAAAAT 4610255 4.93 high homology 0.000997758 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gcgcaGCTAAAATtgtcttTgtcgt 4612703 4613566 R yjjW yjjWp1 Sigma38 0 4613601 4613608 GCAACACT 4613596 3.23 poor homology 0.007226503 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence cgcacGCAACACTcgtaTtctgg 4613538 4615088 R yjjI yjjIp3 Sigma38 0 4615285 4615292 TCTAACAT 4615278 3.03 poor homology 0.008395999 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence agtatTCTAACATctactcCgcaac 4613538 4615088 R yjjI yjjIp5 Sigma38 0 4615258 4615265 GATACACA 4615252 4.02 good homology 0.003027555 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acttcGATACACAtcacaAttaag 4619792 4621123 F yjjJ yjjJp3 Sigma38 0 4619563 4619570 ACTACCTT 4619576 3.93 good homology 0.003379593 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtcagACTACCTTcaacgAcatga 4619792 4621123 F yjjJ yjjJp6 Sigma38 0 4619726 4619733 GCTATACT 4619739 5.73 high homology 0.000251014 p < 0.001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence ttttcGCTATACTtttcaGtgaaa 4621124 4622140 R lplA lplAp1 Sigma38 0 4622361 4622368 CATACGCT 4622356 3.09 poor homology 0.008066787 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence acaccCATACGCTcgccAccgaa 4621124 4622140 R lplA lplAp3 Sigma38 0 4622299 4622306 GCTGCTCT 4622293 4.57 high homology 0.001549226 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgttGCTGCTCTcactgGcaatc 4626878 4628545 R yjjK yjjKp7 Sigma38 0 4628689 4628696 GCTAACCA 4628682 3 poor homology 0.008651695 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttatGCTAACCAgtcattGccgtt 4626878 4628545 R yjjK yjjKp9 Sigma38 0 4628666 4628673 GCCACGTT 4628661 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttacGCCACGTTacggAcactt 4626878 4628545 R yjjK yjjKp11 Sigma38 0 4628595 4628602 GCTACACT 4628589 7.31 high homology 1.34E-05 p < 0.0001 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence aaaagGCTACACTtcgccTttgaa 4628756 4630693 F slt sltp4 Sigma38 0 4628559 4628566 TCTATGTT 4628571 3.35 poor homology 0.00628242 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tcgccTCTATGTTtatcGtgata 4628756 4630693 F slt sltp5 Sigma38 0 4628734 4628741 TTTACACT 4628747 3.66 good homology 0.004607822 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence atgtaTTTACACTtagagGatgcg 4628756 4630693 F slt sltp6 Sigma38 0 4628541 4628548 GCCACGTT 4628555 4.06 good homology 0.00299743 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence attgaGCCACGTTggacttCgcctc 4631256 4631768 R yjjX yjjXp4 Sigma38 0 4631953 4631960 GCCAAGCT 4631947 2.95 poor homology 0.009186686 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence gtaatGCCAAGCTctttgGcacgg 4638425 4638565 F yjjY yjjYp5 Sigma38 0 4638338 4638345 CCTAAATT 4638350 3.73 good homology 0.004211232 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgctaCCTAAATTgccaActaaa 4638425 4638565 F yjjY yjjYp7 Sigma38 0 4638334 4638341 GCTACCTA 4638346 4.11 good homology 0.0026852 p < 0.01 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tgtttGCTACCTAaattGccaac 4638965 4639651 F yjtD yjtDp2 Sigma38 0 4638851 4638858 GCTAAGTA 4638863 2.52 poor homology 0.013568559 p < 0.05 Sigma Factor inferred computationally without human oversight,-10 Box inferred computationally without human oversight weak evidence tttaaGCTAAGTAaaggGctttt