We offer graphic displays of different representations of the complete collection of manually curated regulatory interactions.
Description |
File |
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TF-Gene network. Visualization of all interactions between TFs and regulated genes
(TF-gene, full network). In this transcriptional network, the nodes
represent the TFs and their regulated genes; the edges represent the
relation of the transcription regulation and the arrows indicate a relation
directed from the TFs to the genes they regulate.
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Download File 1. TF-Gene (Full network) |
TF-Operon network.Visualization of interactions between TF and regulated operon (TF-operon).
In this transcriptional network, the nodes represent the TFs and their regulated genes;
the edges represent the relation of the transcription regulation and the arrows indicate a relation directed from the TFs to the operons they regulate.
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Download File 2. TF-Operon |
TF-TF network.Visualization of interactions between Transcription Factors (TF-TF).
In this transcriptional network, the nodes represent the TFs and the edges are the physical interactions between them.
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Download File 3. TF-TF |
Sigma-Gene network.Visualization of interactions between sigma factors and regulated genes (Sigma-gene).
In this transcriptional network, the nodes represent the sigma factors and the genes expressed by each factor;
the edges represent the relation of the sigma factors and their expressed genes and arrows indicate a relation directed from
the sigma factors to the genes they expressed.
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Download File 5. Sigma-Gene |
Sigma-Operon network.Visualization of interactions between sigma factors and regulated operons (Sigma-operon).
In this transcriptional network, the nodes represent the sigma factors and the operons expressed by each factor;
the edges represent the relation of the sigma factors and their expressed operons and arrows indicate a relation directed from
the sigma factors to the genes they expressed.
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Download File 6. Sigma-Operon |